Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 SNORD58A-201ENST00000383875 65 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 MIRLET7B-201ENST00000385140 83 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 RNU6-346P-201ENST00000516288 111 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 MIR4499-201ENST00000584834 69 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 U6.95-201ENST00000636931 70 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 MIR3914-2-201ENST00000637339 95 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 RNU6-907P-201ENST00000390924 102 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 RNU6-972P-201ENST00000391208 107 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 RNU6-412P-201ENST00000516434 106 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.24□□□□□ -2.61
CUX2O14529 RNU6-208P-201ENST00000362431 107 ntBASIC-1.25□□□□□ -2.61
CUX2O14529 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.25□□□□□ -2.61
CUX2O14529 RNU6-990P-201ENST00000364385 104 ntBASIC-1.25□□□□□ -2.61
CUX2O14529 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
CUX2O14529 RNA5SP292-201ENST00000390974 118 ntBASIC-1.25□□□□□ -2.61
CUX2O14529 RNU6-274P-201ENST00000459566 107 ntBASIC-1.25□□□□□ -2.61
CUX2O14529 MIR3115-201ENST00000577915 68 ntBASIC-1.25□□□□□ -2.61
CUX2O14529 AC012531.4-201ENST00000616509 177 ntBASIC-1.25□□□□□ -2.61
CUX2O14529 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.26□□□□□ -2.61
CUX2O14529 SNORA24B-201ENST00000384176 131 ntBASIC-1.26□□□□□ -2.61
CUX2O14529 AC021146.9-201ENST00000512503 156 ntBASIC-1.26□□□□□ -2.61
CUX2O14529 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.26□□□□□ -2.61
CUX2O14529 uc_338.19-201ENST00000616808 99 ntBASIC-1.26□□□□□ -2.61
CUX2O14529 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.27□□□□□ -2.61
CUX2O14529 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.27□□□□□ -2.61
CUX2O14529 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.27□□□□□ -2.61
CUX2O14529 MIR124-2-201ENST00000385081 109 ntBASIC-1.27□□□□□ -2.61
CUX2O14529 SCARNA23-201ENST00000516060 130 ntBASIC-1.27□□□□□ -2.61
CUX2O14529 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.27□□□□□ -2.61
CUX2O14529 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.28□□□□□ -2.61
CUX2O14529 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.28□□□□□ -2.61
CUX2O14529 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.28□□□□□ -2.61
CUX2O14529 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.28□□□□□ -2.61
CUX2O14529 RNU6-905P-201ENST00000384434 107 ntBASIC-1.29□□□□□ -2.62
CUX2O14529 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.29□□□□□ -2.62
CUX2O14529 Y_RNA.71-201ENST00000362892 104 ntBASIC-1.3□□□□□ -2.62
CUX2O14529 RNU6-592P-201ENST00000411333 103 ntBASIC-1.3□□□□□ -2.62
CUX2O14529 MIR6509-201ENST00000614603 85 ntBASIC-1.3□□□□□ -2.62
CUX2O14529 MIR4773-1-201ENST00000637203 78 ntBASIC-1.3□□□□□ -2.62
CUX2O14529 SNORD115-23-201ENST00000364461 82 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 RNY4P7-201ENST00000364600 96 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 RNU6-382P-201ENST00000365181 106 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 AL691482.2-201ENST00000457453 84 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 RNU6-659P-201ENST00000516454 104 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 RNY1P5-201ENST00000383890 115 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 MIR548I1-201ENST00000408810 149 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 RNU6-887P-201ENST00000410660 100 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.31□□□□□ -2.62
CUX2O14529 RNA5SP180-201ENST00000516181 101 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 SNORD33.1-201ENST00000516213 88 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 MIR4306-201ENST00000583390 91 ntBASIC-1.31□□□□□ -2.62
CUX2O14529 RNU6-1107P-201ENST00000364817 104 ntBASIC-1.32□□□□□ -2.62
CUX2O14529 MIR203A-201ENST00000384836 110 ntBASIC-1.32□□□□□ -2.62
CUX2O14529 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.33□□□□□ -2.62
CUX2O14529 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.33□□□□□ -2.62
CUX2O14529 snoU13.17-201ENST00000458802 104 ntBASIC-1.33□□□□□ -2.62
CUX2O14529 RNA5SP147-201ENST00000516493 109 ntBASIC-1.33□□□□□ -2.62
CUX2O14529 AC090425.1-201ENST00000610007 140 ntBASIC-1.33□□□□□ -2.62
CUX2O14529 RNU5F-1-201ENST00000362507 117 ntBASIC-1.34□□□□□ -2.62
CUX2O14529 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.34□□□□□ -2.62
CUX2O14529 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.35□□□□□ -2.63
CUX2O14529 SNORD116-21-201ENST00000384507 92 ntBASIC-1.35□□□□□ -2.63
CUX2O14529 SNORD90-201ENST00000391145 111 ntBASIC-1.35□□□□□ -2.63
CUX2O14529 CYP3A54P-201ENST00000566950 75 ntBASIC-1.35□□□□□ -2.63
CUX2O14529 RNU6-255P-201ENST00000516957 105 ntBASIC-1.36□□□□□ -2.63
CUX2O14529 AC026421.1-201ENST00000519101 163 ntBASIC-1.36□□□□□ -2.63
CUX2O14529 AL353803.5-201ENST00000599815 141 ntBASIC-1.36□□□□□ -2.63
CUX2O14529 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.37□□□□□ -2.63
CUX2O14529 MIR1236-201ENST00000408340 102 ntBASIC-1.37□□□□□ -2.63
CUX2O14529 RNU6-794P-201ENST00000517261 64 ntBASIC-1.37□□□□□ -2.63
CUX2O14529 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.38□□□□□ -2.63
CUX2O14529 SNORD114-17-201ENST00000364699 75 ntBASIC-1.38□□□□□ -2.63
CUX2O14529 MIR1302-5-201ENST00000408164 150 ntBASIC-1.38□□□□□ -2.63
CUX2O14529 SCARNA18B-201ENST00000458806 135 ntBASIC-1.38□□□□□ -2.63
CUX2O14529 RNU6-824P-201ENST00000363724 104 ntBASIC-1.39□□□□□ -2.63
CUX2O14529 Y_RNA.218-201ENST00000364218 104 ntBASIC-1.39□□□□□ -2.63
CUX2O14529 SNORD64-201ENST00000386683 67 ntBASIC-1.39□□□□□ -2.63
CUX2O14529 MIR1255B2-201ENST00000408618 67 ntBASIC-1.39□□□□□ -2.63
CUX2O14529 AC090617.8-201ENST00000623339 167 ntBASIC-1.39□□□□□ -2.63
CUX2O14529 RNU6-924P-201ENST00000362926 108 ntBASIC-1.4□□□□□ -2.63
CUX2O14529 SNORD116-10-201ENST00000363791 102 ntBASIC-1.4□□□□□ -2.63
CUX2O14529 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.4□□□□□ -2.63
CUX2O14529 RNU6-880P-201ENST00000384526 107 ntBASIC-1.4□□□□□ -2.63
CUX2O14529 Y_RNA.609-201ENST00000410669 89 ntBASIC-1.4□□□□□ -2.63
CUX2O14529 RNU6-904P-201ENST00000516206 101 ntBASIC-1.4□□□□□ -2.63
CUX2O14529 MIR3657-201ENST00000584818 117 ntBASIC-1.4□□□□□ -2.63
CUX2O14529 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.41□□□□□ -2.63
CUX2O14529 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.41□□□□□ -2.63
CUX2O14529 SNORA19.1-201ENST00000410656 129 ntBASIC-1.42□□□□□ -2.64
CUX2O14529 RNU6-706P-201ENST00000517229 104 ntBASIC-1.42□□□□□ -2.64
CUX2O14529 SNORA2.1-201ENST00000363089 137 ntBASIC-1.43□□□□□ -2.64
CUX2O14529 MIR4796-201ENST00000580742 81 ntBASIC-1.43□□□□□ -2.64
CUX2O14529 SNORA33.1-201ENST00000364957 130 ntBASIC-1.43□□□□□ -2.64
CUX2O14529 RNU6-431P-201ENST00000383874 107 ntBASIC-1.43□□□□□ -2.64
CUX2O14529 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.43□□□□□ -2.64
CUX2O14529 AC140658.3-201ENST00000567603 271 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms