Protein–RNA interactions for Protein: A0PK11

CLRN2, Clarin-2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN2A0PK11 RNU6-519P-201ENST00000410590 108 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 RNA5SP180-201ENST00000516181 101 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 SNORA18.5-201ENST00000516616 101 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 AC006254.2-201ENST00000603259 279 ntBASIC-1.12□□□□□ -2.59
CLRN2A0PK11 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.13□□□□□ -2.59
CLRN2A0PK11 RNU6-382P-201ENST00000365181 106 ntBASIC-1.13□□□□□ -2.59
CLRN2A0PK11 MTATP6P29-201ENST00000415057 132 ntBASIC-1.13□□□□□ -2.59
CLRN2A0PK11 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.13□□□□□ -2.59
CLRN2A0PK11 AL353803.5-201ENST00000599815 141 ntBASIC-1.13□□□□□ -2.59
CLRN2A0PK11 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 RNU6-886P-201ENST00000384319 105 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.14□□□□□ -2.59
CLRN2A0PK11 snoU13.17-201ENST00000458802 104 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 SCARNA18B-201ENST00000458806 135 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 RNU6-182P-201ENST00000516970 105 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 AL445584.3-201ENST00000617173 78 ntBASIC-1.14□□□□□ -2.59
CLRN2A0PK11 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.15□□□□□ -2.59
CLRN2A0PK11 SNORA40-201ENST00000388090 126 ntBASIC-1.15□□□□□ -2.59
CLRN2A0PK11 MIR4499-201ENST00000584834 69 ntBASIC-1.15□□□□□ -2.59
CLRN2A0PK11 MIR6888-201ENST00000621977 67 ntBASIC-1.15□□□□□ -2.59
CLRN2A0PK11 SNORD114-17-201ENST00000364699 75 ntBASIC-1.16□□□□□ -2.6
CLRN2A0PK11 RNU7-107P-201ENST00000459121 61 ntBASIC-1.16□□□□□ -2.6
CLRN2A0PK11 Y_RNA.712-201ENST00000517011 92 ntBASIC-1.16□□□□□ -2.6
CLRN2A0PK11 uc_338.19-201ENST00000616808 99 ntBASIC-1.16□□□□□ -2.6
CLRN2A0PK11 MIR3914-2-201ENST00000637339 95 ntBASIC-1.16□□□□□ -2.6
CLRN2A0PK11 RNU6-824P-201ENST00000363724 104 ntBASIC-1.17□□□□□ -2.6
CLRN2A0PK11 RNU6-257P-201ENST00000410238 98 ntBASIC-1.17□□□□□ -2.6
CLRN2A0PK11 AC140658.3-201ENST00000567603 271 ntBASIC-1.17□□□□□ -2.6
CLRN2A0PK11 AC012531.4-201ENST00000616509 177 ntBASIC-1.17□□□□□ -2.6
CLRN2A0PK11 SNORA2.1-201ENST00000363089 137 ntBASIC-1.18□□□□□ -2.6
CLRN2A0PK11 RNY4P27-201ENST00000363341 96 ntBASIC-1.18□□□□□ -2.6
CLRN2A0PK11 SNORD58A-201ENST00000383875 65 ntBASIC-1.18□□□□□ -2.6
CLRN2A0PK11 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.18□□□□□ -2.6
CLRN2A0PK11 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.18□□□□□ -2.6
CLRN2A0PK11 MIR548I1-201ENST00000408810 149 ntBASIC-1.18□□□□□ -2.6
CLRN2A0PK11 RNU7-200P-201ENST00000516105 62 ntBASIC-1.18□□□□□ -2.6
CLRN2A0PK11 SNORA33.1-201ENST00000364957 130 ntBASIC-1.19□□□□□ -2.6
CLRN2A0PK11 RNU6-795P-201ENST00000516323 103 ntBASIC-1.19□□□□□ -2.6
CLRN2A0PK11 MIR3657-201ENST00000584818 117 ntBASIC-1.19□□□□□ -2.6
CLRN2A0PK11 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.2□□□□□ -2.6
CLRN2A0PK11 Y_RNA.281-201ENST00000364774 94 ntBASIC-1.2□□□□□ -2.6
CLRN2A0PK11 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.2□□□□□ -2.6
CLRN2A0PK11 RNU6-972P-201ENST00000391208 107 ntBASIC-1.2□□□□□ -2.6
CLRN2A0PK11 CYP3A54P-201ENST00000566950 75 ntBASIC-1.2□□□□□ -2.6
CLRN2A0PK11 MIR6509-201ENST00000614603 85 ntBASIC-1.2□□□□□ -2.6
CLRN2A0PK11 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.21□□□□□ -2.6
CLRN2A0PK11 MIR1255B2-201ENST00000408618 67 ntBASIC-1.21□□□□□ -2.6
CLRN2A0PK11 RNU6-1211P-201ENST00000459179 105 ntBASIC-1.21□□□□□ -2.6
CLRN2A0PK11 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.21□□□□□ -2.6
CLRN2A0PK11 MIR4773-1-201ENST00000637203 78 ntBASIC-1.21□□□□□ -2.6
CLRN2A0PK11 RNU5F-1-201ENST00000362507 117 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 RNU6-274P-201ENST00000459566 107 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 Y_RNA.705-201ENST00000516862 110 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 snoU83B.1-201ENST00000517136 88 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 U6.81-201ENST00000612550 106 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 U6.95-201ENST00000636931 70 ntBASIC-1.22□□□□□ -2.6
CLRN2A0PK11 RNU6-924P-201ENST00000362926 108 ntBASIC-1.23□□□□□ -2.61
CLRN2A0PK11 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.23□□□□□ -2.61
CLRN2A0PK11 RNU6-80P-201ENST00000384195 107 ntBASIC-1.23□□□□□ -2.61
CLRN2A0PK11 SNORD33.1-201ENST00000516213 88 ntBASIC-1.23□□□□□ -2.61
CLRN2A0PK11 RNA5SP147-201ENST00000516493 109 ntBASIC-1.23□□□□□ -2.61
CLRN2A0PK11 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 MIR521-2-201ENST00000384818 87 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 MIR203A-201ENST00000384836 110 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 MIR548A3-201ENST00000385297 97 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 RNU6-887P-201ENST00000410660 100 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 SCARNA23-201ENST00000516060 130 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 RNU6-904P-201ENST00000516206 101 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 RNU6-659P-201ENST00000516454 104 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.24□□□□□ -2.61
CLRN2A0PK11 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.25□□□□□ -2.61
CLRN2A0PK11 Y_RNA.586-201ENST00000391146 98 ntBASIC-1.25□□□□□ -2.61
CLRN2A0PK11 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.25□□□□□ -2.61
CLRN2A0PK11 AL691482.2-201ENST00000457453 84 ntBASIC-1.25□□□□□ -2.61
CLRN2A0PK11 RNU6-971P-201ENST00000516920 106 ntBASIC-1.25□□□□□ -2.61
CLRN2A0PK11 AC026421.1-201ENST00000519101 163 ntBASIC-1.25□□□□□ -2.61
CLRN2A0PK11 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 SNORD115-33-201ENST00000363723 82 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 RNY1P5-201ENST00000383890 115 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 Y_RNA.558-201ENST00000384685 113 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 RNU7-154P-201ENST00000516194 62 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 MIR4719-201ENST00000585233 84 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 MIR6739-201ENST00000622461 75 ntBASIC-1.26□□□□□ -2.61
CLRN2A0PK11 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.27□□□□□ -2.61
CLRN2A0PK11 Y_RNA.506-201ENST00000384494 102 ntBASIC-1.27□□□□□ -2.61
CLRN2A0PK11 SNORA26.4-201ENST00000391188 123 ntBASIC-1.27□□□□□ -2.61
CLRN2A0PK11 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-1.27□□□□□ -2.61
CLRN2A0PK11 SNORD116-10-201ENST00000363791 102 ntBASIC-1.28□□□□□ -2.61
CLRN2A0PK11 MIR29B1-201ENST00000385015 81 ntBASIC-1.28□□□□□ -2.61
CLRN2A0PK11 MIR4796-201ENST00000580742 81 ntBASIC-1.28□□□□□ -2.61
CLRN2A0PK11 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.28□□□□□ -2.61
CLRN2A0PK11 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.29□□□□□ -2.62
CLRN2A0PK11 SNORA19.1-201ENST00000410656 129 ntBASIC-1.29□□□□□ -2.62
CLRN2A0PK11 SNORD63.1-201ENST00000516178 80 ntBASIC-1.29□□□□□ -2.62
CLRN2A0PK11 RNU6-412P-201ENST00000516434 106 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 228 ms