Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.71□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-1318P-201ENST00000365389 103 ntBASIC-1.71□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-813P-201ENST00000384691 107 ntBASIC-1.71□□□□□ -2.68
TRAV1-1A0A0B4J248 AL035470.1-201ENST00000622571 220 ntBASIC-1.71□□□□□ -2.68
TRAV1-1A0A0B4J248 RNY3P2-201ENST00000362918 102 ntBASIC-1.72□□□□□ -2.68
TRAV1-1A0A0B4J248 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.72□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-608P-201ENST00000383927 104 ntBASIC-1.72□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-880P-201ENST00000384526 107 ntBASIC-1.72□□□□□ -2.68
TRAV1-1A0A0B4J248 SNORD58.1-201ENST00000391313 66 ntBASIC-1.72□□□□□ -2.68
TRAV1-1A0A0B4J248 RNU6-228P-201ENST00000362700 106 ntBASIC-1.73□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.103-201ENST00000363171 102 ntBASIC-1.73□□□□□ -2.69
TRAV1-1A0A0B4J248 SNORD115-27-201ENST00000364430 82 ntBASIC-1.73□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-983P-201ENST00000516004 103 ntBASIC-1.73□□□□□ -2.69
TRAV1-1A0A0B4J248 MIR3171-201ENST00000584270 74 ntBASIC-1.73□□□□□ -2.69
TRAV1-1A0A0B4J248 U2.7-201ENST00000619197 100 ntBASIC-1.73□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.74□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.74□□□□□ -2.69
TRAV1-1A0A0B4J248 MIR520D-201ENST00000385002 87 ntBASIC-1.74□□□□□ -2.69
TRAV1-1A0A0B4J248 AL158147.1-201ENST00000443970 75 ntBASIC-1.74□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-656P-201ENST00000516785 107 ntBASIC-1.74□□□□□ -2.69
TRAV1-1A0A0B4J248 MIR4439-201ENST00000583746 80 ntBASIC-1.74□□□□□ -2.69
TRAV1-1A0A0B4J248 AC134503.1-201ENST00000633048 54 ntBASIC-1.74□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.75□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.75□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.75□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.228-201ENST00000364346 98 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 SNORD45B-201ENST00000364617 72 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-630P-201ENST00000391258 106 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 AC020661.2-201ENST00000560114 134 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 MIR4777-201ENST00000583710 86 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 AC025166.1-201ENST00000612411 163 ntBASIC-1.76□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 SNORA33.2-201ENST00000365413 134 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-458P-201ENST00000384179 107 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-795P-201ENST00000516323 103 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 U6.58-201ENST00000613107 107 ntBASIC-1.77□□□□□ -2.69
TRAV1-1A0A0B4J248 RNU6-119P-201ENST00000364882 107 ntBASIC-1.78□□□□□ -2.69
TRAV1-1A0A0B4J248 SNORD58C-201ENST00000365223 64 ntBASIC-1.78□□□□□ -2.69
TRAV1-1A0A0B4J248 MIR496-201ENST00000385226 102 ntBASIC-1.78□□□□□ -2.69
TRAV1-1A0A0B4J248 AC108019.1-201ENST00000512540 175 ntBASIC-1.78□□□□□ -2.69
TRAV1-1A0A0B4J248 SNORA81.3-201ENST00000517283 198 ntBASIC-1.78□□□□□ -2.69
TRAV1-1A0A0B4J248 Y_RNA.20-201ENST00000362479 113 ntBASIC-1.79□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.574-201ENST00000384766 95 ntBASIC-1.79□□□□□ -2.7
TRAV1-1A0A0B4J248 MT-TD-201ENST00000387419 68 ntBASIC-1.79□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.79□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.79□□□□□ -2.7
TRAV1-1A0A0B4J248 MIR4796-201ENST00000580742 81 ntBASIC-1.79□□□□□ -2.7
TRAV1-1A0A0B4J248 AC012531.4-201ENST00000616509 177 ntBASIC-1.79□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-563P-201ENST00000364872 108 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-639P-201ENST00000384074 107 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-695P-201ENST00000391157 104 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 MTND5P20-201ENST00000448677 143 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-807P-201ENST00000516805 107 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 MIR4756-201ENST00000577874 78 ntBASIC-1.8□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU4-40P-201ENST00000364351 143 ntBASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.502-201ENST00000384478 113 ntBASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-696P-201ENST00000390834 107 ntBASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.81□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.11-201ENST00000362375 109 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 MIR548C-201ENST00000384815 97 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 AL035461.1-201ENST00000421490 332 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU4-71P-201ENST00000516258 113 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-752P-201ENST00000516376 102 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.680-201ENST00000516441 93 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 AP001340.1-201ENST00000624405 217 ntBASIC-1.82□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.83□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-111P-201ENST00000517179 105 ntBASIC-1.83□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-340P-201ENST00000364005 107 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-598P-201ENST00000364017 105 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 RNU6-645P-201ENST00000364649 106 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 SNORD58A-201ENST00000383875 65 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 AL118496.2-201ENST00000448300 230 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 AC120024.2-201ENST00000576526 175 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 MIR3123-201ENST00000583417 75 ntBASIC-1.84□□□□□ -2.7
TRAV1-1A0A0B4J248 AL450471.1-201ENST00000447509 127 ntBASIC-1.85□□□□□ -2.71
TRAV1-1A0A0B4J248 RNU7-153P-201ENST00000516455 62 ntBASIC-1.85□□□□□ -2.71
TRAV1-1A0A0B4J248 MIR4679-2-201ENST00000578358 77 ntBASIC-1.85□□□□□ -2.71
TRAV1-1A0A0B4J248 MIR5009-201ENST00000578736 100 ntBASIC-1.85□□□□□ -2.71
TRAV1-1A0A0B4J248 MIR3128-201ENST00000581957 66 ntBASIC-1.85□□□□□ -2.71
TRAV1-1A0A0B4J248 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.85□□□□□ -2.71
TRAV1-1A0A0B4J248 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.86□□□□□ -2.71
TRAV1-1A0A0B4J248 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.86□□□□□ -2.71
TRAV1-1A0A0B4J248 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.86□□□□□ -2.71
TRAV1-1A0A0B4J248 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.86□□□□□ -2.71
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms