Protein–RNA interactions for Protein: O43186

CRX, Cone-rod homeobox protein, humanhuman

Predicted RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRXO43186 MIR548I1-201ENST00000408810 149 ntBASIC-1.83□□□□□ -2.7
CRXO43186 AL021921.1-201ENST00000442774 93 ntBASIC-1.83□□□□□ -2.7
CRXO43186 RNU7-197P-201ENST00000458836 62 ntBASIC-1.83□□□□□ -2.7
CRXO43186 RNU6-518P-201ENST00000516056 96 ntBASIC-1.83□□□□□ -2.7
CRXO43186 RNU6-980P-201ENST00000516925 103 ntBASIC-1.83□□□□□ -2.7
CRXO43186 RNU6-832P-201ENST00000363319 107 ntBASIC-1.84□□□□□ -2.7
CRXO43186 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.84□□□□□ -2.7
CRXO43186 Y_RNA.284-201ENST00000364806 102 ntBASIC-1.84□□□□□ -2.7
CRXO43186 RNU4-71P-201ENST00000516258 113 ntBASIC-1.84□□□□□ -2.7
CRXO43186 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-1.84□□□□□ -2.7
CRXO43186 AC141273.2-201ENST00000618989 130 ntBASIC-1.84□□□□□ -2.7
CRXO43186 RNA5SP405-201ENST00000363059 114 ntBASIC-1.85□□□□□ -2.71
CRXO43186 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.85□□□□□ -2.71
CRXO43186 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.85□□□□□ -2.71
CRXO43186 SNORA18.5-201ENST00000516616 101 ntBASIC-1.85□□□□□ -2.71
CRXO43186 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.86□□□□□ -2.71
CRXO43186 RNY3P2-201ENST00000362918 102 ntBASIC-1.86□□□□□ -2.71
CRXO43186 RNU6-824P-201ENST00000363724 104 ntBASIC-1.86□□□□□ -2.71
CRXO43186 SNORD45B-201ENST00000364617 72 ntBASIC-1.86□□□□□ -2.71
CRXO43186 SNORA19.1-201ENST00000410656 129 ntBASIC-1.86□□□□□ -2.71
CRXO43186 MIR3613-201ENST00000579844 87 ntBASIC-1.86□□□□□ -2.71
CRXO43186 RNU6-79P-201ENST00000362511 107 ntBASIC-1.87□□□□□ -2.71
CRXO43186 RNU6-813P-201ENST00000384691 107 ntBASIC-1.87□□□□□ -2.71
CRXO43186 MIR496-201ENST00000385226 102 ntBASIC-1.87□□□□□ -2.71
CRXO43186 MIR1207-201ENST00000408249 87 ntBASIC-1.87□□□□□ -2.71
CRXO43186 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-1.87□□□□□ -2.71
CRXO43186 AC103810.7-201ENST00000607821 91 ntBASIC-1.87□□□□□ -2.71
CRXO43186 AC018880.2-201ENST00000414265 201 ntBASIC-1.88□□□□□ -2.71
CRXO43186 MTND3P2-201ENST00000438452 342 ntBASIC-1.88□□□□□ -2.71
CRXO43186 AC090616.4-201ENST00000448026 115 ntBASIC-1.88□□□□□ -2.71
CRXO43186 RNU6-1153P-201ENST00000516760 105 ntBASIC-1.88□□□□□ -2.71
CRXO43186 MIR6739-201ENST00000622461 75 ntBASIC-1.88□□□□□ -2.71
CRXO43186 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.89□□□□□ -2.71
CRXO43186 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.89□□□□□ -2.71
CRXO43186 RNU7-88P-201ENST00000458752 63 ntBASIC-1.89□□□□□ -2.71
CRXO43186 MIR3139-201ENST00000579145 76 ntBASIC-1.89□□□□□ -2.71
CRXO43186 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.9□□□□□ -2.71
CRXO43186 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.9□□□□□ -2.71
CRXO43186 SNORD19-201ENST00000391191 68 ntBASIC-1.9□□□□□ -2.71
CRXO43186 AL158147.1-201ENST00000443970 75 ntBASIC-1.9□□□□□ -2.71
CRXO43186 RNU6-111P-201ENST00000517179 105 ntBASIC-1.9□□□□□ -2.71
CRXO43186 U7.5-201ENST00000517224 61 ntBASIC-1.9□□□□□ -2.71
CRXO43186 AC025166.1-201ENST00000612411 163 ntBASIC-1.9□□□□□ -2.71
CRXO43186 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.91□□□□□ -2.72
CRXO43186 RNU6-841P-201ENST00000383872 107 ntBASIC-1.91□□□□□ -2.72
CRXO43186 Y_RNA.564-201ENST00000384708 106 ntBASIC-1.91□□□□□ -2.72
CRXO43186 RPL35AP4-201ENST00000412007 102 ntBASIC-1.91□□□□□ -2.72
CRXO43186 AP002795.1-201ENST00000534879 84 ntBASIC-1.91□□□□□ -2.72
CRXO43186 MIR3128-201ENST00000581957 66 ntBASIC-1.91□□□□□ -2.72
CRXO43186 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.91□□□□□ -2.72
CRXO43186 MIR4723-201ENST00000585070 81 ntBASIC-1.91□□□□□ -2.72
CRXO43186 U6.81-201ENST00000612550 106 ntBASIC-1.91□□□□□ -2.72
CRXO43186 Y_RNA.475-201ENST00000384345 101 ntBASIC-1.92□□□□□ -2.72
CRXO43186 MIR548Q-201ENST00000408404 100 ntBASIC-1.92□□□□□ -2.72
CRXO43186 MIR548F4-201ENST00000408515 105 ntBASIC-1.92□□□□□ -2.72
CRXO43186 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.92□□□□□ -2.72
CRXO43186 RNU6-752P-201ENST00000516376 102 ntBASIC-1.92□□□□□ -2.72
CRXO43186 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.92□□□□□ -2.72
CRXO43186 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.92□□□□□ -2.72
CRXO43186 AP001340.1-201ENST00000624405 217 ntBASIC-1.92□□□□□ -2.72
CRXO43186 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.93□□□□□ -2.72
CRXO43186 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.93□□□□□ -2.72
CRXO43186 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.93□□□□□ -2.72
CRXO43186 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.93□□□□□ -2.72
CRXO43186 Y_RNA.211-201ENST00000364164 101 ntBASIC-1.93□□□□□ -2.72
CRXO43186 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.93□□□□□ -2.72
CRXO43186 RNU6-695P-201ENST00000391157 104 ntBASIC-1.93□□□□□ -2.72
CRXO43186 MIR513C-201ENST00000401352 84 ntBASIC-1.93□□□□□ -2.72
CRXO43186 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.93□□□□□ -2.72
CRXO43186 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.94□□□□□ -2.72
CRXO43186 RNU6-194P-201ENST00000363862 105 ntBASIC-1.94□□□□□ -2.72
CRXO43186 AL118496.2-201ENST00000448300 230 ntBASIC-1.94□□□□□ -2.72
CRXO43186 MIR548AM-201ENST00000584298 74 ntBASIC-1.94□□□□□ -2.72
CRXO43186 Y_RNA.535-201ENST00000384612 99 ntBASIC-1.95□□□□□ -2.72
CRXO43186 MT-TM-201ENST00000387377 68 ntBASIC-1.95□□□□□ -2.72
CRXO43186 SNORD54-201ENST00000459159 67 ntBASIC-1.95□□□□□ -2.72
CRXO43186 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.95□□□□□ -2.72
CRXO43186 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.95□□□□□ -2.72
CRXO43186 AC072026.1-201ENST00000605023 201 ntBASIC-1.95□□□□□ -2.72
CRXO43186 RNU6-246P-201ENST00000384702 107 ntBASIC-1.96□□□□□ -2.72
CRXO43186 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.96□□□□□ -2.72
CRXO43186 Y_RNA.603-201ENST00000410571 108 ntBASIC-1.96□□□□□ -2.72
CRXO43186 MTCYBP6-201ENST00000441810 138 ntBASIC-1.96□□□□□ -2.72
CRXO43186 MIR4679-2-201ENST00000578358 77 ntBASIC-1.96□□□□□ -2.72
CRXO43186 RNU6-774P-201ENST00000363238 107 ntBASIC-1.97□□□□□ -2.72
CRXO43186 RNU6-807P-201ENST00000516805 107 ntBASIC-1.97□□□□□ -2.72
CRXO43186 U7.2-201ENST00000607576 63 ntBASIC-1.97□□□□□ -2.72
CRXO43186 AL035470.1-201ENST00000622571 220 ntBASIC-1.97□□□□□ -2.72
CRXO43186 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.98□□□□□ -2.73
CRXO43186 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.98□□□□□ -2.73
CRXO43186 MIR548AG1-201ENST00000579932 66 ntBASIC-1.98□□□□□ -2.73
CRXO43186 MIR3123-201ENST00000583417 75 ntBASIC-1.98□□□□□ -2.73
CRXO43186 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.98□□□□□ -2.73
CRXO43186 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.99□□□□□ -2.73
CRXO43186 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.99□□□□□ -2.73
CRXO43186 SNORD58C-201ENST00000365223 64 ntBASIC-1.99□□□□□ -2.73
CRXO43186 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.99□□□□□ -2.73
CRXO43186 Y_RNA.591-201ENST00000410228 104 ntBASIC-1.99□□□□□ -2.73
CRXO43186 SNORA81.3-201ENST00000517283 198 ntBASIC-1.99□□□□□ -2.73
CRXO43186 Y_RNA.240-201ENST00000364469 95 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 199.7 ms