Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 RNA5SP47-201ENST00000517230 109 ntBASIC1.58□□□□□ -2.16
ZC3H4Q9UPT8 RN7SL793P-201ENST00000583259 296 ntBASIC1.58□□□□□ -2.16
ZC3H4Q9UPT8 RNA5SP404-201ENST00000517118 132 ntBASIC1.57□□□□□ -2.16
ZC3H4Q9UPT8 RNU6-726P-201ENST00000364680 107 ntBASIC1.56□□□□□ -2.16
ZC3H4Q9UPT8 RNU6-955P-201ENST00000410497 104 ntBASIC1.56□□□□□ -2.16
ZC3H4Q9UPT8 AC025627.3-201ENST00000582078 182 ntBASIC1.56□□□□□ -2.16
ZC3H4Q9UPT8 SNORD42B-201ENST00000458893 67 ntBASIC1.55□□□□□ -2.16
ZC3H4Q9UPT8 AC068338.1-201ENST00000565567 176 ntBASIC1.55□□□□□ -2.16
ZC3H4Q9UPT8 AC011195.1-201ENST00000578177 177 ntBASIC1.55□□□□□ -2.16
ZC3H4Q9UPT8 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
ZC3H4Q9UPT8 RNU6-471P-201ENST00000383944 106 ntBASIC1.54□□□□□ -2.16
ZC3H4Q9UPT8 MT-TY-201ENST00000387409 66 ntBASIC1.54□□□□□ -2.16
ZC3H4Q9UPT8 SCARNA16.5-201ENST00000517114 183 ntBASIC1.54□□□□□ -2.16
ZC3H4Q9UPT8 SNORD114-24-201ENST00000365029 72 ntBASIC1.53□□□□□ -2.16
ZC3H4Q9UPT8 SNORD116-24-201ENST00000384549 92 ntBASIC1.53□□□□□ -2.16
ZC3H4Q9UPT8 MTND4LP1-201ENST00000446263 157 ntBASIC1.53□□□□□ -2.16
ZC3H4Q9UPT8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.53□□□□□ -2.16
ZC3H4Q9UPT8 RNA5SP147-201ENST00000516493 109 ntBASIC1.53□□□□□ -2.16
ZC3H4Q9UPT8 MIR3657-201ENST00000584818 117 ntBASIC1.53□□□□□ -2.16
ZC3H4Q9UPT8 RNU1-124P-201ENST00000363861 145 ntBASIC1.52□□□□□ -2.17
ZC3H4Q9UPT8 RNU6-269P-201ENST00000391077 97 ntBASIC1.52□□□□□ -2.17
ZC3H4Q9UPT8 SNORD99-201ENST00000408612 74 ntBASIC1.52□□□□□ -2.17
ZC3H4Q9UPT8 RNA5SP227-201ENST00000516184 113 ntBASIC1.52□□□□□ -2.17
ZC3H4Q9UPT8 RNU6-668P-201ENST00000364180 107 ntBASIC1.51□□□□□ -2.17
ZC3H4Q9UPT8 RNU1-141P-201ENST00000364623 158 ntBASIC1.51□□□□□ -2.17
ZC3H4Q9UPT8 RNU5B-6P-201ENST00000516765 68 ntBASIC1.51□□□□□ -2.17
ZC3H4Q9UPT8 MIR5000-201ENST00000577717 103 ntBASIC1.51□□□□□ -2.17
ZC3H4Q9UPT8 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
ZC3H4Q9UPT8 RNA5SP484-201ENST00000458857 111 ntBASIC1.5□□□□□ -2.17
ZC3H4Q9UPT8 RNA5SP255-201ENST00000516370 107 ntBASIC1.5□□□□□ -2.17
ZC3H4Q9UPT8 AL109933.3-201ENST00000619095 188 ntBASIC1.5□□□□□ -2.17
ZC3H4Q9UPT8 RNU6-260P-201ENST00000384092 107 ntBASIC1.49□□□□□ -2.17
ZC3H4Q9UPT8 MIR9-2-201ENST00000384838 87 ntBASIC1.49□□□□□ -2.17
ZC3H4Q9UPT8 RNU6-990P-201ENST00000364385 104 ntBASIC1.48□□□□□ -2.17
ZC3H4Q9UPT8 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
ZC3H4Q9UPT8 MIR4661-201ENST00000582720 75 ntBASIC1.48□□□□□ -2.17
ZC3H4Q9UPT8 AC073869.9-201ENST00000641610 120 ntBASIC1.48□□□□□ -2.17
ZC3H4Q9UPT8 MIR18A-201ENST00000362310 71 ntBASIC1.46□□□□□ -2.18
ZC3H4Q9UPT8 Y_RNA.68-201ENST00000362881 102 ntBASIC1.46□□□□□ -2.18
ZC3H4Q9UPT8 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
ZC3H4Q9UPT8 Y_RNA.433-201ENST00000384089 102 ntBASIC1.46□□□□□ -2.18
ZC3H4Q9UPT8 SNORA8.2-201ENST00000384372 139 ntBASIC1.46□□□□□ -2.18
ZC3H4Q9UPT8 MIR4295-201ENST00000585286 85 ntBASIC1.46□□□□□ -2.18
ZC3H4Q9UPT8 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.46□□□□□ -2.18
ZC3H4Q9UPT8 RNU6-645P-201ENST00000364649 106 ntBASIC1.45□□□□□ -2.18
ZC3H4Q9UPT8 MIR758-201ENST00000390227 88 ntBASIC1.45□□□□□ -2.18
ZC3H4Q9UPT8 RNA5SP222-201ENST00000411039 105 ntBASIC1.45□□□□□ -2.18
ZC3H4Q9UPT8 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.45□□□□□ -2.18
ZC3H4Q9UPT8 SNORA2.1-201ENST00000363089 137 ntBASIC1.44□□□□□ -2.18
ZC3H4Q9UPT8 MIR216A-201ENST00000385063 110 ntBASIC1.44□□□□□ -2.18
ZC3H4Q9UPT8 RNU6-1187P-201ENST00000364771 110 ntBASIC1.43□□□□□ -2.18
ZC3H4Q9UPT8 AC211469.2-201ENST00000605461 205 ntBASIC1.43□□□□□ -2.18
ZC3H4Q9UPT8 RNA5SP457-201ENST00000363657 124 ntBASIC1.42□□□□□ -2.18
ZC3H4Q9UPT8 SNORD114-4-201ENST00000363962 75 ntBASIC1.42□□□□□ -2.18
ZC3H4Q9UPT8 RNA5SP268-201ENST00000516828 124 ntBASIC1.42□□□□□ -2.18
ZC3H4Q9UPT8 AC069503.3-201ENST00000618674 145 ntBASIC1.42□□□□□ -2.18
ZC3H4Q9UPT8 MIR4511-201ENST00000582784 87 ntBASIC1.41□□□□□ -2.18
ZC3H4Q9UPT8 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.41□□□□□ -2.18
ZC3H4Q9UPT8 AC103706.3-201ENST00000636297 85 ntBASIC1.41□□□□□ -2.18
ZC3H4Q9UPT8 MIR373-201ENST00000362273 69 ntBASIC1.4□□□□□ -2.18
ZC3H4Q9UPT8 AC006210.1-201ENST00000424882 111 ntBASIC1.4□□□□□ -2.18
ZC3H4Q9UPT8 AC018659.1-201ENST00000551083 169 ntBASIC1.4□□□□□ -2.18
ZC3H4Q9UPT8 MIR4473-201ENST00000583731 91 ntBASIC1.4□□□□□ -2.18
ZC3H4Q9UPT8 AL162376.1-201ENST00000624117 175 ntBASIC1.4□□□□□ -2.18
ZC3H4Q9UPT8 RNU4-45P-201ENST00000365469 141 ntBASIC1.4□□□□□ -2.19
ZC3H4Q9UPT8 RNA5SP94-201ENST00000516917 108 ntBASIC1.4□□□□□ -2.19
ZC3H4Q9UPT8 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.4□□□□□ -2.19
ZC3H4Q9UPT8 SNORA36.1-201ENST00000363424 132 ntBASIC1.39□□□□□ -2.19
ZC3H4Q9UPT8 snoU13.13-201ENST00000458842 104 ntBASIC1.39□□□□□ -2.19
ZC3H4Q9UPT8 MIR6828-201ENST00000636181 60 ntBASIC1.39□□□□□ -2.19
ZC3H4Q9UPT8 SNORA36.2-201ENST00000384004 127 ntBASIC1.38□□□□□ -2.19
ZC3H4Q9UPT8 MIR548C-201ENST00000384815 97 ntBASIC1.37□□□□□ -2.19
ZC3H4Q9UPT8 CYP3A137P-201ENST00000562436 69 ntBASIC1.37□□□□□ -2.19
ZC3H4Q9UPT8 MIR7107-201ENST00000611489 80 ntBASIC1.37□□□□□ -2.19
ZC3H4Q9UPT8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
ZC3H4Q9UPT8 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.36□□□□□ -2.19
ZC3H4Q9UPT8 OR2A41P-201ENST00000473586 105 ntBASIC1.36□□□□□ -2.19
ZC3H4Q9UPT8 MIR6857-201ENST00000613267 93 ntBASIC1.36□□□□□ -2.19
ZC3H4Q9UPT8 MIR193B-201ENST00000384907 83 ntBASIC1.35□□□□□ -2.19
ZC3H4Q9UPT8 SNORD110-201ENST00000408189 75 ntBASIC1.35□□□□□ -2.19
ZC3H4Q9UPT8 AC021146.9-201ENST00000512503 156 ntBASIC1.35□□□□□ -2.19
ZC3H4Q9UPT8 SNORA40.17-201ENST00000517256 115 ntBASIC1.35□□□□□ -2.19
ZC3H4Q9UPT8 Y_RNA.407-201ENST00000383986 113 ntBASIC1.34□□□□□ -2.2
ZC3H4Q9UPT8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
ZC3H4Q9UPT8 RNY1P8-201ENST00000383970 114 ntBASIC1.33□□□□□ -2.2
ZC3H4Q9UPT8 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.33□□□□□ -2.2
ZC3H4Q9UPT8 RNA5SP476-201ENST00000516613 103 ntBASIC1.33□□□□□ -2.2
ZC3H4Q9UPT8 RNU6-1162P-201ENST00000384443 104 ntBASIC1.32□□□□□ -2.2
ZC3H4Q9UPT8 RNU6-656P-201ENST00000516785 107 ntBASIC1.32□□□□□ -2.2
ZC3H4Q9UPT8 MIR1273G-201ENST00000577677 100 ntBASIC1.32□□□□□ -2.2
ZC3H4Q9UPT8 MIR4752-201ENST00000579672 72 ntBASIC1.32□□□□□ -2.2
ZC3H4Q9UPT8 AL353765.1-201ENST00000605514 183 ntBASIC1.32□□□□□ -2.2
ZC3H4Q9UPT8 MIR532-201ENST00000385025 91 ntBASIC1.31□□□□□ -2.2
ZC3H4Q9UPT8 RNU6-542P-201ENST00000516405 103 ntBASIC1.31□□□□□ -2.2
ZC3H4Q9UPT8 MIR548V-201ENST00000584165 80 ntBASIC1.31□□□□□ -2.2
ZC3H4Q9UPT8 AL590095.2-201ENST00000604136 117 ntBASIC1.31□□□□□ -2.2
ZC3H4Q9UPT8 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
ZC3H4Q9UPT8 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ZC3H4Q9UPT8 Y_RNA.375-201ENST00000365625 101 ntBASIC1.3□□□□□ -2.2
ZC3H4Q9UPT8 MIR652-201ENST00000385278 98 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 330.3 ms