Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 RNU6-1056P-201ENST00000383996 107 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-905P-201ENST00000384434 107 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-1117P-201ENST00000384525 104 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 SNORA3B-201ENST00000391305 131 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-592P-201ENST00000411333 103 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 MTATP8P2-201ENST00000435212 202 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.709-201ENST00000516952 92 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 MIR548AZ-201ENST00000616567 95 ntBASIC-0.51□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-766P-201ENST00000362478 107 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 SNORD115-23-201ENST00000364461 82 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNY4P3-201ENST00000365254 95 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-260P-201ENST00000384092 107 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNY4P18-201ENST00000391107 89 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNU6-721P-201ENST00000410155 105 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 RNA5SP25-201ENST00000410815 110 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 MIR6509-201ENST00000614603 85 ntBASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.52□□□□□ -2.49
TRAV40A0A0B4J280 SNORA33.1-201ENST00000364957 130 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 MIR204-201ENST00000385200 110 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 MIR3657-201ENST00000584818 117 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 AC108676.2-201ENST00000605225 163 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.818-201ENST00000618813 71 ntBASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-0.53□□□□□ -2.49
TRAV40A0A0B4J280 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 SNORD2-201ENST00000459163 69 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 SNORD22.1-201ENST00000516331 125 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-479P-201ENST00000516348 105 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 U6.81-201ENST00000612550 106 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 MIR6854-201ENST00000614935 69 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 U6.96-201ENST00000636425 70 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 AC132825.6-201ENST00000638861 357 ntBASIC-0.54□□□□□ -2.5
TRAV40A0A0B4J280 RNU5F-1-201ENST00000362507 117 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 SNORA32.3-201ENST00000384772 121 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 MIR1236-201ENST00000408340 102 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-313P-201ENST00000516317 112 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 AC006254.2-201ENST00000603259 279 ntBASIC-0.55□□□□□ -2.5
TRAV40A0A0B4J280 SNORA63.4-201ENST00000362763 126 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 RNA5SP451-201ENST00000410588 110 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 AL691482.2-201ENST00000457453 84 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 HAR1A.1-201ENST00000459583 118 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-267P-201ENST00000516714 103 ntBASIC-0.56□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-834P-201ENST00000362367 110 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RNU2-51P-201ENST00000410708 197 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 AL606753.1-201ENST00000427435 87 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 RPS29P8-201ENST00000445109 171 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 MIR4464-201ENST00000580818 92 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 snoR1.1-201ENST00000628177 80 ntBASIC-0.57□□□□□ -2.5
TRAV40A0A0B4J280 SNORD114-14-201ENST00000362723 75 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 SNORD95.1-201ENST00000364099 68 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR488-201ENST00000365739 83 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR518B-201ENST00000385127 83 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 AL031737.1-201ENST00000450125 223 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-1-201ENST00000578940 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-2-201ENST00000579107 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-3-201ENST00000579566 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 AP001318.4-201ENST00000616637 121 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 MIR3179-4-201ENST00000617599 84 ntBASIC-0.58□□□□□ -2.5
TRAV40A0A0B4J280 SNORD113-1-201ENST00000365321 69 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR124-2-201ENST00000385081 109 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR517B-201ENST00000385102 67 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR1255B2-201ENST00000408618 67 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 RNU6-1108P-201ENST00000516308 104 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 MIR4668-201ENST00000582284 70 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 YWHAEP3-201ENST00000582767 121 ntBASIC-0.59□□□□□ -2.5
TRAV40A0A0B4J280 Y_RNA.12-201ENST00000362393 112 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-208P-201ENST00000362431 107 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 SNORA2.1-201ENST00000363089 137 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 MIR519C-201ENST00000385053 87 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 SNORD75.1-201ENST00000408373 60 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 AL450471.1-201ENST00000447509 127 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 AP000533.3-201ENST00000447704 118 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-274P-201ENST00000459566 107 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 CYP3A54P-201ENST00000566950 75 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 AL353803.5-201ENST00000599815 141 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 MIR6888-201ENST00000621977 67 ntBASIC-0.6□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-633P-201ENST00000362612 103 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-340P-201ENST00000364005 107 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-219P-201ENST00000364728 107 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.348-201ENST00000365403 103 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNY1P7-201ENST00000384743 110 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-402P-201ENST00000410678 103 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-158P-201ENST00000517104 100 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 MALAT1.1-201ENST00000618249 95 ntBASIC-0.61□□□□□ -2.51
TRAV40A0A0B4J280 RNU6-640P-201ENST00000363693 105 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 SNORD20-201ENST00000384550 80 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.620-201ENST00000411009 88 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 AC022137.1-201ENST00000483735 151 ntBASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
TRAV40A0A0B4J280 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.63□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms