Protein–RNA interactions for Protein: R4GMX3

COMMD3-BMI1, COMMD3-BMI1 readthrough, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1R4GMX3 SNORA62.4-201ENST00000365504 151 ntBASIC-1.13□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU6-196P-201ENST00000384315 107 ntBASIC-1.13□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU6-592P-201ENST00000411333 103 ntBASIC-1.13□□□□□ -2.59
COMMD3-BMI1R4GMX3 SNORD42B-201ENST00000458893 67 ntBASIC-1.13□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIR198-201ENST00000637333 62 ntBASIC-1.13□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIR365A-201ENST00000362260 87 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 SNORA63.2-201ENST00000362603 126 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 SNORD115-23-201ENST00000364461 82 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU7-134P-201ENST00000458997 64 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU6-479P-201ENST00000516348 105 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIR4679-2-201ENST00000578358 77 ntBASIC-1.14□□□□□ -2.59
COMMD3-BMI1R4GMX3 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU6-495P-201ENST00000362995 107 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU6-200P-201ENST00000364743 107 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIRLET7B-201ENST00000385140 83 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 RNU7-24P-201ENST00000458867 62 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIR4770-201ENST00000579149 58 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIR4503-201ENST00000582187 83 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIR4441-201ENST00000582623 100 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 MIR8068-201ENST00000618032 68 ntBASIC-1.15□□□□□ -2.59
COMMD3-BMI1R4GMX3 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.16□□□□□ -2.6
COMMD3-BMI1R4GMX3 MIR577-201ENST00000385196 96 ntBASIC-1.16□□□□□ -2.6
COMMD3-BMI1R4GMX3 FGF7P7-201ENST00000514120 227 ntBASIC-1.16□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-781P-201ENST00000516377 101 ntBASIC-1.16□□□□□ -2.6
COMMD3-BMI1R4GMX3 AC025521.1-201ENST00000621624 286 ntBASIC-1.16□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNY3P2-201ENST00000362918 102 ntBASIC-1.17□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-394P-201ENST00000410735 107 ntBASIC-1.17□□□□□ -2.6
COMMD3-BMI1R4GMX3 MTND3P2-201ENST00000438452 342 ntBASIC-1.17□□□□□ -2.6
COMMD3-BMI1R4GMX3 AC021146.9-201ENST00000512503 156 ntBASIC-1.17□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-832P-201ENST00000363319 107 ntBASIC-1.18□□□□□ -2.6
COMMD3-BMI1R4GMX3 SNORD58C-201ENST00000365223 64 ntBASIC-1.18□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-644P-201ENST00000391155 98 ntBASIC-1.18□□□□□ -2.6
COMMD3-BMI1R4GMX3 YWHAEP3-201ENST00000582767 121 ntBASIC-1.18□□□□□ -2.6
COMMD3-BMI1R4GMX3 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 SNORD116-18-201ENST00000383961 92 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-905P-201ENST00000384434 107 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-540P-201ENST00000384622 101 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 MIR889-201ENST00000401280 79 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 AC097510.1-201ENST00000510945 133 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 AL513043.2-201ENST00000573941 143 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.19□□□□□ -2.6
COMMD3-BMI1R4GMX3 SNORD45B-201ENST00000364617 72 ntBASIC-1.2□□□□□ -2.6
COMMD3-BMI1R4GMX3 SNORD75.2-201ENST00000408784 58 ntBASIC-1.2□□□□□ -2.6
COMMD3-BMI1R4GMX3 MIR1468-201ENST00000410600 86 ntBASIC-1.2□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU7-85P-201ENST00000458851 63 ntBASIC-1.2□□□□□ -2.6
COMMD3-BMI1R4GMX3 SNORD18.2-201ENST00000459604 70 ntBASIC-1.2□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-62P-201ENST00000516526 102 ntBASIC-1.2□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.21□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.21□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-337P-201ENST00000391243 106 ntBASIC-1.21□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.21□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-719P-201ENST00000516671 104 ntBASIC-1.21□□□□□ -2.6
COMMD3-BMI1R4GMX3 AC068339.1-201ENST00000526965 141 ntBASIC-1.21□□□□□ -2.6
COMMD3-BMI1R4GMX3 U4.2-201ENST00000618561 85 ntBASIC-1.21□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-694P-201ENST00000364071 147 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 SNORD114-17-201ENST00000364699 75 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNA5SP272-201ENST00000516095 111 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 MIR3064-201ENST00000581130 66 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.22□□□□□ -2.6
COMMD3-BMI1R4GMX3 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.23□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.23□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.23□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.23□□□□□ -2.61
COMMD3-BMI1R4GMX3 RNU6-983P-201ENST00000516004 103 ntBASIC-1.23□□□□□ -2.61
COMMD3-BMI1R4GMX3 AC104996.3-201ENST00000590718 94 ntBASIC-1.23□□□□□ -2.61
COMMD3-BMI1R4GMX3 MIR6502-201ENST00000617296 76 ntBASIC-1.23□□□□□ -2.61
COMMD3-BMI1R4GMX3 SNORA24B-201ENST00000384176 131 ntBASIC-1.24□□□□□ -2.61
COMMD3-BMI1R4GMX3 RNU6-463P-201ENST00000384340 107 ntBASIC-1.24□□□□□ -2.61
COMMD3-BMI1R4GMX3 MIR569-201ENST00000385228 96 ntBASIC-1.24□□□□□ -2.61
COMMD3-BMI1R4GMX3 MIR527-201ENST00000385244 85 ntBASIC-1.24□□□□□ -2.61
COMMD3-BMI1R4GMX3 AC006254.2-201ENST00000603259 279 ntBASIC-1.24□□□□□ -2.61
COMMD3-BMI1R4GMX3 AC004792.1-201ENST00000614523 137 ntBASIC-1.24□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 RNU6-132P-201ENST00000383863 107 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 RNU6-813P-201ENST00000384691 107 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 MIR548A1-201ENST00000385041 97 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 AL445584.3-201ENST00000617173 78 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 U6.96-201ENST00000636425 70 ntBASIC-1.25□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.26□□□□□ -2.61
COMMD3-BMI1R4GMX3 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.26□□□□□ -2.61
COMMD3-BMI1R4GMX3 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.26□□□□□ -2.61
COMMD3-BMI1R4GMX3 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.26□□□□□ -2.61
COMMD3-BMI1R4GMX3 MT-TG-201ENST00000387429 68 ntBASIC-1.26□□□□□ -2.61
COMMD3-BMI1R4GMX3 SNORD4B-201ENST00000459083 72 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 214.1 ms