Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
DKK3Q9UBP4 MIR3202-2-201ENST00000635980 79 ntBASIC0.57□□□□□ -2.32
DKK3Q9UBP4 RNU6-573P-201ENST00000383938 106 ntBASIC0.56□□□□□ -2.32
DKK3Q9UBP4 RNU6-787P-201ENST00000384032 107 ntBASIC0.56□□□□□ -2.32
DKK3Q9UBP4 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
DKK3Q9UBP4 RNU6-129P-201ENST00000391022 107 ntBASIC0.56□□□□□ -2.32
DKK3Q9UBP4 RNA5SP63-201ENST00000391225 112 ntBASIC0.56□□□□□ -2.32
DKK3Q9UBP4 RNU2-59P-201ENST00000410482 191 ntBASIC0.56□□□□□ -2.32
DKK3Q9UBP4 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
DKK3Q9UBP4 Y_RNA.316-201ENST00000365118 111 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 SNORD77.2-201ENST00000391045 68 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 RNU6-1052P-201ENST00000411398 104 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 AC069271.1-201ENST00000445577 156 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 snoU13.17-201ENST00000458802 104 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 RNA5SP484-201ENST00000458857 111 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 RNU6-719P-201ENST00000516671 104 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 MIR4460-201ENST00000577862 86 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 AC069503.3-201ENST00000618674 145 ntBASIC0.55□□□□□ -2.32
DKK3Q9UBP4 RNU6-208P-201ENST00000362431 107 ntBASIC0.54□□□□□ -2.32
DKK3Q9UBP4 RNU6-315P-201ENST00000362666 107 ntBASIC0.54□□□□□ -2.32
DKK3Q9UBP4 RNA5SP499-201ENST00000363982 119 ntBASIC0.54□□□□□ -2.32
DKK3Q9UBP4 AC097510.1-201ENST00000510945 133 ntBASIC0.54□□□□□ -2.32
DKK3Q9UBP4 RNU1-29P-201ENST00000606574 126 ntBASIC0.54□□□□□ -2.32
DKK3Q9UBP4 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.53□□□□□ -2.32
DKK3Q9UBP4 VTRNA1-3-201ENST00000365645 89 ntBASIC0.53□□□□□ -2.32
DKK3Q9UBP4 Y_RNA.437-201ENST00000384113 113 ntBASIC0.53□□□□□ -2.32
DKK3Q9UBP4 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
DKK3Q9UBP4 AL450471.1-201ENST00000447509 127 ntBASIC0.53□□□□□ -2.32
DKK3Q9UBP4 MIR1245B-201ENST00000636115 69 ntBASIC0.53□□□□□ -2.32
DKK3Q9UBP4 RNU6-686P-201ENST00000364839 107 ntBASIC0.52□□□□□ -2.33
DKK3Q9UBP4 RNU6-1177P-201ENST00000391058 104 ntBASIC0.52□□□□□ -2.33
DKK3Q9UBP4 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.52□□□□□ -2.33
DKK3Q9UBP4 NAMPTP3-201ENST00000569273 224 ntBASIC0.52□□□□□ -2.33
DKK3Q9UBP4 MIRLET7A1-201ENST00000362295 80 ntBASIC0.51□□□□□ -2.33
DKK3Q9UBP4 RNU6-478P-201ENST00000363904 110 ntBASIC0.51□□□□□ -2.33
DKK3Q9UBP4 RNU6-652P-201ENST00000365488 107 ntBASIC0.51□□□□□ -2.33
DKK3Q9UBP4 SNORD110-201ENST00000408189 75 ntBASIC0.51□□□□□ -2.33
DKK3Q9UBP4 Y_RNA.606-201ENST00000410579 103 ntBASIC0.51□□□□□ -2.33
DKK3Q9UBP4 RNU7-24P-201ENST00000458867 62 ntBASIC0.51□□□□□ -2.33
DKK3Q9UBP4 MIR4514-201ENST00000581410 57 ntBASIC0.51□□□□□ -2.33
DKK3Q9UBP4 RNU6-161P-201ENST00000363051 106 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 SNORD44.1-201ENST00000363202 61 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 SNORD78.1-201ENST00000390866 65 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 AC006210.1-201ENST00000424882 111 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 MIR4752-201ENST00000579672 72 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 YWHAEP2-201ENST00000580066 112 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 YWHAEP3-201ENST00000582767 121 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 AC023932.2-201ENST00000603176 175 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 SNORA70.25-201ENST00000612741 95 ntBASIC0.5□□□□□ -2.33
DKK3Q9UBP4 RNU6-495P-201ENST00000362995 107 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 Y_RNA.313-201ENST00000365095 103 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 SNORA2A-201ENST00000383885 135 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 RNU6V-201ENST00000384105 107 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 SNORA50A-201ENST00000384225 134 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 RNU6-1108P-201ENST00000516308 104 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 U6.81-201ENST00000612550 106 ntBASIC0.49□□□□□ -2.33
DKK3Q9UBP4 RNU6-1124P-201ENST00000384169 107 ntBASIC0.48□□□□□ -2.33
DKK3Q9UBP4 MIR329-2-201ENST00000385029 84 ntBASIC0.48□□□□□ -2.33
DKK3Q9UBP4 Y_RNA.685-201ENST00000516532 108 ntBASIC0.48□□□□□ -2.33
DKK3Q9UBP4 MIR4712-201ENST00000583750 82 ntBASIC0.48□□□□□ -2.33
DKK3Q9UBP4 U7.6-201ENST00000610841 64 ntBASIC0.48□□□□□ -2.33
DKK3Q9UBP4 MIR6755-201ENST00000619993 66 ntBASIC0.48□□□□□ -2.33
DKK3Q9UBP4 RNU6-228P-201ENST00000362700 106 ntBASIC0.47□□□□□ -2.33
DKK3Q9UBP4 Y_RNA.94-201ENST00000363068 106 ntBASIC0.47□□□□□ -2.33
DKK3Q9UBP4 RNU6-824P-201ENST00000363724 104 ntBASIC0.47□□□□□ -2.33
DKK3Q9UBP4 RNU6-380P-201ENST00000410207 107 ntBASIC0.47□□□□□ -2.33
DKK3Q9UBP4 AC114737.2-201ENST00000421583 173 ntBASIC0.47□□□□□ -2.33
DKK3Q9UBP4 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.47□□□□□ -2.33
DKK3Q9UBP4 Y_RNA.12-201ENST00000362393 112 ntBASIC0.46□□□□□ -2.34
DKK3Q9UBP4 RNU6-340P-201ENST00000364005 107 ntBASIC0.46□□□□□ -2.34
DKK3Q9UBP4 RNU6-681P-201ENST00000364012 104 ntBASIC0.46□□□□□ -2.34
DKK3Q9UBP4 RNU6-54P-201ENST00000365563 107 ntBASIC0.46□□□□□ -2.34
DKK3Q9UBP4 SNORD75.2-201ENST00000408784 58 ntBASIC0.46□□□□□ -2.34
DKK3Q9UBP4 SNORA68.3-201ENST00000515906 83 ntBASIC0.46□□□□□ -2.34
DKK3Q9UBP4 MIRLET7D-201ENST00000362263 87 ntBASIC0.45□□□□□ -2.34
DKK3Q9UBP4 Y_RNA.423-201ENST00000384057 113 ntBASIC0.45□□□□□ -2.34
DKK3Q9UBP4 HMGN2P22-201ENST00000427588 175 ntBASIC0.45□□□□□ -2.34
DKK3Q9UBP4 RNU5B-6P-201ENST00000516765 68 ntBASIC0.45□□□□□ -2.34
DKK3Q9UBP4 RNU6-303P-201ENST00000517091 106 ntBASIC0.45□□□□□ -2.34
DKK3Q9UBP4 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.45□□□□□ -2.34
DKK3Q9UBP4 MIR4636-201ENST00000582271 80 ntBASIC0.45□□□□□ -2.34
DKK3Q9UBP4 MIR6759-201ENST00000638110 65 ntBASIC0.45□□□□□ -2.34
DKK3Q9UBP4 RNU6-1094P-201ENST00000362416 104 ntBASIC0.44□□□□□ -2.34
DKK3Q9UBP4 Y_RNA.125-201ENST00000363371 111 ntBASIC0.44□□□□□ -2.34
DKK3Q9UBP4 SNORD114-4-201ENST00000363962 75 ntBASIC0.44□□□□□ -2.34
DKK3Q9UBP4 RNU6-279P-201ENST00000391297 101 ntBASIC0.44□□□□□ -2.34
DKK3Q9UBP4 MIR1255A-201ENST00000408338 113 ntBASIC0.44□□□□□ -2.34
DKK3Q9UBP4 MIR1297-201ENST00000637311 77 ntBASIC0.44□□□□□ -2.34
DKK3Q9UBP4 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.44□□□□□ -2.34
DKK3Q9UBP4 AC090625.1-201ENST00000357130 210 ntBASIC0.43□□□□□ -2.34
DKK3Q9UBP4 RNU6-382P-201ENST00000365181 106 ntBASIC0.43□□□□□ -2.34
DKK3Q9UBP4 Y_RNA.407-201ENST00000383986 113 ntBASIC0.43□□□□□ -2.34
DKK3Q9UBP4 AC074348.1-201ENST00000426503 132 ntBASIC0.43□□□□□ -2.34
DKK3Q9UBP4 Y_RNA.371-201ENST00000365591 113 ntBASIC0.42□□□□□ -2.34
DKK3Q9UBP4 snoU13.19-201ENST00000459148 104 ntBASIC0.42□□□□□ -2.34
DKK3Q9UBP4 RNU6-752P-201ENST00000516376 102 ntBASIC0.42□□□□□ -2.34
DKK3Q9UBP4 RNA5SP128-201ENST00000365305 116 ntBASIC0.41□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 207 ms