Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 SCARNA17.3-201ENST00000516381 125 ntBASIC0.25□□□□□ -2.37
VPS4BO75351 MIR6759-201ENST00000638110 65 ntBASIC0.25□□□□□ -2.37
VPS4BO75351 RNU6-154P-201ENST00000384306 106 ntBASIC0.24□□□□□ -2.37
VPS4BO75351 MIR516B1-201ENST00000385211 90 ntBASIC0.24□□□□□ -2.37
VPS4BO75351 MIR548H2-201ENST00000408874 88 ntBASIC0.24□□□□□ -2.37
VPS4BO75351 Y_RNA.12-201ENST00000362393 112 ntBASIC0.23□□□□□ -2.37
VPS4BO75351 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.23□□□□□ -2.37
VPS4BO75351 MIR1245B-201ENST00000636115 69 ntBASIC0.23□□□□□ -2.37
VPS4BO75351 MIR4636-201ENST00000582271 80 ntBASIC0.22□□□□□ -2.37
VPS4BO75351 MIR5093-201ENST00000583199 100 ntBASIC0.22□□□□□ -2.37
VPS4BO75351 MIR4743-201ENST00000584576 69 ntBASIC0.22□□□□□ -2.37
VPS4BO75351 AC084368.1-201ENST00000620935 65 ntBASIC0.22□□□□□ -2.37
VPS4BO75351 RNU6-681P-201ENST00000364012 104 ntBASIC0.21□□□□□ -2.38
VPS4BO75351 SNORD114-29-201ENST00000364819 70 ntBASIC0.21□□□□□ -2.38
VPS4BO75351 RNA5SP173-201ENST00000364857 136 ntBASIC0.21□□□□□ -2.38
VPS4BO75351 SNORA75.1-201ENST00000391130 148 ntBASIC0.21□□□□□ -2.38
VPS4BO75351 AC074348.1-201ENST00000426503 132 ntBASIC0.21□□□□□ -2.38
VPS4BO75351 AC244090.1-201ENST00000441884 93 ntBASIC0.21□□□□□ -2.38
VPS4BO75351 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.21□□□□□ -2.38
VPS4BO75351 MIR4773-1-201ENST00000637203 78 ntBASIC0.21□□□□□ -2.38
VPS4BO75351 MIR20A-201ENST00000362279 71 ntBASIC0.2□□□□□ -2.38
VPS4BO75351 Y_RNA.371-201ENST00000365591 113 ntBASIC0.2□□□□□ -2.38
VPS4BO75351 RNU6-752P-201ENST00000516376 102 ntBASIC0.2□□□□□ -2.38
VPS4BO75351 RNU6-303P-201ENST00000517091 106 ntBASIC0.2□□□□□ -2.38
VPS4BO75351 MIR6718-201ENST00000616153 80 ntBASIC0.2□□□□□ -2.38
VPS4BO75351 RNU6-1039P-201ENST00000383931 107 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 RNU6-274P-201ENST00000459566 107 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 RNU7-188P-201ENST00000517063 64 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 SCARNA11.2-201ENST00000517183 154 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 MIR5589-201ENST00000579442 60 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 MIR5190-201ENST00000581537 80 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 MIR4712-201ENST00000583750 82 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 MIR3202-2-201ENST00000635980 79 ntBASIC0.19□□□□□ -2.38
VPS4BO75351 Y_RNA.94-201ENST00000363068 106 ntBASIC0.18□□□□□ -2.38
VPS4BO75351 Y_RNA.219-201ENST00000364232 113 ntBASIC0.18□□□□□ -2.38
VPS4BO75351 RNU6-573P-201ENST00000383938 106 ntBASIC0.18□□□□□ -2.38
VPS4BO75351 Y_RNA.532-201ENST00000384590 113 ntBASIC0.18□□□□□ -2.38
VPS4BO75351 RNU6-175P-201ENST00000516896 107 ntBASIC0.18□□□□□ -2.38
VPS4BO75351 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.18□□□□□ -2.38
VPS4BO75351 SNORD114-9-201ENST00000364370 72 ntBASIC0.17□□□□□ -2.38
VPS4BO75351 Y_RNA.313-201ENST00000365095 103 ntBASIC0.17□□□□□ -2.38
VPS4BO75351 MIR106A-201ENST00000384870 81 ntBASIC0.17□□□□□ -2.38
VPS4BO75351 MIR892B-201ENST00000401279 77 ntBASIC0.17□□□□□ -2.38
VPS4BO75351 SNORA40.17-201ENST00000517256 115 ntBASIC0.17□□□□□ -2.38
VPS4BO75351 RN7SL660P-201ENST00000614852 299 ntBASIC0.17□□□□□ -2.38
VPS4BO75351 RNA5SP214-201ENST00000363378 118 ntBASIC0.16□□□□□ -2.38
VPS4BO75351 MIR582-201ENST00000365731 98 ntBASIC0.16□□□□□ -2.38
VPS4BO75351 MIR643-201ENST00000385267 97 ntBASIC0.16□□□□□ -2.38
VPS4BO75351 MIR548E-201ENST00000408287 88 ntBASIC0.16□□□□□ -2.38
VPS4BO75351 AC104408.1-201ENST00000605241 170 ntBASIC0.16□□□□□ -2.38
VPS4BO75351 MIR1297-201ENST00000637311 77 ntBASIC0.16□□□□□ -2.38
VPS4BO75351 RNU6-260P-201ENST00000384092 107 ntBASIC0.15□□□□□ -2.39
VPS4BO75351 MIR610-201ENST00000385139 96 ntBASIC0.15□□□□□ -2.39
VPS4BO75351 RNU6-380P-201ENST00000410207 107 ntBASIC0.15□□□□□ -2.39
VPS4BO75351 RNU6-180P-201ENST00000516697 61 ntBASIC0.15□□□□□ -2.39
VPS4BO75351 MIR4768-201ENST00000585270 74 ntBASIC0.15□□□□□ -2.39
VPS4BO75351 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.14□□□□□ -2.39
VPS4BO75351 Y_RNA.185-201ENST00000363894 100 ntBASIC0.14□□□□□ -2.39
VPS4BO75351 MIR1295A-201ENST00000408463 79 ntBASIC0.14□□□□□ -2.39
VPS4BO75351 AL691482.2-201ENST00000457453 84 ntBASIC0.14□□□□□ -2.39
VPS4BO75351 RNU6-1094P-201ENST00000362416 104 ntBASIC0.13□□□□□ -2.39
VPS4BO75351 RNU6-990P-201ENST00000364385 104 ntBASIC0.13□□□□□ -2.39
VPS4BO75351 SNORA72.7-201ENST00000516349 94 ntBASIC0.13□□□□□ -2.39
VPS4BO75351 MIR4802-201ENST00000581881 80 ntBASIC0.13□□□□□ -2.39
VPS4BO75351 MIR6509-201ENST00000614603 85 ntBASIC0.13□□□□□ -2.39
VPS4BO75351 MIR371B-201ENST00000638082 66 ntBASIC0.13□□□□□ -2.39
VPS4BO75351 SNORD2-201ENST00000459163 69 ntBASIC0.12□□□□□ -2.39
VPS4BO75351 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.12□□□□□ -2.39
VPS4BO75351 MIR3657-201ENST00000584818 117 ntBASIC0.12□□□□□ -2.39
VPS4BO75351 RNU6-228P-201ENST00000362700 106 ntBASIC0.11□□□□□ -2.39
VPS4BO75351 SNORA2.1-201ENST00000363089 137 ntBASIC0.11□□□□□ -2.39
VPS4BO75351 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
VPS4BO75351 Y_RNA.633-201ENST00000459107 95 ntBASIC0.11□□□□□ -2.39
VPS4BO75351 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.11□□□□□ -2.39
VPS4BO75351 RNU6-807P-201ENST00000516805 107 ntBASIC0.11□□□□□ -2.39
VPS4BO75351 CR383656.4-201ENST00000546909 122 ntBASIC0.11□□□□□ -2.39
VPS4BO75351 RNA5SP98-201ENST00000363158 137 ntBASIC0.1□□□□□ -2.39
VPS4BO75351 Y_RNA.250-201ENST00000364542 110 ntBASIC0.1□□□□□ -2.39
VPS4BO75351 RNU6-1124P-201ENST00000384169 107 ntBASIC0.1□□□□□ -2.39
VPS4BO75351 SNORA49-201ENST00000386157 136 ntBASIC0.1□□□□□ -2.39
VPS4BO75351 SNORD78.1-201ENST00000390866 65 ntBASIC0.1□□□□□ -2.39
VPS4BO75351 RNU7-165P-201ENST00000458864 60 ntBASIC0.1□□□□□ -2.39
VPS4BO75351 MIR148A-201ENST00000362215 68 ntBASIC0.09□□□□□ -2.4
VPS4BO75351 SNORA63.6-201ENST00000364921 119 ntBASIC0.09□□□□□ -2.4
VPS4BO75351 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.4
VPS4BO75351 RNU6-330P-201ENST00000363015 107 ntBASIC0.08□□□□□ -2.4
VPS4BO75351 MIR593-201ENST00000384856 100 ntBASIC0.08□□□□□ -2.4
VPS4BO75351 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
VPS4BO75351 RNU6-279P-201ENST00000391297 101 ntBASIC0.07□□□□□ -2.4
VPS4BO75351 RNA5SP163-201ENST00000410304 99 ntBASIC0.07□□□□□ -2.4
VPS4BO75351 snoU13.19-201ENST00000459148 104 ntBASIC0.07□□□□□ -2.4
VPS4BO75351 MIR3675-201ENST00000583661 73 ntBASIC0.07□□□□□ -2.4
VPS4BO75351 MIR6514-201ENST00000622549 70 ntBASIC0.07□□□□□ -2.4
VPS4BO75351 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.07□□□□□ -2.4
VPS4BO75351 MIR203A-201ENST00000384836 110 ntBASIC0.06□□□□□ -2.4
VPS4BO75351 MIR1255A-201ENST00000408338 113 ntBASIC0.06□□□□□ -2.4
VPS4BO75351 AC145423.2-201ENST00000610631 239 ntBASIC0.06□□□□□ -2.4
VPS4BO75351 AL627230.5-201ENST00000619807 58 ntBASIC0.06□□□□□ -2.4
VPS4BO75351 RNU6-1036P-201ENST00000383959 104 ntBASIC0.05□□□□□ -2.4
VPS4BO75351 RNU7-159P-201ENST00000459284 62 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 222.1 ms