Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 NAMPTP3-201ENST00000569273 224 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 AC011195.1-201ENST00000578177 177 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 SNORD114-21-201ENST00000606412 72 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 MIR8053-201ENST00000613344 75 ntBASIC1.1□□□□□ -2.23
PCDHA11Q9Y5I1 MT-TY-201ENST00000387409 66 ntBASIC1.09□□□□□ -2.23
PCDHA11Q9Y5I1 MIR3973-201ENST00000579824 107 ntBASIC1.09□□□□□ -2.23
PCDHA11Q9Y5I1 SNORD115-22-201ENST00000364456 82 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 RNU4-38P-201ENST00000364472 129 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 RNU1-141P-201ENST00000364623 158 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 RNU6-1039P-201ENST00000383931 107 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 SNORA8.2-201ENST00000384372 139 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 RNU6-269P-201ENST00000391077 97 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 SNORD30.1-201ENST00000391309 70 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 MIR4460-201ENST00000577862 86 ntBASIC1.08□□□□□ -2.24
PCDHA11Q9Y5I1 Y_RNA.30-201ENST00000362572 97 ntBASIC1.07□□□□□ -2.24
PCDHA11Q9Y5I1 SNORD45A-201ENST00000384512 84 ntBASIC1.07□□□□□ -2.24
PCDHA11Q9Y5I1 RNU6-604P-201ENST00000390917 100 ntBASIC1.07□□□□□ -2.24
PCDHA11Q9Y5I1 RNU6-663P-201ENST00000391105 106 ntBASIC1.07□□□□□ -2.24
PCDHA11Q9Y5I1 AL162376.1-201ENST00000624117 175 ntBASIC1.07□□□□□ -2.24
PCDHA11Q9Y5I1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
PCDHA11Q9Y5I1 MIR6509-201ENST00000614603 85 ntBASIC1.06□□□□□ -2.24
PCDHA11Q9Y5I1 SNORA36.1-201ENST00000363424 132 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 RNU6-895P-201ENST00000384125 103 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 MIR193B-201ENST00000384907 83 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 SNORD42B-201ENST00000458893 67 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 RNA5SP227-201ENST00000516184 113 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 RNU6-881P-201ENST00000516813 102 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 U6.111-201ENST00000636093 83 ntBASIC1.05□□□□□ -2.24
PCDHA11Q9Y5I1 RNA5SP94-201ENST00000516917 108 ntBASIC1.04□□□□□ -2.24
PCDHA11Q9Y5I1 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
PCDHA11Q9Y5I1 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
PCDHA11Q9Y5I1 Y_RNA.386-201ENST00000383913 105 ntBASIC1.03□□□□□ -2.24
PCDHA11Q9Y5I1 RNA5SP484-201ENST00000458857 111 ntBASIC1.03□□□□□ -2.24
PCDHA11Q9Y5I1 MIR1273G-201ENST00000577677 100 ntBASIC1.03□□□□□ -2.24
PCDHA11Q9Y5I1 AC103810.9-201ENST00000606688 112 ntBASIC1.03□□□□□ -2.24
PCDHA11Q9Y5I1 SNORD113.1-201ENST00000363280 73 ntBASIC1.02□□□□□ -2.25
PCDHA11Q9Y5I1 RNA5SP457-201ENST00000363657 124 ntBASIC1.02□□□□□ -2.25
PCDHA11Q9Y5I1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
PCDHA11Q9Y5I1 RNA5SP268-201ENST00000516828 124 ntBASIC1.02□□□□□ -2.25
PCDHA11Q9Y5I1 AC069503.3-201ENST00000618674 145 ntBASIC1.02□□□□□ -2.25
PCDHA11Q9Y5I1 RNU6-800P-201ENST00000384473 103 ntBASIC1.01□□□□□ -2.25
PCDHA11Q9Y5I1 MIR203A-201ENST00000384836 110 ntBASIC1.01□□□□□ -2.25
PCDHA11Q9Y5I1 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
PCDHA11Q9Y5I1 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
PCDHA11Q9Y5I1 AC073869.9-201ENST00000641610 120 ntBASIC1.01□□□□□ -2.25
PCDHA11Q9Y5I1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1□□□□□ -2.25
PCDHA11Q9Y5I1 MIR608-201ENST00000384820 100 ntBASIC1□□□□□ -2.25
PCDHA11Q9Y5I1 RNA5SP222-201ENST00000411039 105 ntBASIC1□□□□□ -2.25
PCDHA11Q9Y5I1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1□□□□□ -2.25
PCDHA11Q9Y5I1 MIR4714-201ENST00000580728 77 ntBASIC1□□□□□ -2.25
PCDHA11Q9Y5I1 MIR3657-201ENST00000584818 117 ntBASIC1□□□□□ -2.25
PCDHA11Q9Y5I1 MIR7107-201ENST00000611489 80 ntBASIC1□□□□□ -2.25
PCDHA11Q9Y5I1 RNU6-1216P-201ENST00000362590 107 ntBASIC0.99□□□□□ -2.25
PCDHA11Q9Y5I1 RNU5B-6P-201ENST00000516765 68 ntBASIC0.99□□□□□ -2.25
PCDHA11Q9Y5I1 RNU6-260P-201ENST00000384092 107 ntBASIC0.98□□□□□ -2.25
PCDHA11Q9Y5I1 SNORD116-24-201ENST00000384549 92 ntBASIC0.98□□□□□ -2.25
PCDHA11Q9Y5I1 AC125388.1-201ENST00000459631 156 ntBASIC0.98□□□□□ -2.25
PCDHA11Q9Y5I1 MIR4698-201ENST00000577795 80 ntBASIC0.98□□□□□ -2.25
PCDHA11Q9Y5I1 MIR6513-201ENST00000621188 64 ntBASIC0.98□□□□□ -2.25
PCDHA11Q9Y5I1 SNORD114-4-201ENST00000363962 75 ntBASIC0.97□□□□□ -2.25
PCDHA11Q9Y5I1 AC018659.1-201ENST00000551083 169 ntBASIC0.97□□□□□ -2.25
PCDHA11Q9Y5I1 AC005520.4-201ENST00000604337 90 ntBASIC0.97□□□□□ -2.25
PCDHA11Q9Y5I1 SNORA2.1-201ENST00000363089 137 ntBASIC0.96□□□□□ -2.26
PCDHA11Q9Y5I1 Y_RNA.340-201ENST00000365330 92 ntBASIC0.96□□□□□ -2.26
PCDHA11Q9Y5I1 Y_RNA.443-201ENST00000384135 111 ntBASIC0.96□□□□□ -2.26
PCDHA11Q9Y5I1 RNU6-630P-201ENST00000391258 106 ntBASIC0.96□□□□□ -2.26
PCDHA11Q9Y5I1 MIR1265-201ENST00000408444 86 ntBASIC0.96□□□□□ -2.26
PCDHA11Q9Y5I1 RNU6-982P-201ENST00000516216 102 ntBASIC0.96□□□□□ -2.26
PCDHA11Q9Y5I1 SNORA25.4-201ENST00000363666 124 ntBASIC0.95□□□□□ -2.26
PCDHA11Q9Y5I1 Y_RNA.178-201ENST00000363832 102 ntBASIC0.95□□□□□ -2.26
PCDHA11Q9Y5I1 RNU6-990P-201ENST00000364385 104 ntBASIC0.95□□□□□ -2.26
PCDHA11Q9Y5I1 ACA64.5-201ENST00000516207 127 ntBASIC0.95□□□□□ -2.26
PCDHA11Q9Y5I1 SNORA40.17-201ENST00000517256 115 ntBASIC0.95□□□□□ -2.26
PCDHA11Q9Y5I1 RNY1P8-201ENST00000383970 114 ntBASIC0.94□□□□□ -2.26
PCDHA11Q9Y5I1 AC006210.1-201ENST00000424882 111 ntBASIC0.94□□□□□ -2.26
PCDHA11Q9Y5I1 SNORA36.2-201ENST00000384004 127 ntBASIC0.93□□□□□ -2.26
PCDHA11Q9Y5I1 MIR936-201ENST00000401264 98 ntBASIC0.93□□□□□ -2.26
PCDHA11Q9Y5I1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.93□□□□□ -2.26
PCDHA11Q9Y5I1 AC010487.4-201ENST00000637027 61 ntBASIC0.93□□□□□ -2.26
PCDHA11Q9Y5I1 Y_RNA.115-201ENST00000363272 98 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 SNORD114-23-201ENST00000363536 72 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 RNU6-471P-201ENST00000383944 106 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 Y_RNA.407-201ENST00000383986 113 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 RNU6-110P-201ENST00000384508 104 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 MIR140-201ENST00000385282 100 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 SNORD110-201ENST00000408189 75 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 MTND4LP1-201ENST00000446263 157 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 MIR924-201ENST00000638017 53 ntBASIC0.92□□□□□ -2.26
PCDHA11Q9Y5I1 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.91□□□□□ -2.26
PCDHA11Q9Y5I1 RNA5SP517-201ENST00000364724 117 ntBASIC0.91□□□□□ -2.26
PCDHA11Q9Y5I1 Y_RNA.250-201ENST00000364542 110 ntBASIC0.9□□□□□ -2.27
PCDHA11Q9Y5I1 RNU6-645P-201ENST00000364649 106 ntBASIC0.9□□□□□ -2.27
PCDHA11Q9Y5I1 RNA5SP147-201ENST00000516493 109 ntBASIC0.9□□□□□ -2.27
PCDHA11Q9Y5I1 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
PCDHA11Q9Y5I1 RNA5SP330-201ENST00000517096 96 ntBASIC0.89□□□□□ -2.27
PCDHA11Q9Y5I1 MIR4752-201ENST00000579672 72 ntBASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 191.8 ms