Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.68□□□□□ -2.3
CCDC187A0A096LP49 RNY1P8-201ENST00000383970 114 ntBASIC0.67□□□□□ -2.3
CCDC187A0A096LP49 RNA5SP227-201ENST00000516184 113 ntBASIC0.67□□□□□ -2.3
CCDC187A0A096LP49 RNA5SP347-201ENST00000362445 119 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 SNORD114-23-201ENST00000363536 72 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 Y_RNA.250-201ENST00000364542 110 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 MIR582-201ENST00000365731 98 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 MTND4LP1-201ENST00000446263 157 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 RNA5SP147-201ENST00000516493 109 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 MIR1273G-201ENST00000577677 100 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 SNORA70.25-201ENST00000612741 95 ntBASIC0.66□□□□□ -2.3
CCDC187A0A096LP49 RNU6-668P-201ENST00000364180 107 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 MIR521-2-201ENST00000384818 87 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 MIR652-201ENST00000385278 98 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 RNU6-542P-201ENST00000516405 103 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 AC092634.7-201ENST00000621022 103 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 AC010487.4-201ENST00000637027 61 ntBASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.65□□□□□ -2.31
CCDC187A0A096LP49 SNORD114-4-201ENST00000363962 75 ntBASIC0.64□□□□□ -2.31
CCDC187A0A096LP49 SCARNA17.3-201ENST00000516381 125 ntBASIC0.64□□□□□ -2.31
CCDC187A0A096LP49 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC0.64□□□□□ -2.31
CCDC187A0A096LP49 RNA5SP517-201ENST00000364724 117 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 RNU6-499P-201ENST00000365615 107 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 Y_RNA.407-201ENST00000383986 113 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 MIR548E-201ENST00000408287 88 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 HMGN2P22-201ENST00000427588 175 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 snoU13.13-201ENST00000458842 104 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 RNU6-1089P-201ENST00000516473 104 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 MIR4752-201ENST00000579672 72 ntBASIC0.63□□□□□ -2.31
CCDC187A0A096LP49 RNA5SP215-201ENST00000363440 122 ntBASIC0.62□□□□□ -2.31
CCDC187A0A096LP49 AL157398.1-201ENST00000452981 186 ntBASIC0.62□□□□□ -2.31
CCDC187A0A096LP49 SCARNA21.1-201ENST00000515996 128 ntBASIC0.62□□□□□ -2.31
CCDC187A0A096LP49 MIR4711-201ENST00000578274 70 ntBASIC0.62□□□□□ -2.31
CCDC187A0A096LP49 RNA5SP299-201ENST00000391203 116 ntBASIC0.61□□□□□ -2.31
CCDC187A0A096LP49 SNORD110-201ENST00000408189 75 ntBASIC0.61□□□□□ -2.31
CCDC187A0A096LP49 AC006210.1-201ENST00000424882 111 ntBASIC0.61□□□□□ -2.31
CCDC187A0A096LP49 AC079150.2-201ENST00000443733 78 ntBASIC0.61□□□□□ -2.31
CCDC187A0A096LP49 RNA5SP121-201ENST00000516537 101 ntBASIC0.61□□□□□ -2.31
CCDC187A0A096LP49 MIR4473-201ENST00000583731 91 ntBASIC0.61□□□□□ -2.31
CCDC187A0A096LP49 SNORD118-201ENST00000363593 134 ntBASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 SNORA25.5-201ENST00000363782 126 ntBASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 SNORA63.6-201ENST00000364921 119 ntBASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 AC069271.1-201ENST00000445577 156 ntBASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 AC021146.9-201ENST00000512503 156 ntBASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 U2.7-201ENST00000619197 100 ntBASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 AC243829.3-201ENST00000622177 108 ntBASIC0.6□□□□□ -2.31
CCDC187A0A096LP49 SNORA33.1-201ENST00000364957 130 ntBASIC0.59□□□□□ -2.31
CCDC187A0A096LP49 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
CCDC187A0A096LP49 RNA5SP193-201ENST00000410353 107 ntBASIC0.59□□□□□ -2.31
CCDC187A0A096LP49 RNU7-174P-201ENST00000516248 59 ntBASIC0.59□□□□□ -2.31
CCDC187A0A096LP49 RNU4-54P-201ENST00000516428 129 ntBASIC0.59□□□□□ -2.31
CCDC187A0A096LP49 MIR5706-201ENST00000579841 80 ntBASIC0.59□□□□□ -2.31
CCDC187A0A096LP49 MIR924-201ENST00000638017 53 ntBASIC0.59□□□□□ -2.31
CCDC187A0A096LP49 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.32
CCDC187A0A096LP49 Y_RNA.125-201ENST00000363371 111 ntBASIC0.58□□□□□ -2.32
CCDC187A0A096LP49 RNA5SP192-201ENST00000364404 120 ntBASIC0.58□□□□□ -2.32
CCDC187A0A096LP49 RNU6-1162P-201ENST00000384443 104 ntBASIC0.58□□□□□ -2.32
CCDC187A0A096LP49 MIR633-201ENST00000384821 98 ntBASIC0.58□□□□□ -2.32
CCDC187A0A096LP49 U4.4-201ENST00000620626 117 ntBASIC0.58□□□□□ -2.32
CCDC187A0A096LP49 SNORA15B-2-201ENST00000384058 135 ntBASIC0.57□□□□□ -2.32
CCDC187A0A096LP49 SNORA15B-1-201ENST00000384334 135 ntBASIC0.57□□□□□ -2.32
CCDC187A0A096LP49 SNORA75.1-201ENST00000391130 148 ntBASIC0.57□□□□□ -2.32
CCDC187A0A096LP49 SNORA40.8-201ENST00000411034 126 ntBASIC0.57□□□□□ -2.32
CCDC187A0A096LP49 SNORD71-201ENST00000411292 86 ntBASIC0.57□□□□□ -2.32
CCDC187A0A096LP49 SNORA25.18-201ENST00000607153 114 ntBASIC0.57□□□□□ -2.32
CCDC187A0A096LP49 MIR5087-201ENST00000635826 76 ntBASIC0.57□□□□□ -2.32
CCDC187A0A096LP49 RNU6-446P-201ENST00000362827 106 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 RNA5SP457-201ENST00000363657 124 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 RNU6-829P-201ENST00000363700 112 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 SNORA49-201ENST00000386157 136 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 RNU6-1232P-201ENST00000516299 86 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 RNU6-122P-201ENST00000516818 107 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 MIR6755-201ENST00000619993 66 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 AC090617.8-201ENST00000623339 167 ntBASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.56□□□□□ -2.32
CCDC187A0A096LP49 Y_RNA.374-201ENST00000365606 101 ntBASIC0.55□□□□□ -2.32
CCDC187A0A096LP49 MIR516B1-201ENST00000385211 90 ntBASIC0.55□□□□□ -2.32
CCDC187A0A096LP49 MTND4LP19-201ENST00000403051 166 ntBASIC0.55□□□□□ -2.32
CCDC187A0A096LP49 SNORD60.1-201ENST00000362451 73 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 RNU6-1079P-201ENST00000362861 110 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 RNU6-698P-201ENST00000363523 107 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 RNU6-34P-201ENST00000364874 107 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 RNU6-987P-201ENST00000384759 104 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 MIR518A1-201ENST00000385068 85 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 AC244090.1-201ENST00000441884 93 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 RNU6-229P-201ENST00000516614 102 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 MIR466-201ENST00000580653 84 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 MIR548V-201ENST00000584165 80 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 RNU6-92P-201ENST00000605893 104 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 uc_338.10-201ENST00000621872 182 ntBASIC0.54□□□□□ -2.32
CCDC187A0A096LP49 Y_RNA.115-201ENST00000363272 98 ntBASIC0.53□□□□□ -2.32
CCDC187A0A096LP49 RNU6-940P-201ENST00000363433 104 ntBASIC0.53□□□□□ -2.32
CCDC187A0A096LP49 RNA5SP499-201ENST00000363982 119 ntBASIC0.53□□□□□ -2.32
CCDC187A0A096LP49 MIR630-201ENST00000384957 97 ntBASIC0.53□□□□□ -2.32
CCDC187A0A096LP49 MIR501-201ENST00000390204 84 ntBASIC0.53□□□□□ -2.32
CCDC187A0A096LP49 RNU6-175P-201ENST00000516896 107 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 205.9 ms