Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RNU6-990P-201ENST00000364385 104 ntBASIC1.41□□□□□ -2.18
EFCC1Q9HA90 RNU6-260P-201ENST00000384092 107 ntBASIC1.41□□□□□ -2.18
EFCC1Q9HA90 MIR758-201ENST00000390227 88 ntBASIC1.41□□□□□ -2.18
EFCC1Q9HA90 AC087343.1-201ENST00000477341 475 ntBASIC1.41□□□□□ -2.18
EFCC1Q9HA90 MIR4295-201ENST00000585286 85 ntBASIC1.41□□□□□ -2.18
EFCC1Q9HA90 RNU6-726P-201ENST00000364680 107 ntBASIC1.4□□□□□ -2.19
EFCC1Q9HA90 MIR19B1-201ENST00000384829 87 ntBASIC1.4□□□□□ -2.19
EFCC1Q9HA90 MIR573-201ENST00000384964 99 ntBASIC1.4□□□□□ -2.19
EFCC1Q9HA90 MTND4LP1-201ENST00000446263 157 ntBASIC1.4□□□□□ -2.19
EFCC1Q9HA90 RNA5SP47-201ENST00000517230 109 ntBASIC1.4□□□□□ -2.19
EFCC1Q9HA90 AC011195.1-201ENST00000578177 177 ntBASIC1.4□□□□□ -2.19
EFCC1Q9HA90 SNORD41.1-201ENST00000391000 69 ntBASIC1.39□□□□□ -2.19
EFCC1Q9HA90 RNU6-269P-201ENST00000391077 97 ntBASIC1.39□□□□□ -2.19
EFCC1Q9HA90 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
EFCC1Q9HA90 Y_RNA.30-201ENST00000362572 97 ntBASIC1.38□□□□□ -2.19
EFCC1Q9HA90 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.38□□□□□ -2.19
EFCC1Q9HA90 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
EFCC1Q9HA90 RNU1-141P-201ENST00000364623 158 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 RNU6-1187P-201ENST00000364771 110 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 MIR216A-201ENST00000385063 110 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 MIR618-201ENST00000385287 98 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 MT-TY-201ENST00000387409 66 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 SNORD99-201ENST00000408612 74 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 snoU13.13-201ENST00000458842 104 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 RNA5SP484-201ENST00000458857 111 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 MIR5000-201ENST00000577717 103 ntBASIC1.37□□□□□ -2.19
EFCC1Q9HA90 RNU1-124P-201ENST00000363861 145 ntBASIC1.36□□□□□ -2.19
EFCC1Q9HA90 RNU6-645P-201ENST00000364649 106 ntBASIC1.36□□□□□ -2.19
EFCC1Q9HA90 RNA5SP227-201ENST00000516184 113 ntBASIC1.36□□□□□ -2.19
EFCC1Q9HA90 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.35□□□□□ -2.19
EFCC1Q9HA90 MIR200A-201ENST00000384875 90 ntBASIC1.35□□□□□ -2.19
EFCC1Q9HA90 RNA5SP404-201ENST00000517118 132 ntBASIC1.35□□□□□ -2.19
EFCC1Q9HA90 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.35□□□□□ -2.19
EFCC1Q9HA90 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.35□□□□□ -2.19
EFCC1Q9HA90 MIR548C-201ENST00000384815 97 ntBASIC1.34□□□□□ -2.19
EFCC1Q9HA90 SCARNA16.5-201ENST00000517114 183 ntBASIC1.34□□□□□ -2.19
EFCC1Q9HA90 AC018659.1-201ENST00000551083 169 ntBASIC1.34□□□□□ -2.19
EFCC1Q9HA90 AC025627.3-201ENST00000582078 182 ntBASIC1.34□□□□□ -2.19
EFCC1Q9HA90 AC073869.9-201ENST00000641610 120 ntBASIC1.34□□□□□ -2.19
EFCC1Q9HA90 MIR4511-201ENST00000582784 87 ntBASIC1.33□□□□□ -2.2
EFCC1Q9HA90 AC069503.3-201ENST00000618674 145 ntBASIC1.33□□□□□ -2.2
EFCC1Q9HA90 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.33□□□□□ -2.2
EFCC1Q9HA90 SNORD114-24-201ENST00000365029 72 ntBASIC1.32□□□□□ -2.2
EFCC1Q9HA90 RNA5SP222-201ENST00000411039 105 ntBASIC1.32□□□□□ -2.2
EFCC1Q9HA90 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
EFCC1Q9HA90 MIR18A-201ENST00000362310 71 ntBASIC1.31□□□□□ -2.2
EFCC1Q9HA90 MIR1285-1-201ENST00000408593 84 ntBASIC1.31□□□□□ -2.2
EFCC1Q9HA90 MIR4473-201ENST00000583731 91 ntBASIC1.31□□□□□ -2.2
EFCC1Q9HA90 AC103706.3-201ENST00000636297 85 ntBASIC1.31□□□□□ -2.2
EFCC1Q9HA90 Y_RNA.178-201ENST00000363832 102 ntBASIC1.3□□□□□ -2.2
EFCC1Q9HA90 MTND4LP19-201ENST00000403051 166 ntBASIC1.3□□□□□ -2.2
EFCC1Q9HA90 AC211469.2-201ENST00000605461 205 ntBASIC1.3□□□□□ -2.2
EFCC1Q9HA90 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.3□□□□□ -2.2
EFCC1Q9HA90 SNORA2.1-201ENST00000363089 137 ntBASIC1.29□□□□□ -2.2
EFCC1Q9HA90 SNORA8.2-201ENST00000384372 139 ntBASIC1.29□□□□□ -2.2
EFCC1Q9HA90 RNA5SP255-201ENST00000516370 107 ntBASIC1.29□□□□□ -2.2
EFCC1Q9HA90 MIR548V-201ENST00000584165 80 ntBASIC1.29□□□□□ -2.2
EFCC1Q9HA90 MIR373-201ENST00000362273 69 ntBASIC1.28□□□□□ -2.2
EFCC1Q9HA90 OR2A41P-201ENST00000473586 105 ntBASIC1.28□□□□□ -2.2
EFCC1Q9HA90 SNORA40.17-201ENST00000517256 115 ntBASIC1.28□□□□□ -2.2
EFCC1Q9HA90 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
EFCC1Q9HA90 AC006210.1-201ENST00000424882 111 ntBASIC1.27□□□□□ -2.21
EFCC1Q9HA90 RNA5SP268-201ENST00000516828 124 ntBASIC1.27□□□□□ -2.21
EFCC1Q9HA90 CYP3A137P-201ENST00000562436 69 ntBASIC1.27□□□□□ -2.21
EFCC1Q9HA90 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.27□□□□□ -2.21
EFCC1Q9HA90 SNORA36.1-201ENST00000363424 132 ntBASIC1.26□□□□□ -2.21
EFCC1Q9HA90 SNORD114-4-201ENST00000363962 75 ntBASIC1.26□□□□□ -2.21
EFCC1Q9HA90 RNU6-656P-201ENST00000516785 107 ntBASIC1.26□□□□□ -2.21
EFCC1Q9HA90 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
EFCC1Q9HA90 MIR4752-201ENST00000579672 72 ntBASIC1.25□□□□□ -2.21
EFCC1Q9HA90 SNORA36.2-201ENST00000384004 127 ntBASIC1.24□□□□□ -2.21
EFCC1Q9HA90 MIR633-201ENST00000384821 98 ntBASIC1.24□□□□□ -2.21
EFCC1Q9HA90 RNA5SP299-201ENST00000391203 116 ntBASIC1.24□□□□□ -2.21
EFCC1Q9HA90 SNORD110-201ENST00000408189 75 ntBASIC1.24□□□□□ -2.21
EFCC1Q9HA90 RNU6-542P-201ENST00000516405 103 ntBASIC1.24□□□□□ -2.21
EFCC1Q9HA90 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.24□□□□□ -2.21
EFCC1Q9HA90 AC103810.9-201ENST00000606688 112 ntBASIC1.24□□□□□ -2.21
EFCC1Q9HA90 AC092634.7-201ENST00000621022 103 ntBASIC1.24□□□□□ -2.21
EFCC1Q9HA90 RNU6-499P-201ENST00000365615 107 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 RNY1P8-201ENST00000383970 114 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 MIR193B-201ENST00000384907 83 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 MIR652-201ENST00000385278 98 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
EFCC1Q9HA90 AC110620.1-201ENST00000416042 228 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 AC021146.9-201ENST00000512503 156 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 RNA5SP94-201ENST00000516917 108 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 AL162376.1-201ENST00000624117 175 ntBASIC1.23□□□□□ -2.21
EFCC1Q9HA90 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.23□□□□□ -2.21
EFCC1Q9HA90 RNU6-1162P-201ENST00000384443 104 ntBASIC1.22□□□□□ -2.21
EFCC1Q9HA90 MIR548AE1-201ENST00000583292 70 ntBASIC1.22□□□□□ -2.21
EFCC1Q9HA90 SNORD114-21-201ENST00000606412 72 ntBASIC1.22□□□□□ -2.21
EFCC1Q9HA90 MIR7107-201ENST00000611489 80 ntBASIC1.22□□□□□ -2.21
EFCC1Q9HA90 Y_RNA.375-201ENST00000365625 101 ntBASIC1.21□□□□□ -2.22
EFCC1Q9HA90 RNU6-1089P-201ENST00000516473 104 ntBASIC1.21□□□□□ -2.22
EFCC1Q9HA90 MIR1273G-201ENST00000577677 100 ntBASIC1.21□□□□□ -2.22
EFCC1Q9HA90 MIR6828-201ENST00000636181 60 ntBASIC1.21□□□□□ -2.22
EFCC1Q9HA90 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
EFCC1Q9HA90 RNA5SP192-201ENST00000364404 120 ntBASIC1.2□□□□□ -2.22
EFCC1Q9HA90 Y_RNA.407-201ENST00000383986 113 ntBASIC1.2□□□□□ -2.22
EFCC1Q9HA90 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 184.7 ms