Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-905P-201ENST00000384434 107 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 SNORA3B-201ENST00000391305 131 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-592P-201ENST00000411333 103 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 MTATP8P2-201ENST00000435212 202 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-766P-201ENST00000362478 107 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 SNORD115-23-201ENST00000364461 82 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNY4P3-201ENST00000365254 95 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-260P-201ENST00000384092 107 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNY4P18-201ENST00000391107 89 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-721P-201ENST00000410155 105 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNA5SP25-201ENST00000410815 110 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 MIR6509-201ENST00000614603 85 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 SNORA33.1-201ENST00000364957 130 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 MIR204-201ENST00000385200 110 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 MIR3657-201ENST00000584818 117 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 AC108676.2-201ENST00000605225 163 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 SNORD2-201ENST00000459163 69 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 SNORD22.1-201ENST00000516331 125 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-479P-201ENST00000516348 105 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 U6.81-201ENST00000612550 106 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 MIR6854-201ENST00000614935 69 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 U6.96-201ENST00000636425 70 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 AC132825.6-201ENST00000638861 357 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 RNU5F-1-201ENST00000362507 117 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 SNORA32.3-201ENST00000384772 121 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 MIR1236-201ENST00000408340 102 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-313P-201ENST00000516317 112 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 AC006254.2-201ENST00000603259 279 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 SNORA63.4-201ENST00000362763 126 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 RNA5SP451-201ENST00000410588 110 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 AL691482.2-201ENST00000457453 84 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 HAR1A.1-201ENST00000459583 118 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-267P-201ENST00000516714 103 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-834P-201ENST00000362367 110 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RNU2-51P-201ENST00000410708 197 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 AL606753.1-201ENST00000427435 87 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RPS29P8-201ENST00000445109 171 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 MIR4464-201ENST00000580818 92 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 snoR1.1-201ENST00000628177 80 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 SNORD95.1-201ENST00000364099 68 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR488-201ENST00000365739 83 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR518B-201ENST00000385127 83 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 AL031737.1-201ENST00000450125 223 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-1-201ENST00000578940 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-2-201ENST00000579107 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-3-201ENST00000579566 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 AP001318.4-201ENST00000616637 121 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-4-201ENST00000617599 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 SNORD113-1-201ENST00000365321 69 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR124-2-201ENST00000385081 109 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR517B-201ENST00000385102 67 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR1255B2-201ENST00000408618 67 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR4668-201ENST00000582284 70 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 YWHAEP3-201ENST00000582767 121 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-208P-201ENST00000362431 107 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 SNORA2.1-201ENST00000363089 137 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 MIR519C-201ENST00000385053 87 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 SNORD75.1-201ENST00000408373 60 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 AL450471.1-201ENST00000447509 127 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 AP000533.3-201ENST00000447704 118 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-274P-201ENST00000459566 107 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 CYP3A54P-201ENST00000566950 75 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 AL353803.5-201ENST00000599815 141 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 MIR6888-201ENST00000621977 67 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-633P-201ENST00000362612 103 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-340P-201ENST00000364005 107 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-219P-201ENST00000364728 107 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNY1P7-201ENST00000384743 110 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-402P-201ENST00000410678 103 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-158P-201ENST00000517104 100 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 MALAT1.1-201ENST00000618249 95 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-640P-201ENST00000363693 105 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 SNORD20-201ENST00000384550 80 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 AC022137.1-201ENST00000483735 151 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 233.4 ms