Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 SNORA70.25-201ENST00000612741 95 ntBASIC0.86□□□□□ -2.27
KRTAP3-1Q9BYR8 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP3-1Q9BYR8 SNORA41B-201ENST00000384785 128 ntBASIC0.85□□□□□ -2.27
KRTAP3-1Q9BYR8 RNU6-548P-201ENST00000517083 115 ntBASIC0.85□□□□□ -2.27
KRTAP3-1Q9BYR8 RNU6-231P-201ENST00000517122 103 ntBASIC0.85□□□□□ -2.27
KRTAP3-1Q9BYR8 AC243829.6-201ENST00000612652 106 ntBASIC0.85□□□□□ -2.27
KRTAP3-1Q9BYR8 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP3-1Q9BYR8 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC0.85□□□□□ -2.27
KRTAP3-1Q9BYR8 MIR26B-201ENST00000362251 77 ntBASIC0.84□□□□□ -2.27
KRTAP3-1Q9BYR8 TP73-AS1.1-201ENST00000611447 161 ntBASIC0.84□□□□□ -2.27
KRTAP3-1Q9BYR8 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 SNORD116-16-201ENST00000384533 92 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 RNU6-1246P-201ENST00000391064 107 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 HMGN2P22-201ENST00000427588 175 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 AL591806.2-201ENST00000433122 173 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 RNA5SP182-201ENST00000516064 82 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR4752-201ENST00000579672 72 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 U7.6-201ENST00000610841 64 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 AC243829.3-201ENST00000622177 108 ntBASIC0.83□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR449A-201ENST00000362113 91 ntBASIC0.82□□□□□ -2.28
KRTAP3-1Q9BYR8 Y_RNA.74-201ENST00000362911 99 ntBASIC0.82□□□□□ -2.28
KRTAP3-1Q9BYR8 SNORD114-29-201ENST00000364819 70 ntBASIC0.82□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR527-201ENST00000385244 85 ntBASIC0.82□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR320A-201ENST00000385302 82 ntBASIC0.82□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR548AD-201ENST00000584780 82 ntBASIC0.82□□□□□ -2.28
KRTAP3-1Q9BYR8 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
KRTAP3-1Q9BYR8 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 SNORA36.2-201ENST00000384004 127 ntBASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 Y_RNA.500-201ENST00000384466 111 ntBASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR1255B2-201ENST00000408618 67 ntBASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 RNU4-88P-201ENST00000411220 86 ntBASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 AL353765.1-201ENST00000605514 183 ntBASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR8081-201ENST00000611533 95 ntBASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 AC084768.2-201ENST00000622736 221 ntBASIC0.81□□□□□ -2.28
KRTAP3-1Q9BYR8 SNORD116.2-201ENST00000391251 93 ntBASIC0.8□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR4648-201ENST00000580107 72 ntBASIC0.8□□□□□ -2.28
KRTAP3-1Q9BYR8 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.8□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR7110-201ENST00000612638 86 ntBASIC0.8□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR429-201ENST00000362106 83 ntBASIC0.79□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR4255-201ENST00000579351 72 ntBASIC0.79□□□□□ -2.28
KRTAP3-1Q9BYR8 AC090617.8-201ENST00000623339 167 ntBASIC0.79□□□□□ -2.28
KRTAP3-1Q9BYR8 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 RNU6-753P-201ENST00000363926 107 ntBASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 RNA5SP517-201ENST00000364724 117 ntBASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 RNU7-154P-201ENST00000516194 62 ntBASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 RNA5SP61-201ENST00000516453 100 ntBASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
KRTAP3-1Q9BYR8 Y_RNA.282-201ENST00000364793 102 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORA2A-201ENST00000383885 135 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU6-246P-201ENST00000384702 107 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR519A2-201ENST00000384990 87 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR1304-201ENST00000408243 91 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORD71-201ENST00000411292 86 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 RNA5SP470-201ENST00000516463 106 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR4661-201ENST00000582720 75 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU1-29P-201ENST00000606574 126 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORA25.18-201ENST00000607153 114 ntBASIC0.77□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU1-42P-201ENST00000364033 160 ntBASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 RNY1P8-201ENST00000383970 114 ntBASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR1323-201ENST00000408090 73 ntBASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 AC069271.1-201ENST00000445577 156 ntBASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR6773-201ENST00000612812 74 ntBASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC0.76□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORD115-25-201ENST00000362619 82 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORD114-1-201ENST00000362705 72 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR583-201ENST00000384846 75 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR504-201ENST00000385065 83 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 RNA5SP508-201ENST00000411327 119 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU6-229P-201ENST00000516614 102 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU7-188P-201ENST00000517063 64 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORA40.16-201ENST00000517238 121 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR6845-201ENST00000613182 61 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR7974-201ENST00000615835 79 ntBASIC0.75□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU6-997P-201ENST00000384725 107 ntBASIC0.74□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORA40B-201ENST00000385573 128 ntBASIC0.74□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORA40.8-201ENST00000411034 126 ntBASIC0.74□□□□□ -2.29
KRTAP3-1Q9BYR8 ACA64.5-201ENST00000516207 127 ntBASIC0.74□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU6-980P-201ENST00000516925 103 ntBASIC0.74□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR502-201ENST00000606349 86 ntBASIC0.74□□□□□ -2.29
KRTAP3-1Q9BYR8 MIR6852-201ENST00000621699 66 ntBASIC0.74□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORD118-201ENST00000363593 134 ntBASIC0.73□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU6-337P-201ENST00000391243 106 ntBASIC0.73□□□□□ -2.29
KRTAP3-1Q9BYR8 AC068338.1-201ENST00000565567 176 ntBASIC0.73□□□□□ -2.29
KRTAP3-1Q9BYR8 BX248123.2-201ENST00000606318 124 ntBASIC0.73□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU4-33P-201ENST00000364316 85 ntBASIC0.72□□□□□ -2.29
KRTAP3-1Q9BYR8 Y_RNA.423-201ENST00000384057 113 ntBASIC0.72□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU6-939P-201ENST00000384634 107 ntBASIC0.72□□□□□ -2.29
KRTAP3-1Q9BYR8 MIRLET7B-201ENST00000385140 83 ntBASIC0.72□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORA49-201ENST00000386157 136 ntBASIC0.72□□□□□ -2.29
KRTAP3-1Q9BYR8 RNU6-172P-201ENST00000411000 93 ntBASIC0.72□□□□□ -2.29
KRTAP3-1Q9BYR8 AL354695.1-201ENST00000427935 228 ntBASIC0.72□□□□□ -2.29
KRTAP3-1Q9BYR8 SNORD1B-201ENST00000363091 84 ntBASIC0.71□□□□□ -2.3
KRTAP3-1Q9BYR8 RNU6-810P-201ENST00000364001 107 ntBASIC0.7□□□□□ -2.3
KRTAP3-1Q9BYR8 UBE2DNL-203ENST00000474922 222 ntBASIC0.7□□□□□ -2.3
KRTAP3-1Q9BYR8 RNU6-848P-201ENST00000515948 107 ntBASIC0.7□□□□□ -2.3
KRTAP3-1Q9BYR8 RNU6-617P-201ENST00000516147 107 ntBASIC0.7□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms