Protein–RNA interactions for Protein: A6NJ46

NKX6-3, Homeobox protein Nkx-6.3, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-3A6NJ46 RNU6-824P-201ENST00000363724 104 ntBASIC-0.55□□□□□ -2.5
NKX6-3A6NJ46 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.55□□□□□ -2.5
NKX6-3A6NJ46 AC021146.9-201ENST00000512503 156 ntBASIC-0.55□□□□□ -2.5
NKX6-3A6NJ46 RNA5SP147-201ENST00000516493 109 ntBASIC-0.55□□□□□ -2.5
NKX6-3A6NJ46 RNU6-502P-201ENST00000362419 108 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 SNORA63.4-201ENST00000362763 126 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 SNORD115-27-201ENST00000364430 82 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 SNORA40.17-201ENST00000517256 115 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 MIR4432-201ENST00000581823 84 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 AL391099.1-201ENST00000624635 187 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 AC093726.3-201ENST00000637588 150 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 MIR6086-201ENST00000638065 55 ntBASIC-0.56□□□□□ -2.5
NKX6-3A6NJ46 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.57□□□□□ -2.5
NKX6-3A6NJ46 SNORD113-1-201ENST00000365321 69 ntBASIC-0.57□□□□□ -2.5
NKX6-3A6NJ46 RNU7-24P-201ENST00000458867 62 ntBASIC-0.57□□□□□ -2.5
NKX6-3A6NJ46 RNU7-55P-201ENST00000459426 62 ntBASIC-0.57□□□□□ -2.5
NKX6-3A6NJ46 SNORD95.1-201ENST00000364099 68 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 RNA5SP368-201ENST00000364298 116 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 RPS29P8-201ENST00000445109 171 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 SNORD38.3-201ENST00000516599 73 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 RNA5SP169-201ENST00000517268 117 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 MIR5704-201ENST00000584029 77 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 AC108676.2-201ENST00000605225 163 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 MIR6773-201ENST00000612812 74 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 MIR6509-201ENST00000614603 85 ntBASIC-0.58□□□□□ -2.5
NKX6-3A6NJ46 MIR204-201ENST00000385200 110 ntBASIC-0.59□□□□□ -2.5
NKX6-3A6NJ46 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.59□□□□□ -2.5
NKX6-3A6NJ46 snoR1.1-201ENST00000628177 80 ntBASIC-0.59□□□□□ -2.5
NKX6-3A6NJ46 SNORD114-14-201ENST00000362723 75 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 RNU4-61P-201ENST00000411243 107 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 AL691482.2-201ENST00000457453 84 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 RNU6-789P-201ENST00000517105 102 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 MIR4280-201ENST00000582178 76 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 MIR2052-201ENST00000636055 55 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 U6.96-201ENST00000636425 70 ntBASIC-0.6□□□□□ -2.51
NKX6-3A6NJ46 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 RNU6-260P-201ENST00000384092 107 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 SNORD20-201ENST00000384550 80 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 MIR519C-201ENST00000385053 87 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 SNORD75.1-201ENST00000408373 60 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 AL450471.1-201ENST00000447509 127 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 RNU6-274P-201ENST00000459566 107 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 SNORA40.13-201ENST00000516379 120 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 RNU6-158P-201ENST00000517104 100 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 AP001318.4-201ENST00000616637 121 ntBASIC-0.61□□□□□ -2.51
NKX6-3A6NJ46 RNU6-973P-201ENST00000364690 107 ntBASIC-0.62□□□□□ -2.51
NKX6-3A6NJ46 RNU6-337P-201ENST00000391243 106 ntBASIC-0.62□□□□□ -2.51
NKX6-3A6NJ46 MIR4668-201ENST00000582284 70 ntBASIC-0.63□□□□□ -2.51
NKX6-3A6NJ46 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.64□□□□□ -2.51
NKX6-3A6NJ46 MALAT1.1-201ENST00000618249 95 ntBASIC-0.64□□□□□ -2.51
NKX6-3A6NJ46 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.64□□□□□ -2.51
NKX6-3A6NJ46 SNORD115-37-201ENST00000363768 82 ntBASIC-0.65□□□□□ -2.51
NKX6-3A6NJ46 MIR224-201ENST00000384889 81 ntBASIC-0.65□□□□□ -2.51
NKX6-3A6NJ46 MIRLET7B-201ENST00000385140 83 ntBASIC-0.65□□□□□ -2.51
NKX6-3A6NJ46 MIR3657-201ENST00000584818 117 ntBASIC-0.65□□□□□ -2.51
NKX6-3A6NJ46 U6.81-201ENST00000612550 106 ntBASIC-0.65□□□□□ -2.51
NKX6-3A6NJ46 MIR6851-201ENST00000617060 67 ntBASIC-0.65□□□□□ -2.51
NKX6-3A6NJ46 RNU6-208P-201ENST00000362431 107 ntBASIC-0.66□□□□□ -2.52
NKX6-3A6NJ46 SNORD114-15-201ENST00000364687 72 ntBASIC-0.66□□□□□ -2.52
NKX6-3A6NJ46 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
NKX6-3A6NJ46 MIR8068-201ENST00000618032 68 ntBASIC-0.66□□□□□ -2.52
NKX6-3A6NJ46 AC090617.8-201ENST00000623339 167 ntBASIC-0.66□□□□□ -2.52
NKX6-3A6NJ46 HAR1A.1-201ENST00000459583 118 ntBASIC-0.67□□□□□ -2.52
NKX6-3A6NJ46 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.67□□□□□ -2.52
NKX6-3A6NJ46 RNU6-919P-201ENST00000516731 104 ntBASIC-0.67□□□□□ -2.52
NKX6-3A6NJ46 MIR4436A-201ENST00000585278 85 ntBASIC-0.67□□□□□ -2.52
NKX6-3A6NJ46 RNU6-633P-201ENST00000362612 103 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-755P-201ENST00000364400 103 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-215P-201ENST00000365169 102 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-32P-201ENST00000383948 107 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-147P-201ENST00000383983 107 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-13P-201ENST00000384248 107 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-12P-201ENST00000384604 107 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-41P-201ENST00000384741 107 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 RNU6-402P-201ENST00000410678 103 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 MIR6854-201ENST00000614935 69 ntBASIC-0.68□□□□□ -2.52
NKX6-3A6NJ46 SNORA33.1-201ENST00000364957 130 ntBASIC-0.69□□□□□ -2.52
NKX6-3A6NJ46 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.69□□□□□ -2.52
NKX6-3A6NJ46 SNORD116-22-201ENST00000384430 92 ntBASIC-0.69□□□□□ -2.52
NKX6-3A6NJ46 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.69□□□□□ -2.52
NKX6-3A6NJ46 RNU6-406P-201ENST00000516470 107 ntBASIC-0.69□□□□□ -2.52
NKX6-3A6NJ46 RNU6-267P-201ENST00000516714 103 ntBASIC-0.69□□□□□ -2.52
NKX6-3A6NJ46 SNORA2.1-201ENST00000363089 137 ntBASIC-0.7□□□□□ -2.52
NKX6-3A6NJ46 MIR488-201ENST00000365739 83 ntBASIC-0.7□□□□□ -2.52
NKX6-3A6NJ46 SNORD77.2-201ENST00000391045 68 ntBASIC-0.7□□□□□ -2.52
NKX6-3A6NJ46 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.7□□□□□ -2.52
NKX6-3A6NJ46 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.7□□□□□ -2.52
NKX6-3A6NJ46 AL035461.1-201ENST00000421490 332 ntBASIC-0.7□□□□□ -2.52
NKX6-3A6NJ46 RNU6-340P-201ENST00000364005 107 ntBASIC-0.71□□□□□ -2.52
NKX6-3A6NJ46 RNU6-44P-201ENST00000384045 107 ntBASIC-0.71□□□□□ -2.52
NKX6-3A6NJ46 RNY1P7-201ENST00000384743 110 ntBASIC-0.71□□□□□ -2.52
NKX6-3A6NJ46 RNU6-592P-201ENST00000411333 103 ntBASIC-0.71□□□□□ -2.52
NKX6-3A6NJ46 MIR548AI-201ENST00000579940 88 ntBASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 189.3 ms