Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MIR4473-201ENST00000583731 91 ntBASIC0.56□□□□□ -2.32
SMAD6O43541 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
SMAD6O43541 SNORD118-201ENST00000363593 134 ntBASIC0.55□□□□□ -2.32
SMAD6O43541 SNORA25.4-201ENST00000363666 124 ntBASIC0.55□□□□□ -2.32
SMAD6O43541 MIR598-201ENST00000384868 97 ntBASIC0.55□□□□□ -2.32
SMAD6O43541 MIR92A1-201ENST00000385233 78 ntBASIC0.55□□□□□ -2.32
SMAD6O43541 MIR652-201ENST00000385278 98 ntBASIC0.55□□□□□ -2.32
SMAD6O43541 SNORA40.8-201ENST00000411034 126 ntBASIC0.55□□□□□ -2.32
SMAD6O43541 uc_338.17-201ENST00000619633 179 ntBASIC0.55□□□□□ -2.32
SMAD6O43541 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
SMAD6O43541 SNORA2.1-201ENST00000363089 137 ntBASIC0.54□□□□□ -2.32
SMAD6O43541 MIR936-201ENST00000401264 98 ntBASIC0.54□□□□□ -2.32
SMAD6O43541 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
SMAD6O43541 Y_RNA.407-201ENST00000383986 113 ntBASIC0.53□□□□□ -2.32
SMAD6O43541 HMGN2P22-201ENST00000427588 175 ntBASIC0.53□□□□□ -2.32
SMAD6O43541 RNU6-229P-201ENST00000516614 102 ntBASIC0.53□□□□□ -2.32
SMAD6O43541 MIR4511-201ENST00000582784 87 ntBASIC0.53□□□□□ -2.32
SMAD6O43541 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.53□□□□□ -2.32
SMAD6O43541 SNORD114-4-201ENST00000363962 75 ntBASIC0.52□□□□□ -2.33
SMAD6O43541 MIR518A1-201ENST00000385068 85 ntBASIC0.52□□□□□ -2.33
SMAD6O43541 MIR548E-201ENST00000408287 88 ntBASIC0.52□□□□□ -2.33
SMAD6O43541 RNA5SP193-201ENST00000410353 107 ntBASIC0.52□□□□□ -2.33
SMAD6O43541 SNORD71-201ENST00000411292 86 ntBASIC0.52□□□□□ -2.33
SMAD6O43541 MIR6739-201ENST00000622461 75 ntBASIC0.52□□□□□ -2.33
SMAD6O43541 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
SMAD6O43541 RNU6-668P-201ENST00000364180 107 ntBASIC0.51□□□□□ -2.33
SMAD6O43541 Y_RNA.375-201ENST00000365625 101 ntBASIC0.51□□□□□ -2.33
SMAD6O43541 MIR7-2-201ENST00000384970 110 ntBASIC0.51□□□□□ -2.33
SMAD6O43541 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
SMAD6O43541 Y_RNA.633-201ENST00000459107 95 ntBASIC0.51□□□□□ -2.33
SMAD6O43541 SNORA33.1-201ENST00000364957 130 ntBASIC0.5□□□□□ -2.33
SMAD6O43541 Y_RNA.423-201ENST00000384057 113 ntBASIC0.5□□□□□ -2.33
SMAD6O43541 Y_RNA.540-201ENST00000384638 111 ntBASIC0.5□□□□□ -2.33
SMAD6O43541 SCARNA17.3-201ENST00000516381 125 ntBASIC0.5□□□□□ -2.33
SMAD6O43541 MIR4711-201ENST00000578274 70 ntBASIC0.5□□□□□ -2.33
SMAD6O43541 MIR5706-201ENST00000579841 80 ntBASIC0.5□□□□□ -2.33
SMAD6O43541 AC090617.8-201ENST00000623339 167 ntBASIC0.5□□□□□ -2.33
SMAD6O43541 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
SMAD6O43541 SNORD114-26-201ENST00000363543 72 ntBASIC0.49□□□□□ -2.33
SMAD6O43541 RNU6-945P-201ENST00000383947 107 ntBASIC0.49□□□□□ -2.33
SMAD6O43541 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
SMAD6O43541 SNORA75.1-201ENST00000391130 148 ntBASIC0.49□□□□□ -2.33
SMAD6O43541 AC110620.1-201ENST00000416042 228 ntBASIC0.49□□□□□ -2.33
SMAD6O43541 MTND4LP1-201ENST00000446263 157 ntBASIC0.49□□□□□ -2.33
SMAD6O43541 AC021146.9-201ENST00000512503 156 ntBASIC0.49□□□□□ -2.33
SMAD6O43541 MIR6755-201ENST00000619993 66 ntBASIC0.49□□□□□ -2.33
SMAD6O43541 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.49□□□□□ -2.33
SMAD6O43541 SNORA2A-201ENST00000383885 135 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 MIR521-2-201ENST00000384818 87 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 RNA5SP299-201ENST00000391203 116 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 RNU6-1089P-201ENST00000516473 104 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 MIR548V-201ENST00000584165 80 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 uc_338.10-201ENST00000621872 182 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 AC243829.3-201ENST00000622177 108 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 AC103706.3-201ENST00000636297 85 ntBASIC0.48□□□□□ -2.33
SMAD6O43541 Y_RNA.125-201ENST00000363371 111 ntBASIC0.47□□□□□ -2.33
SMAD6O43541 RNA5SP192-201ENST00000364404 120 ntBASIC0.46□□□□□ -2.34
SMAD6O43541 SNORA63.6-201ENST00000364921 119 ntBASIC0.46□□□□□ -2.34
SMAD6O43541 MIR633-201ENST00000384821 98 ntBASIC0.46□□□□□ -2.34
SMAD6O43541 SNORA49-201ENST00000386157 136 ntBASIC0.46□□□□□ -2.34
SMAD6O43541 AC114737.2-201ENST00000421583 173 ntBASIC0.46□□□□□ -2.34
SMAD6O43541 RNA5SP480-201ENST00000516840 109 ntBASIC0.46□□□□□ -2.34
SMAD6O43541 U2.7-201ENST00000619197 100 ntBASIC0.46□□□□□ -2.34
SMAD6O43541 MIR630-201ENST00000384957 97 ntBASIC0.45□□□□□ -2.34
SMAD6O43541 MIR501-201ENST00000390204 84 ntBASIC0.45□□□□□ -2.34
SMAD6O43541 MIR760-201ENST00000390220 80 ntBASIC0.45□□□□□ -2.34
SMAD6O43541 SCARNA21.1-201ENST00000515996 128 ntBASIC0.45□□□□□ -2.34
SMAD6O43541 RNU6-542P-201ENST00000516405 103 ntBASIC0.45□□□□□ -2.34
SMAD6O43541 U4.4-201ENST00000620626 117 ntBASIC0.45□□□□□ -2.34
SMAD6O43541 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.44□□□□□ -2.34
SMAD6O43541 Y_RNA.250-201ENST00000364542 110 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 RNU6-669P-201ENST00000365575 107 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 MIR548C-201ENST00000384815 97 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 MIR516B1-201ENST00000385211 90 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 RNU6-1246P-201ENST00000391064 107 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 RNU7-174P-201ENST00000516248 59 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 RNU6-175P-201ENST00000516896 107 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 U7.6-201ENST00000610841 64 ntBASIC0.44□□□□□ -2.34
SMAD6O43541 SNORD44.1-201ENST00000363202 61 ntBASIC0.43□□□□□ -2.34
SMAD6O43541 SNORA25.5-201ENST00000363782 126 ntBASIC0.43□□□□□ -2.34
SMAD6O43541 RNU6-1162P-201ENST00000384443 104 ntBASIC0.43□□□□□ -2.34
SMAD6O43541 MIR216A-201ENST00000385063 110 ntBASIC0.43□□□□□ -2.34
SMAD6O43541 SNORA68.3-201ENST00000515906 83 ntBASIC0.43□□□□□ -2.34
SMAD6O43541 RNU7-188P-201ENST00000517063 64 ntBASIC0.43□□□□□ -2.34
SMAD6O43541 MIR4677-201ENST00000584153 80 ntBASIC0.43□□□□□ -2.34
SMAD6O43541 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.43□□□□□ -2.34
SMAD6O43541 RNA5SP215-201ENST00000363440 122 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 RNU6-499P-201ENST00000365615 107 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 RNU6-337P-201ENST00000391243 106 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.42□□□□□ -2.34
SMAD6O43541 RNU6-848P-201ENST00000515948 107 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 RNU6-617P-201ENST00000516147 107 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 RNU6-473P-201ENST00000516164 107 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 RNU6-1049P-201ENST00000516414 107 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 MIR548AG1-201ENST00000579932 66 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 RN7SL793P-201ENST00000583259 296 ntBASIC0.42□□□□□ -2.34
SMAD6O43541 RNU6-446P-201ENST00000362827 106 ntBASIC0.41□□□□□ -2.34
SMAD6O43541 RNU6-1079P-201ENST00000362861 110 ntBASIC0.41□□□□□ -2.34
SMAD6O43541 RNA5SP128-201ENST00000365305 116 ntBASIC0.41□□□□□ -2.34
SMAD6O43541 RNU7-129P-201ENST00000516128 62 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms