Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 RNU6-698P-201ENST00000363523 107 ntBASIC2.12□□□□□ -2.07
PHF8Q9UPP1 RNU6-34P-201ENST00000364874 107 ntBASIC2.12□□□□□ -2.07
PHF8Q9UPP1 SNORD89-201ENST00000390981 114 ntBASIC2.12□□□□□ -2.07
PHF8Q9UPP1 RNU6-269P-201ENST00000391077 97 ntBASIC2.12□□□□□ -2.07
PHF8Q9UPP1 RNU5B-6P-201ENST00000516765 68 ntBASIC2.12□□□□□ -2.07
PHF8Q9UPP1 uc_338.10-201ENST00000621872 182 ntBASIC2.12□□□□□ -2.07
PHF8Q9UPP1 RNU6-716P-201ENST00000365621 103 ntBASIC2.11□□□□□ -2.07
PHF8Q9UPP1 SNORA31.24-201ENST00000517232 57 ntBASIC2.11□□□□□ -2.07
PHF8Q9UPP1 AC021146.9-201ENST00000512503 156 ntBASIC2.1□□□□□ -2.07
PHF8Q9UPP1 RNA5SP102-201ENST00000516865 106 ntBASIC2.1□□□□□ -2.07
PHF8Q9UPP1 RNU1-92P-201ENST00000517017 135 ntBASIC2.1□□□□□ -2.07
PHF8Q9UPP1 SCARNA16.5-201ENST00000517114 183 ntBASIC2.1□□□□□ -2.07
PHF8Q9UPP1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PHF8Q9UPP1 RNU7-174P-201ENST00000516248 59 ntBASIC2.09□□□□□ -2.07
PHF8Q9UPP1 MIR3678-201ENST00000578455 94 ntBASIC2.09□□□□□ -2.07
PHF8Q9UPP1 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.09□□□□□ -2.07
PHF8Q9UPP1 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.09□□□□□ -2.07
PHF8Q9UPP1 SNORA25-201ENST00000384384 134 ntBASIC2.08□□□□□ -2.08
PHF8Q9UPP1 RNU6-520P-201ENST00000384717 104 ntBASIC2.08□□□□□ -2.08
PHF8Q9UPP1 MIR758-201ENST00000390227 88 ntBASIC2.08□□□□□ -2.08
PHF8Q9UPP1 U2.7-201ENST00000619197 100 ntBASIC2.08□□□□□ -2.08
PHF8Q9UPP1 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.08□□□□□ -2.08
PHF8Q9UPP1 snoU13.13-201ENST00000458842 104 ntBASIC2.07□□□□□ -2.08
PHF8Q9UPP1 RNA5SP484-201ENST00000458857 111 ntBASIC2.06□□□□□ -2.08
PHF8Q9UPP1 Y_RNA.633-201ENST00000459107 95 ntBASIC2.06□□□□□ -2.08
PHF8Q9UPP1 MIR4452-201ENST00000583004 71 ntBASIC2.06□□□□□ -2.08
PHF8Q9UPP1 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
PHF8Q9UPP1 AL353770.2-201ENST00000620024 78 ntBASIC2.05□□□□□ -2.08
PHF8Q9UPP1 AL162376.1-201ENST00000624117 175 ntBASIC2.05□□□□□ -2.08
PHF8Q9UPP1 MIR573-201ENST00000384964 99 ntBASIC2.04□□□□□ -2.08
PHF8Q9UPP1 AL354695.1-201ENST00000427935 228 ntBASIC2.04□□□□□ -2.08
PHF8Q9UPP1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC2.03□□□□□ -2.08
PHF8Q9UPP1 SCARNA17.3-201ENST00000516381 125 ntBASIC2.03□□□□□ -2.08
PHF8Q9UPP1 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC2.03□□□□□ -2.08
PHF8Q9UPP1 SNORA63.6-201ENST00000364921 119 ntBASIC2.02□□□□□ -2.09
PHF8Q9UPP1 Y_RNA.407-201ENST00000383986 113 ntBASIC2.02□□□□□ -2.09
PHF8Q9UPP1 MIR3612-201ENST00000579753 87 ntBASIC2.02□□□□□ -2.09
PHF8Q9UPP1 MIR6828-201ENST00000636181 60 ntBASIC2.02□□□□□ -2.09
PHF8Q9UPP1 Y_RNA.125-201ENST00000363371 111 ntBASIC2.01□□□□□ -2.09
PHF8Q9UPP1 SNORA33.1-201ENST00000364957 130 ntBASIC2□□□□□ -2.09
PHF8Q9UPP1 SNORD114-22-201ENST00000365423 72 ntBASIC2□□□□□ -2.09
PHF8Q9UPP1 MIR3122-201ENST00000577243 73 ntBASIC2□□□□□ -2.09
PHF8Q9UPP1 U4.4-201ENST00000620626 117 ntBASIC2□□□□□ -2.09
PHF8Q9UPP1 MIR19B1-201ENST00000384829 87 ntBASIC1.99□□□□□ -2.09
PHF8Q9UPP1 MIR200A-201ENST00000384875 90 ntBASIC1.99□□□□□ -2.09
PHF8Q9UPP1 AC025627.3-201ENST00000582078 182 ntBASIC1.99□□□□□ -2.09
PHF8Q9UPP1 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.99□□□□□ -2.09
PHF8Q9UPP1 MIR1304-201ENST00000408243 91 ntBASIC1.98□□□□□ -2.09
PHF8Q9UPP1 RNU6-1312P-201ENST00000362425 108 ntBASIC1.97□□□□□ -2.09
PHF8Q9UPP1 RNA5SP327-201ENST00000362494 101 ntBASIC1.97□□□□□ -2.09
PHF8Q9UPP1 Y_RNA.540-201ENST00000384638 111 ntBASIC1.97□□□□□ -2.09
PHF8Q9UPP1 MIR96-201ENST00000362288 78 ntBASIC1.96□□□□□ -2.1
PHF8Q9UPP1 MIR652-201ENST00000385278 98 ntBASIC1.96□□□□□ -2.1
PHF8Q9UPP1 RNU7-119P-201ENST00000459279 63 ntBASIC1.96□□□□□ -2.1
PHF8Q9UPP1 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.96□□□□□ -2.1
PHF8Q9UPP1 MIR4285-201ENST00000581001 85 ntBASIC1.96□□□□□ -2.1
PHF8Q9UPP1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.96□□□□□ -2.1
PHF8Q9UPP1 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.95□□□□□ -2.1
PHF8Q9UPP1 RNA5SP227-201ENST00000516184 113 ntBASIC1.95□□□□□ -2.1
PHF8Q9UPP1 Y_RNA.379-201ENST00000365653 102 ntBASIC1.94□□□□□ -2.1
PHF8Q9UPP1 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.94□□□□□ -2.1
PHF8Q9UPP1 MIR6078-201ENST00000611069 100 ntBASIC1.94□□□□□ -2.1
PHF8Q9UPP1 Y_RNA.246-201ENST00000364495 108 ntBASIC1.93□□□□□ -2.1
PHF8Q9UPP1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
PHF8Q9UPP1 RNU6-42P-201ENST00000384165 107 ntBASIC1.92□□□□□ -2.1
PHF8Q9UPP1 AC006210.1-201ENST00000424882 111 ntBASIC1.92□□□□□ -2.1
PHF8Q9UPP1 RNU4-45P-201ENST00000365469 141 ntBASIC1.91□□□□□ -2.1
PHF8Q9UPP1 SNORD110-201ENST00000408189 75 ntBASIC1.9□□□□□ -2.11
PHF8Q9UPP1 MIR548E-201ENST00000408287 88 ntBASIC1.9□□□□□ -2.11
PHF8Q9UPP1 RNA5SP220-201ENST00000516298 104 ntBASIC1.9□□□□□ -2.11
PHF8Q9UPP1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.89□□□□□ -2.11
PHF8Q9UPP1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
PHF8Q9UPP1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.89□□□□□ -2.11
PHF8Q9UPP1 MIR3660-201ENST00000584845 100 ntBASIC1.88□□□□□ -2.11
PHF8Q9UPP1 RNU1-93P-201ENST00000364704 169 ntBASIC1.87□□□□□ -2.11
PHF8Q9UPP1 SNORA25.8-201ENST00000364831 128 ntBASIC1.87□□□□□ -2.11
PHF8Q9UPP1 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
PHF8Q9UPP1 MIR548AE1-201ENST00000583292 70 ntBASIC1.87□□□□□ -2.11
PHF8Q9UPP1 MIR4473-201ENST00000583731 91 ntBASIC1.87□□□□□ -2.11
PHF8Q9UPP1 MIR6734-201ENST00000621166 68 ntBASIC1.87□□□□□ -2.11
PHF8Q9UPP1 MIR582-201ENST00000365731 98 ntBASIC1.86□□□□□ -2.11
PHF8Q9UPP1 RNU4-88P-201ENST00000411220 86 ntBASIC1.86□□□□□ -2.11
PHF8Q9UPP1 AL021921.1-201ENST00000442774 93 ntBASIC1.86□□□□□ -2.11
PHF8Q9UPP1 SNORD124-201ENST00000459577 104 ntBASIC1.86□□□□□ -2.11
PHF8Q9UPP1 RNA5SP268-201ENST00000516828 124 ntBASIC1.86□□□□□ -2.11
PHF8Q9UPP1 RNU6-997P-201ENST00000384725 107 ntBASIC1.85□□□□□ -2.11
PHF8Q9UPP1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.85□□□□□ -2.11
PHF8Q9UPP1 CYP3A54P-201ENST00000566950 75 ntBASIC1.85□□□□□ -2.11
PHF8Q9UPP1 MIR548AD-201ENST00000584780 82 ntBASIC1.85□□□□□ -2.11
PHF8Q9UPP1 U6.96-201ENST00000636425 70 ntBASIC1.85□□□□□ -2.11
PHF8Q9UPP1 MIR18A-201ENST00000362310 71 ntBASIC1.84□□□□□ -2.11
PHF8Q9UPP1 Y_RNA.325-201ENST00000365171 122 ntBASIC1.84□□□□□ -2.11
PHF8Q9UPP1 SNORA41B-201ENST00000384785 128 ntBASIC1.84□□□□□ -2.11
PHF8Q9UPP1 MIR320A-201ENST00000385302 82 ntBASIC1.84□□□□□ -2.11
PHF8Q9UPP1 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
PHF8Q9UPP1 SNORA36.1-201ENST00000363424 132 ntBASIC1.83□□□□□ -2.12
PHF8Q9UPP1 SNORD114-24-201ENST00000365029 72 ntBASIC1.83□□□□□ -2.12
PHF8Q9UPP1 AC022709.1-201ENST00000615967 87 ntBASIC1.83□□□□□ -2.12
PHF8Q9UPP1 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
PHF8Q9UPP1 RNU6-231P-201ENST00000517122 103 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 285 ms