Protein–RNA interactions for Protein: Q9Y546

LRRC42, Leucine-rich repeat-containing protein 42, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42Q9Y546 AC068339.1-201ENST00000526965 141 ntBASIC-1.1□□□□□ -2.59
LRRC42Q9Y546 RNU6-208P-201ENST00000362431 107 ntBASIC-1.11□□□□□ -2.59
LRRC42Q9Y546 RNU7-24P-201ENST00000458867 62 ntBASIC-1.11□□□□□ -2.59
LRRC42Q9Y546 RNU6-772P-201ENST00000516042 105 ntBASIC-1.11□□□□□ -2.59
LRRC42Q9Y546 SCARNA17-201ENST00000516183 144 ntBASIC-1.11□□□□□ -2.59
LRRC42Q9Y546 AL353803.5-201ENST00000599815 141 ntBASIC-1.11□□□□□ -2.59
LRRC42Q9Y546 MIR6888-201ENST00000621977 67 ntBASIC-1.11□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 SNORA62.4-201ENST00000365504 151 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 RNA5SP292-201ENST00000390974 118 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 RNU6-644P-201ENST00000391155 98 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 SNORD4B-201ENST00000459083 72 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 RNU6-388P-201ENST00000517012 105 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 RNU6-389P-201ENST00000517048 105 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 AC103810.7-201ENST00000607821 91 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 AL445584.3-201ENST00000617173 78 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 U6.96-201ENST00000636425 70 ntBASIC-1.12□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.144-201ENST00000363521 113 ntBASIC-1.13□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.188-201ENST00000363952 111 ntBASIC-1.13□□□□□ -2.59
LRRC42Q9Y546 SNORD45B-201ENST00000364617 72 ntBASIC-1.13□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.13□□□□□ -2.59
LRRC42Q9Y546 MIR548A1-201ENST00000385041 97 ntBASIC-1.13□□□□□ -2.59
LRRC42Q9Y546 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.13□□□□□ -2.59
LRRC42Q9Y546 RNU6-426P-201ENST00000516464 97 ntBASIC-1.13□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.14□□□□□ -2.59
LRRC42Q9Y546 SNORD95.1-201ENST00000364099 68 ntBASIC-1.14□□□□□ -2.59
LRRC42Q9Y546 RNA5SP368-201ENST00000364298 116 ntBASIC-1.14□□□□□ -2.59
LRRC42Q9Y546 RNU6-813P-201ENST00000384691 107 ntBASIC-1.14□□□□□ -2.59
LRRC42Q9Y546 snoU13.17-201ENST00000458802 104 ntBASIC-1.14□□□□□ -2.59
LRRC42Q9Y546 RNU6-274P-201ENST00000459566 107 ntBASIC-1.14□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.15□□□□□ -2.59
LRRC42Q9Y546 RNU6-382P-201ENST00000365181 106 ntBASIC-1.15□□□□□ -2.59
LRRC42Q9Y546 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.15□□□□□ -2.59
LRRC42Q9Y546 MTND4LP9-201ENST00000427694 174 ntBASIC-1.15□□□□□ -2.59
LRRC42Q9Y546 MTND5P41-201ENST00000517498 206 ntBASIC-1.15□□□□□ -2.59
LRRC42Q9Y546 AL157777.2-201ENST00000258070 137 ntBASIC-1.16□□□□□ -2.6
LRRC42Q9Y546 SNORA33.1-201ENST00000364957 130 ntBASIC-1.16□□□□□ -2.6
LRRC42Q9Y546 RNU6-62P-201ENST00000516526 102 ntBASIC-1.16□□□□□ -2.6
LRRC42Q9Y546 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.16□□□□□ -2.6
LRRC42Q9Y546 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.17□□□□□ -2.6
LRRC42Q9Y546 Y_RNA.563-201ENST00000384707 108 ntBASIC-1.17□□□□□ -2.6
LRRC42Q9Y546 RNA5SP147-201ENST00000516493 109 ntBASIC-1.17□□□□□ -2.6
LRRC42Q9Y546 MIR378F-201ENST00000578143 78 ntBASIC-1.17□□□□□ -2.6
LRRC42Q9Y546 MIR548Z-201ENST00000584743 97 ntBASIC-1.17□□□□□ -2.6
LRRC42Q9Y546 RNU6-824P-201ENST00000363724 104 ntBASIC-1.18□□□□□ -2.6
LRRC42Q9Y546 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
LRRC42Q9Y546 RNU6-519P-201ENST00000410590 108 ntBASIC-1.18□□□□□ -2.6
LRRC42Q9Y546 RNA5SP470-201ENST00000516463 106 ntBASIC-1.18□□□□□ -2.6
LRRC42Q9Y546 snoU83B.1-201ENST00000517136 88 ntBASIC-1.18□□□□□ -2.6
LRRC42Q9Y546 MIR5009-201ENST00000578736 100 ntBASIC-1.18□□□□□ -2.6
LRRC42Q9Y546 RNY4P3-201ENST00000365254 95 ntBASIC-1.19□□□□□ -2.6
LRRC42Q9Y546 MIR203A-201ENST00000384836 110 ntBASIC-1.19□□□□□ -2.6
LRRC42Q9Y546 MT-TG-201ENST00000387429 68 ntBASIC-1.19□□□□□ -2.6
LRRC42Q9Y546 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.19□□□□□ -2.6
LRRC42Q9Y546 RNU6-1039P-201ENST00000383931 107 ntBASIC-1.2□□□□□ -2.6
LRRC42Q9Y546 RNU6-260P-201ENST00000384092 107 ntBASIC-1.2□□□□□ -2.6
LRRC42Q9Y546 MIR1255B2-201ENST00000408618 67 ntBASIC-1.2□□□□□ -2.6
LRRC42Q9Y546 Y_RNA.649-201ENST00000459077 103 ntBASIC-1.2□□□□□ -2.6
LRRC42Q9Y546 SNORA18.5-201ENST00000516616 101 ntBASIC-1.2□□□□□ -2.6
LRRC42Q9Y546 MIR4777-201ENST00000583710 86 ntBASIC-1.2□□□□□ -2.6
LRRC42Q9Y546 AL353621.2-201ENST00000605340 133 ntBASIC-1.2□□□□□ -2.6
LRRC42Q9Y546 RNU6-746P-201ENST00000384112 109 ntBASIC-1.21□□□□□ -2.6
LRRC42Q9Y546 RNU7-107P-201ENST00000459121 61 ntBASIC-1.21□□□□□ -2.6
LRRC42Q9Y546 AC006254.2-201ENST00000603259 279 ntBASIC-1.21□□□□□ -2.6
LRRC42Q9Y546 Y_RNA.68-201ENST00000362881 102 ntBASIC-1.22□□□□□ -2.6
LRRC42Q9Y546 RNU6-1014P-201ENST00000383940 103 ntBASIC-1.22□□□□□ -2.6
LRRC42Q9Y546 MIR548I1-201ENST00000408810 149 ntBASIC-1.22□□□□□ -2.6
LRRC42Q9Y546 RNU7-134P-201ENST00000458997 64 ntBASIC-1.22□□□□□ -2.6
LRRC42Q9Y546 RNY1P9-201ENST00000532431 109 ntBASIC-1.22□□□□□ -2.6
LRRC42Q9Y546 MIR3657-201ENST00000584818 117 ntBASIC-1.22□□□□□ -2.6
LRRC42Q9Y546 MIR4773-1-201ENST00000637203 78 ntBASIC-1.22□□□□□ -2.6
LRRC42Q9Y546 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.23□□□□□ -2.61
LRRC42Q9Y546 SNORA2.1-201ENST00000363089 137 ntBASIC-1.23□□□□□ -2.61
LRRC42Q9Y546 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.23□□□□□ -2.61
LRRC42Q9Y546 Y_RNA.525-201ENST00000384570 113 ntBASIC-1.23□□□□□ -2.61
LRRC42Q9Y546 SNORA40-201ENST00000388090 126 ntBASIC-1.23□□□□□ -2.61
LRRC42Q9Y546 MTATP6P29-201ENST00000415057 132 ntBASIC-1.23□□□□□ -2.61
LRRC42Q9Y546 RNU6-886P-201ENST00000384319 105 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 RNU6-257P-201ENST00000410238 98 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 SNORD63.1-201ENST00000516178 80 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 RNU6-795P-201ENST00000516323 103 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 RNU6-182P-201ENST00000516970 105 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 MIR6509-201ENST00000614603 85 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 AC012531.4-201ENST00000616509 177 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 MIR3914-2-201ENST00000637339 95 ntBASIC-1.24□□□□□ -2.61
LRRC42Q9Y546 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.25□□□□□ -2.61
LRRC42Q9Y546 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.25□□□□□ -2.61
LRRC42Q9Y546 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.25□□□□□ -2.61
LRRC42Q9Y546 MIR1265-201ENST00000408444 86 ntBASIC-1.25□□□□□ -2.61
LRRC42Q9Y546 SNORD33.1-201ENST00000516213 88 ntBASIC-1.25□□□□□ -2.61
LRRC42Q9Y546 CYP3A54P-201ENST00000566950 75 ntBASIC-1.25□□□□□ -2.61
LRRC42Q9Y546 RNU5F-1-201ENST00000362507 117 ntBASIC-1.26□□□□□ -2.61
LRRC42Q9Y546 SNORA26.4-201ENST00000391188 123 ntBASIC-1.26□□□□□ -2.61
LRRC42Q9Y546 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.26□□□□□ -2.61
LRRC42Q9Y546 RNA5SP25-201ENST00000410815 110 ntBASIC-1.26□□□□□ -2.61
LRRC42Q9Y546 RNU4-32P-201ENST00000363404 141 ntBASIC-1.27□□□□□ -2.61
LRRC42Q9Y546 SNORD115-22-201ENST00000364456 82 ntBASIC-1.27□□□□□ -2.61
LRRC42Q9Y546 Y_RNA.568-201ENST00000384742 113 ntBASIC-1.27□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 336.8 ms