Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 MIR6509-201ENST00000614603 85 ntBASIC0.82□□□□□ -2.28
CALR3Q96L12 MIR6866-201ENST00000638146 69 ntBASIC0.82□□□□□ -2.28
CALR3Q96L12 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.82□□□□□ -2.28
CALR3Q96L12 SNORD44.1-201ENST00000363202 61 ntBASIC0.81□□□□□ -2.28
CALR3Q96L12 TRMT112P2-201ENST00000512910 132 ntBASIC0.81□□□□□ -2.28
CALR3Q96L12 RNU6-70P-201ENST00000516438 60 ntBASIC0.81□□□□□ -2.28
CALR3Q96L12 uc_338.10-201ENST00000621872 182 ntBASIC0.81□□□□□ -2.28
CALR3Q96L12 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
CALR3Q96L12 Y_RNA.125-201ENST00000363371 111 ntBASIC0.8□□□□□ -2.28
CALR3Q96L12 MIR3134-201ENST00000579433 74 ntBASIC0.8□□□□□ -2.28
CALR3Q96L12 MIR3124-201ENST00000582636 67 ntBASIC0.8□□□□□ -2.28
CALR3Q96L12 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
CALR3Q96L12 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.79□□□□□ -2.28
CALR3Q96L12 MIR889-201ENST00000401280 79 ntBASIC0.79□□□□□ -2.28
CALR3Q96L12 AL603825.1-201ENST00000438481 80 ntBASIC0.79□□□□□ -2.28
CALR3Q96L12 RNU6-1053P-201ENST00000515930 101 ntBASIC0.79□□□□□ -2.28
CALR3Q96L12 MIR548AE1-201ENST00000583292 70 ntBASIC0.79□□□□□ -2.28
CALR3Q96L12 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.78□□□□□ -2.28
CALR3Q96L12 MIR337-201ENST00000362281 93 ntBASIC0.77□□□□□ -2.29
CALR3Q96L12 RNU6-1296P-201ENST00000383879 107 ntBASIC0.77□□□□□ -2.29
CALR3Q96L12 RNU6-411P-201ENST00000384451 107 ntBASIC0.77□□□□□ -2.29
CALR3Q96L12 MIR652-201ENST00000385278 98 ntBASIC0.77□□□□□ -2.29
CALR3Q96L12 RNU6-321P-201ENST00000410912 106 ntBASIC0.77□□□□□ -2.29
CALR3Q96L12 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.77□□□□□ -2.29
CALR3Q96L12 SNORA68.3-201ENST00000515906 83 ntBASIC0.77□□□□□ -2.29
CALR3Q96L12 RNU6-260P-201ENST00000384092 107 ntBASIC0.76□□□□□ -2.29
CALR3Q96L12 MIR760-201ENST00000390220 80 ntBASIC0.76□□□□□ -2.29
CALR3Q96L12 SCARNA17.3-201ENST00000516381 125 ntBASIC0.76□□□□□ -2.29
CALR3Q96L12 MIR4698-201ENST00000577795 80 ntBASIC0.76□□□□□ -2.29
CALR3Q96L12 RNU6-1232P-201ENST00000516299 86 ntBASIC0.75□□□□□ -2.29
CALR3Q96L12 MIR3973-201ENST00000579824 107 ntBASIC0.75□□□□□ -2.29
CALR3Q96L12 MIR664A-201ENST00000626086 82 ntBASIC0.75□□□□□ -2.29
CALR3Q96L12 MIR203A-201ENST00000384836 110 ntBASIC0.74□□□□□ -2.29
CALR3Q96L12 MIR520E-201ENST00000384867 87 ntBASIC0.74□□□□□ -2.29
CALR3Q96L12 RNA5SP128-201ENST00000365305 116 ntBASIC0.73□□□□□ -2.29
CALR3Q96L12 Y_RNA.545-201ENST00000384652 105 ntBASIC0.73□□□□□ -2.29
CALR3Q96L12 MIR3657-201ENST00000584818 117 ntBASIC0.73□□□□□ -2.29
CALR3Q96L12 MIRLET7D-201ENST00000362263 87 ntBASIC0.72□□□□□ -2.29
CALR3Q96L12 MIR7-2-201ENST00000384970 110 ntBASIC0.72□□□□□ -2.29
CALR3Q96L12 MIR373-201ENST00000362273 69 ntBASIC0.71□□□□□ -2.3
CALR3Q96L12 RNU6-990P-201ENST00000364385 104 ntBASIC0.71□□□□□ -2.3
CALR3Q96L12 MIR501-201ENST00000390204 84 ntBASIC0.71□□□□□ -2.3
CALR3Q96L12 MIR103A1-201ENST00000362165 78 ntBASIC0.7□□□□□ -2.3
CALR3Q96L12 SNORD45.1-201ENST00000363181 77 ntBASIC0.7□□□□□ -2.3
CALR3Q96L12 RNU6-587P-201ENST00000391282 106 ntBASIC0.7□□□□□ -2.3
CALR3Q96L12 MIR4677-201ENST00000584153 80 ntBASIC0.7□□□□□ -2.3
CALR3Q96L12 MIR6835-201ENST00000621552 64 ntBASIC0.7□□□□□ -2.3
CALR3Q96L12 MIR516B1-201ENST00000385211 90 ntBASIC0.69□□□□□ -2.3
CALR3Q96L12 RPS29P1-201ENST00000465274 159 ntBASIC0.69□□□□□ -2.3
CALR3Q96L12 MIR548AD-201ENST00000584780 82 ntBASIC0.69□□□□□ -2.3
CALR3Q96L12 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.69□□□□□ -2.3
CALR3Q96L12 SNORA2.1-201ENST00000363089 137 ntBASIC0.68□□□□□ -2.3
CALR3Q96L12 RNU6-1241P-201ENST00000384536 107 ntBASIC0.68□□□□□ -2.3
CALR3Q96L12 RNU7-129P-201ENST00000516128 62 ntBASIC0.68□□□□□ -2.3
CALR3Q96L12 MIR8053-201ENST00000613344 75 ntBASIC0.68□□□□□ -2.3
CALR3Q96L12 uc_338.17-201ENST00000619633 179 ntBASIC0.68□□□□□ -2.3
CALR3Q96L12 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.67□□□□□ -2.3
CALR3Q96L12 SNORD114-27-201ENST00000363766 70 ntBASIC0.67□□□□□ -2.3
CALR3Q96L12 MIR216A-201ENST00000385063 110 ntBASIC0.67□□□□□ -2.3
CALR3Q96L12 MIR154-201ENST00000385243 84 ntBASIC0.67□□□□□ -2.3
CALR3Q96L12 RNU6-687P-201ENST00000516443 89 ntBASIC0.67□□□□□ -2.3
CALR3Q96L12 RNA5SP102-201ENST00000516865 106 ntBASIC0.67□□□□□ -2.3
CALR3Q96L12 SNORA9.1-201ENST00000362412 131 ntBASIC0.66□□□□□ -2.3
CALR3Q96L12 Y_RNA.565-201ENST00000384719 101 ntBASIC0.66□□□□□ -2.3
CALR3Q96L12 RNU6-1015P-201ENST00000517121 99 ntBASIC0.66□□□□□ -2.3
CALR3Q96L12 MIR20A-201ENST00000362279 71 ntBASIC0.65□□□□□ -2.31
CALR3Q96L12 RNU6-523P-201ENST00000516304 54 ntBASIC0.65□□□□□ -2.31
CALR3Q96L12 MIR499B-201ENST00000636498 73 ntBASIC0.65□□□□□ -2.31
CALR3Q96L12 AC090625.1-201ENST00000357130 210 ntBASIC0.64□□□□□ -2.31
CALR3Q96L12 SNORD114-29-201ENST00000364819 70 ntBASIC0.64□□□□□ -2.31
CALR3Q96L12 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
CALR3Q96L12 RNU6-604P-201ENST00000390917 100 ntBASIC0.64□□□□□ -2.31
CALR3Q96L12 AC244090.1-201ENST00000441884 93 ntBASIC0.64□□□□□ -2.31
CALR3Q96L12 AC084368.1-201ENST00000620935 65 ntBASIC0.64□□□□□ -2.31
CALR3Q96L12 MIR6767-201ENST00000637302 66 ntBASIC0.64□□□□□ -2.31
CALR3Q96L12 Y_RNA.250-201ENST00000364542 110 ntBASIC0.63□□□□□ -2.31
CALR3Q96L12 AC073261.1-201ENST00000429409 121 ntBASIC0.63□□□□□ -2.31
CALR3Q96L12 SNORA40.17-201ENST00000517256 115 ntBASIC0.63□□□□□ -2.31
CALR3Q96L12 RNA5SP147-201ENST00000516493 109 ntBASIC0.62□□□□□ -2.31
CALR3Q96L12 RNA5SP62-201ENST00000363457 110 ntBASIC0.61□□□□□ -2.31
CALR3Q96L12 MIR548E-201ENST00000408287 88 ntBASIC0.61□□□□□ -2.31
CALR3Q96L12 RNU6-871P-201ENST00000516122 100 ntBASIC0.61□□□□□ -2.31
CALR3Q96L12 SNORD115-22-201ENST00000364456 82 ntBASIC0.6□□□□□ -2.31
CALR3Q96L12 SNORA63.6-201ENST00000364921 119 ntBASIC0.6□□□□□ -2.31
CALR3Q96L12 RNU7-188P-201ENST00000517063 64 ntBASIC0.6□□□□□ -2.31
CALR3Q96L12 MIR582-201ENST00000365731 98 ntBASIC0.59□□□□□ -2.31
CALR3Q96L12 RNU6-815P-201ENST00000384080 113 ntBASIC0.59□□□□□ -2.31
CALR3Q96L12 AC021146.9-201ENST00000512503 156 ntBASIC0.59□□□□□ -2.31
CALR3Q96L12 MIR96-201ENST00000362288 78 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 Y_RNA.164-201ENST00000363709 102 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 RNU1-93P-201ENST00000364704 169 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 RNU6-1327P-201ENST00000365302 105 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 MIR508-201ENST00000384857 115 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 MIR1276-201ENST00000408707 83 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 RNU6-634P-201ENST00000459134 106 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 MIR6504-201ENST00000613520 61 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 MIR8070-201ENST00000616510 88 ntBASIC0.58□□□□□ -2.32
CALR3Q96L12 AL157398.1-201ENST00000452981 186 ntBASIC0.57□□□□□ -2.32
CALR3Q96L12 AC069113.3-201ENST00000521019 150 ntBASIC0.57□□□□□ -2.32
CALR3Q96L12 MIR3925-201ENST00000584674 77 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 306.8 ms