Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 RNU6-196P-201ENST00000384315 107 ntBASIC-1.5□□□□□ -2.65
NPHP4O75161 AC006254.2-201ENST00000603259 279 ntBASIC-1.5□□□□□ -2.65
NPHP4O75161 MIR6509-201ENST00000614603 85 ntBASIC-1.5□□□□□ -2.65
NPHP4O75161 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.51□□□□□ -2.65
NPHP4O75161 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.51□□□□□ -2.65
NPHP4O75161 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.51□□□□□ -2.65
NPHP4O75161 MTATP6P29-201ENST00000415057 132 ntBASIC-1.51□□□□□ -2.65
NPHP4O75161 RNU6-62P-201ENST00000516526 102 ntBASIC-1.51□□□□□ -2.65
NPHP4O75161 RNU6-824P-201ENST00000363724 104 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 RNU6-200P-201ENST00000364743 107 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 MIR548I1-201ENST00000408810 149 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 RNU6-795P-201ENST00000516323 103 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 CYP3A54P-201ENST00000566950 75 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 MIR4679-2-201ENST00000578358 77 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 MIR3144-201ENST00000579460 79 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 MIR1246-201ENST00000636535 73 ntBASIC-1.52□□□□□ -2.65
NPHP4O75161 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.53□□□□□ -2.65
NPHP4O75161 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.53□□□□□ -2.65
NPHP4O75161 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.53□□□□□ -2.65
NPHP4O75161 RNU6-772P-201ENST00000516042 105 ntBASIC-1.53□□□□□ -2.65
NPHP4O75161 RNU6-426P-201ENST00000516464 97 ntBASIC-1.53□□□□□ -2.65
NPHP4O75161 AC004792.1-201ENST00000614523 137 ntBASIC-1.53□□□□□ -2.65
NPHP4O75161 MIR4777-201ENST00000583710 86 ntBASIC-1.54□□□□□ -2.66
NPHP4O75161 MIR3657-201ENST00000584818 117 ntBASIC-1.54□□□□□ -2.66
NPHP4O75161 AL157777.2-201ENST00000258070 137 ntBASIC-1.55□□□□□ -2.66
NPHP4O75161 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.55□□□□□ -2.66
NPHP4O75161 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.55□□□□□ -2.66
NPHP4O75161 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.55□□□□□ -2.66
NPHP4O75161 MIR5009-201ENST00000578736 100 ntBASIC-1.55□□□□□ -2.66
NPHP4O75161 RNU6-119P-201ENST00000364882 107 ntBASIC-1.56□□□□□ -2.66
NPHP4O75161 RNU6-746P-201ENST00000384112 109 ntBASIC-1.56□□□□□ -2.66
NPHP4O75161 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.56□□□□□ -2.66
NPHP4O75161 MTND5P41-201ENST00000517498 206 ntBASIC-1.56□□□□□ -2.66
NPHP4O75161 RNU6-379P-201ENST00000363813 104 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 MTND4LP9-201ENST00000427694 174 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 AL691482.2-201ENST00000457453 84 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 SNORD63.1-201ENST00000516178 80 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 AC012531.4-201ENST00000616509 177 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 RNU6-924P-201ENST00000362926 108 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 RNU6-388P-201ENST00000517012 105 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 RNU6-389P-201ENST00000517048 105 ntBASIC-1.57□□□□□ -2.66
NPHP4O75161 SNORA2.1-201ENST00000363089 137 ntBASIC-1.58□□□□□ -2.66
NPHP4O75161 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.58□□□□□ -2.66
NPHP4O75161 RNU7-107P-201ENST00000459121 61 ntBASIC-1.58□□□□□ -2.66
NPHP4O75161 RNU5F-1-201ENST00000362507 117 ntBASIC-1.59□□□□□ -2.66
NPHP4O75161 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.59□□□□□ -2.66
NPHP4O75161 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.6□□□□□ -2.67
NPHP4O75161 RNU7-134P-201ENST00000458997 64 ntBASIC-1.6□□□□□ -2.67
NPHP4O75161 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.61□□□□□ -2.67
NPHP4O75161 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.61□□□□□ -2.67
NPHP4O75161 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.62□□□□□ -2.67
NPHP4O75161 SNORA26.4-201ENST00000391188 123 ntBASIC-1.62□□□□□ -2.67
NPHP4O75161 HLA-S-202ENST00000425174 53 ntBASIC-1.62□□□□□ -2.67
NPHP4O75161 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.62□□□□□ -2.67
NPHP4O75161 AC026421.1-201ENST00000519101 163 ntBASIC-1.62□□□□□ -2.67
NPHP4O75161 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.63□□□□□ -2.67
NPHP4O75161 MIR519A2-201ENST00000384990 87 ntBASIC-1.63□□□□□ -2.67
NPHP4O75161 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.64□□□□□ -2.67
NPHP4O75161 SNORD115-33-201ENST00000363723 82 ntBASIC-1.64□□□□□ -2.67
NPHP4O75161 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.64□□□□□ -2.67
NPHP4O75161 SNORD58A-201ENST00000383875 65 ntBASIC-1.64□□□□□ -2.67
NPHP4O75161 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.64□□□□□ -2.67
NPHP4O75161 SNORD115-22-201ENST00000364456 82 ntBASIC-1.65□□□□□ -2.67
NPHP4O75161 MIR521-2-201ENST00000384818 87 ntBASIC-1.65□□□□□ -2.67
NPHP4O75161 RNU6-732P-201ENST00000516033 103 ntBASIC-1.65□□□□□ -2.67
NPHP4O75161 AC138207.3-201ENST00000585289 166 ntBASIC-1.65□□□□□ -2.67
NPHP4O75161 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.66□□□□□ -2.67
NPHP4O75161 RNU2-51P-201ENST00000410708 197 ntBASIC-1.66□□□□□ -2.67
NPHP4O75161 Y_RNA.204-201ENST00000364112 102 ntBASIC-1.66□□□□□ -2.68
NPHP4O75161 RNU6-463P-201ENST00000384340 107 ntBASIC-1.66□□□□□ -2.68
NPHP4O75161 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.66□□□□□ -2.68
NPHP4O75161 SNORA19.1-201ENST00000410656 129 ntBASIC-1.66□□□□□ -2.68
NPHP4O75161 SNORD33.1-201ENST00000516213 88 ntBASIC-1.66□□□□□ -2.68
NPHP4O75161 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.66□□□□□ -2.68
NPHP4O75161 U6.81-201ENST00000612550 106 ntBASIC-1.66□□□□□ -2.68
NPHP4O75161 SNORA40-201ENST00000388090 126 ntBASIC-1.67□□□□□ -2.68
NPHP4O75161 RNU6-257P-201ENST00000410238 98 ntBASIC-1.67□□□□□ -2.68
NPHP4O75161 RNU4-61P-201ENST00000411243 107 ntBASIC-1.67□□□□□ -2.68
NPHP4O75161 RNU6-518P-201ENST00000516056 96 ntBASIC-1.67□□□□□ -2.68
NPHP4O75161 RNU6-479P-201ENST00000516348 105 ntBASIC-1.67□□□□□ -2.68
NPHP4O75161 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.67□□□□□ -2.68
NPHP4O75161 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.68□□□□□ -2.68
NPHP4O75161 MIR4796-201ENST00000580742 81 ntBASIC-1.68□□□□□ -2.68
NPHP4O75161 MIR6818-201ENST00000621576 65 ntBASIC-1.68□□□□□ -2.68
NPHP4O75161 AC132825.6-201ENST00000638861 357 ntBASIC-1.68□□□□□ -2.68
NPHP4O75161 MIR8485-201ENST00000401372 91 ntBASIC-1.69□□□□□ -2.68
NPHP4O75161 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.69□□□□□ -2.68
NPHP4O75161 RNU7-154P-201ENST00000516194 62 ntBASIC-1.69□□□□□ -2.68
NPHP4O75161 MIR548A3-201ENST00000385297 97 ntBASIC-1.7□□□□□ -2.68
NPHP4O75161 RNU6-972P-201ENST00000391208 107 ntBASIC-1.7□□□□□ -2.68
NPHP4O75161 RNU6-887P-201ENST00000410660 100 ntBASIC-1.7□□□□□ -2.68
NPHP4O75161 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.7□□□□□ -2.68
NPHP4O75161 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.7□□□□□ -2.68
NPHP4O75161 RNU6-971P-201ENST00000516920 106 ntBASIC-1.7□□□□□ -2.68
NPHP4O75161 MIR3914-2-201ENST00000637339 95 ntBASIC-1.7□□□□□ -2.68
NPHP4O75161 SCARNA23-201ENST00000516060 130 ntBASIC-1.71□□□□□ -2.68
Retrieved 100 of 98,524 protein–RNA pairs in 181.6 ms