Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 SNORD99-201ENST00000408612 74 ntBASIC1.2□□□□□ -2.22
TNFRSF11AQ9Y6Q6 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.2□□□□□ -2.22
TNFRSF11AQ9Y6Q6 AC069503.3-201ENST00000618674 145 ntBASIC1.2□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6-895P-201ENST00000384125 103 ntBASIC1.19□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6-540P-201ENST00000384622 101 ntBASIC1.19□□□□□ -2.22
TNFRSF11AQ9Y6Q6 SNORD30.1-201ENST00000391309 70 ntBASIC1.19□□□□□ -2.22
TNFRSF11AQ9Y6Q6 AC011195.1-201ENST00000578177 177 ntBASIC1.19□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6-1335P-201ENST00000365426 107 ntBASIC1.18□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6-663P-201ENST00000391105 106 ntBASIC1.18□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.18□□□□□ -2.22
TNFRSF11AQ9Y6Q6 MIR4698-201ENST00000577795 80 ntBASIC1.18□□□□□ -2.22
TNFRSF11AQ9Y6Q6 AL353765.1-201ENST00000605514 183 ntBASIC1.18□□□□□ -2.22
TNFRSF11AQ9Y6Q6 Y_RNA.250-201ENST00000364542 110 ntBASIC1.17□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6V-201ENST00000384105 107 ntBASIC1.17□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNA5SP227-201ENST00000516184 113 ntBASIC1.17□□□□□ -2.22
TNFRSF11AQ9Y6Q6 MIR5000-201ENST00000577717 103 ntBASIC1.17□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6-716P-201ENST00000365621 103 ntBASIC1.16□□□□□ -2.22
TNFRSF11AQ9Y6Q6 MIR216A-201ENST00000385063 110 ntBASIC1.16□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6-269P-201ENST00000391077 97 ntBASIC1.16□□□□□ -2.22
TNFRSF11AQ9Y6Q6 MIR6509-201ENST00000614603 85 ntBASIC1.16□□□□□ -2.22
TNFRSF11AQ9Y6Q6 U6.111-201ENST00000636093 83 ntBASIC1.16□□□□□ -2.22
TNFRSF11AQ9Y6Q6 RNU6-1216P-201ENST00000362590 107 ntBASIC1.15□□□□□ -2.23
TNFRSF11AQ9Y6Q6 SNORD115-22-201ENST00000364456 82 ntBASIC1.15□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNA5SP436-201ENST00000516020 115 ntBASIC1.15□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNA5SP268-201ENST00000516828 124 ntBASIC1.15□□□□□ -2.23
TNFRSF11AQ9Y6Q6 SNORD115-31-201ENST00000365318 82 ntBASIC1.14□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6-260P-201ENST00000384092 107 ntBASIC1.14□□□□□ -2.23
TNFRSF11AQ9Y6Q6 AC125388.1-201ENST00000459631 156 ntBASIC1.14□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6-881P-201ENST00000516813 102 ntBASIC1.14□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNA5SP94-201ENST00000516917 108 ntBASIC1.14□□□□□ -2.23
TNFRSF11AQ9Y6Q6 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6-54P-201ENST00000365563 107 ntBASIC1.13□□□□□ -2.23
TNFRSF11AQ9Y6Q6 AC211469.2-201ENST00000605461 205 ntBASIC1.13□□□□□ -2.23
TNFRSF11AQ9Y6Q6 Y_RNA.30-201ENST00000362572 97 ntBASIC1.12□□□□□ -2.23
TNFRSF11AQ9Y6Q6 SNORA2.1-201ENST00000363089 137 ntBASIC1.12□□□□□ -2.23
TNFRSF11AQ9Y6Q6 SNORD113.1-201ENST00000363280 73 ntBASIC1.12□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6-800P-201ENST00000384473 103 ntBASIC1.12□□□□□ -2.23
TNFRSF11AQ9Y6Q6 MIR532-201ENST00000385025 91 ntBASIC1.12□□□□□ -2.23
TNFRSF11AQ9Y6Q6 MIR5706-201ENST00000579841 80 ntBASIC1.12□□□□□ -2.23
TNFRSF11AQ9Y6Q6 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.11□□□□□ -2.23
TNFRSF11AQ9Y6Q6 MTND4LP1-201ENST00000446263 157 ntBASIC1.11□□□□□ -2.23
TNFRSF11AQ9Y6Q6 NAMPTP3-201ENST00000569273 224 ntBASIC1.11□□□□□ -2.23
TNFRSF11AQ9Y6Q6 SNORA36.1-201ENST00000363424 132 ntBASIC1.1□□□□□ -2.23
TNFRSF11AQ9Y6Q6 SNORA25.4-201ENST00000363666 124 ntBASIC1.1□□□□□ -2.23
TNFRSF11AQ9Y6Q6 Y_RNA.178-201ENST00000363832 102 ntBASIC1.1□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6-471P-201ENST00000383944 106 ntBASIC1.1□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6-604P-201ENST00000390917 100 ntBASIC1.1□□□□□ -2.23
TNFRSF11AQ9Y6Q6 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.1□□□□□ -2.23
TNFRSF11AQ9Y6Q6 AC103810.9-201ENST00000606688 112 ntBASIC1.09□□□□□ -2.23
TNFRSF11AQ9Y6Q6 RNU6-110P-201ENST00000384508 104 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 SNORD45A-201ENST00000384512 84 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNA5SP484-201ENST00000458857 111 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 SNORD42B-201ENST00000458893 67 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNU6-848P-201ENST00000515948 107 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNU6-617P-201ENST00000516147 107 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNU6-473P-201ENST00000516164 107 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNU6-1049P-201ENST00000516414 107 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR3657-201ENST00000584818 117 ntBASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.08□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR608-201ENST00000384820 100 ntBASIC1.07□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNA5SP222-201ENST00000411039 105 ntBASIC1.07□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNA5SP457-201ENST00000363657 124 ntBASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 Y_RNA.386-201ENST00000383913 105 ntBASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 Y_RNA.407-201ENST00000383986 113 ntBASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 Y_RNA.443-201ENST00000384135 111 ntBASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR193B-201ENST00000384907 83 ntBASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 CYP3A137P-201ENST00000562436 69 ntBASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
TNFRSF11AQ9Y6Q6 RNU6-630P-201ENST00000391258 106 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 AC006210.1-201ENST00000424882 111 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 OR2A41P-201ENST00000473586 105 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 AC018659.1-201ENST00000551083 169 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 U7.6-201ENST00000610841 64 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR7107-201ENST00000611489 80 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR6857-201ENST00000613267 93 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR6739-201ENST00000622461 75 ntBASIC1.05□□□□□ -2.24
TNFRSF11AQ9Y6Q6 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR140-201ENST00000385282 100 ntBASIC1.04□□□□□ -2.24
TNFRSF11AQ9Y6Q6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
TNFRSF11AQ9Y6Q6 SNORD110-201ENST00000408189 75 ntBASIC1.04□□□□□ -2.24
TNFRSF11AQ9Y6Q6 MIR1273G-201ENST00000577677 100 ntBASIC1.04□□□□□ -2.24
TNFRSF11AQ9Y6Q6 AC103706.3-201ENST00000636297 85 ntBASIC1.04□□□□□ -2.24
TNFRSF11AQ9Y6Q6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.04□□□□□ -2.24
TNFRSF11AQ9Y6Q6 Y_RNA.340-201ENST00000365330 92 ntBASIC1.03□□□□□ -2.24
TNFRSF11AQ9Y6Q6 AC005520.4-201ENST00000604337 90 ntBASIC1.03□□□□□ -2.24
TNFRSF11AQ9Y6Q6 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
TNFRSF11AQ9Y6Q6 AL590095.2-201ENST00000604136 117 ntBASIC1.02□□□□□ -2.25
TNFRSF11AQ9Y6Q6 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.02□□□□□ -2.25
TNFRSF11AQ9Y6Q6 SNORA15B-2-201ENST00000384058 135 ntBASIC1.01□□□□□ -2.25
TNFRSF11AQ9Y6Q6 SNORA15B-1-201ENST00000384334 135 ntBASIC1.01□□□□□ -2.25
TNFRSF11AQ9Y6Q6 RNU6-1162P-201ENST00000384443 104 ntBASIC1.01□□□□□ -2.25
TNFRSF11AQ9Y6Q6 SNORD116-24-201ENST00000384549 92 ntBASIC1.01□□□□□ -2.25
TNFRSF11AQ9Y6Q6 SCARNA17.3-201ENST00000516381 125 ntBASIC1.01□□□□□ -2.25
TNFRSF11AQ9Y6Q6 RNU5B-6P-201ENST00000516765 68 ntBASIC1.01□□□□□ -2.25
TNFRSF11AQ9Y6Q6 RNU6-668P-201ENST00000364180 107 ntBASIC1□□□□□ -2.25
TNFRSF11AQ9Y6Q6 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1□□□□□ -2.25
TNFRSF11AQ9Y6Q6 SNORA40.8-201ENST00000411034 126 ntBASIC1□□□□□ -2.25
TNFRSF11AQ9Y6Q6 AC092634.7-201ENST00000621022 103 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 254.6 ms