Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 AL513043.2-201ENST00000573941 143 ntBASIC-1.41□□□□□ -2.64
USP47Q96K76 MIR3140-201ENST00000583685 90 ntBASIC-1.41□□□□□ -2.64
USP47Q96K76 MIR382-201ENST00000637119 76 ntBASIC-1.41□□□□□ -2.64
USP47Q96K76 RNU6-132P-201ENST00000383863 107 ntBASIC-1.42□□□□□ -2.64
USP47Q96K76 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.42□□□□□ -2.64
USP47Q96K76 RNU6-327P-201ENST00000516270 127 ntBASIC-1.42□□□□□ -2.64
USP47Q96K76 RNA5SP461-201ENST00000516451 104 ntBASIC-1.42□□□□□ -2.64
USP47Q96K76 MIR548X2-201ENST00000579776 100 ntBASIC-1.42□□□□□ -2.64
USP47Q96K76 MIR4503-201ENST00000582187 83 ntBASIC-1.42□□□□□ -2.64
USP47Q96K76 SNORA63.2-201ENST00000362603 126 ntBASIC-1.43□□□□□ -2.64
USP47Q96K76 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.43□□□□□ -2.64
USP47Q96K76 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.43□□□□□ -2.64
USP47Q96K76 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.43□□□□□ -2.64
USP47Q96K76 SNORD115-23-201ENST00000364461 82 ntBASIC-1.44□□□□□ -2.64
USP47Q96K76 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.44□□□□□ -2.64
USP47Q96K76 MIR124-2-201ENST00000385081 109 ntBASIC-1.44□□□□□ -2.64
USP47Q96K76 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.44□□□□□ -2.64
USP47Q96K76 U7.2-201ENST00000607576 63 ntBASIC-1.44□□□□□ -2.64
USP47Q96K76 SNORD116-18-201ENST00000383961 92 ntBASIC-1.45□□□□□ -2.64
USP47Q96K76 MIR4694-201ENST00000578534 80 ntBASIC-1.45□□□□□ -2.64
USP47Q96K76 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.45□□□□□ -2.64
USP47Q96K76 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.46□□□□□ -2.64
USP47Q96K76 RNU6-832P-201ENST00000363319 107 ntBASIC-1.46□□□□□ -2.64
USP47Q96K76 RNU6-990P-201ENST00000364385 104 ntBASIC-1.46□□□□□ -2.64
USP47Q96K76 MIR548U-201ENST00000390728 81 ntBASIC-1.46□□□□□ -2.64
USP47Q96K76 U6.96-201ENST00000636425 70 ntBASIC-1.46□□□□□ -2.64
USP47Q96K76 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.47□□□□□ -2.64
USP47Q96K76 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.47□□□□□ -2.64
USP47Q96K76 Y_RNA.489-201ENST00000384410 101 ntBASIC-1.47□□□□□ -2.64
USP47Q96K76 SNORD58C-201ENST00000365223 64 ntBASIC-1.47□□□□□ -2.65
USP47Q96K76 SNORA62.4-201ENST00000365504 151 ntBASIC-1.47□□□□□ -2.65
USP47Q96K76 AC068339.1-201ENST00000526965 141 ntBASIC-1.47□□□□□ -2.65
USP47Q96K76 YWHAEP3-201ENST00000582767 121 ntBASIC-1.47□□□□□ -2.65
USP47Q96K76 RNU6-208P-201ENST00000362431 107 ntBASIC-1.48□□□□□ -2.65
USP47Q96K76 RNU6-196P-201ENST00000384315 107 ntBASIC-1.48□□□□□ -2.65
USP47Q96K76 MIR147A-201ENST00000385079 72 ntBASIC-1.48□□□□□ -2.65
USP47Q96K76 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.48□□□□□ -2.65
USP47Q96K76 AC021146.9-201ENST00000512503 156 ntBASIC-1.48□□□□□ -2.65
USP47Q96K76 MIR3064-201ENST00000581130 66 ntBASIC-1.48□□□□□ -2.65
USP47Q96K76 RNU6-394P-201ENST00000410735 107 ntBASIC-1.49□□□□□ -2.65
USP47Q96K76 HLA-S-202ENST00000425174 53 ntBASIC-1.49□□□□□ -2.65
USP47Q96K76 RNA5SP180-201ENST00000516181 101 ntBASIC-1.49□□□□□ -2.65
USP47Q96K76 RNY3P2-201ENST00000362918 102 ntBASIC-1.5□□□□□ -2.65
USP47Q96K76 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.5□□□□□ -2.65
USP47Q96K76 RNU6-574P-201ENST00000384265 107 ntBASIC-1.5□□□□□ -2.65
USP47Q96K76 MIR3613-201ENST00000579844 87 ntBASIC-1.5□□□□□ -2.65
USP47Q96K76 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.5□□□□□ -2.65
USP47Q96K76 SNORD114-17-201ENST00000364699 75 ntBASIC-1.51□□□□□ -2.65
USP47Q96K76 Y_RNA.346-201ENST00000365385 112 ntBASIC-1.51□□□□□ -2.65
USP47Q96K76 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.51□□□□□ -2.65
USP47Q96K76 MIR4439-201ENST00000583746 80 ntBASIC-1.51□□□□□ -2.65
USP47Q96K76 AC104996.3-201ENST00000590718 94 ntBASIC-1.51□□□□□ -2.65
USP47Q96K76 Y_RNA.8-201ENST00000362353 102 ntBASIC-1.52□□□□□ -2.65
USP47Q96K76 RNU6-200P-201ENST00000364743 107 ntBASIC-1.52□□□□□ -2.65
USP47Q96K76 SNORA24B-201ENST00000384176 131 ntBASIC-1.52□□□□□ -2.65
USP47Q96K76 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.52□□□□□ -2.65
USP47Q96K76 RNU6-644P-201ENST00000391155 98 ntBASIC-1.52□□□□□ -2.65
USP47Q96K76 RNU7-24P-201ENST00000458867 62 ntBASIC-1.52□□□□□ -2.65
USP47Q96K76 AC026421.1-201ENST00000519101 163 ntBASIC-1.52□□□□□ -2.65
USP47Q96K76 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.52□□□□□ -2.65
USP47Q96K76 RNY4P27-201ENST00000363341 96 ntBASIC-1.53□□□□□ -2.65
USP47Q96K76 Y_RNA.400-201ENST00000383963 111 ntBASIC-1.53□□□□□ -2.65
USP47Q96K76 SNORD75.2-201ENST00000408784 58 ntBASIC-1.53□□□□□ -2.65
USP47Q96K76 SNORD4B-201ENST00000459083 72 ntBASIC-1.53□□□□□ -2.65
USP47Q96K76 RNU6-1045P-201ENST00000516321 107 ntBASIC-1.53□□□□□ -2.65
USP47Q96K76 MIR548Z-201ENST00000584743 97 ntBASIC-1.53□□□□□ -2.65
USP47Q96K76 AC103810.7-201ENST00000607821 91 ntBASIC-1.53□□□□□ -2.65
USP47Q96K76 Y_RNA.29-201ENST00000362570 113 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 MIR548A1-201ENST00000385041 97 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 MIR569-201ENST00000385228 96 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 MIR8485-201ENST00000401372 91 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 MTND3P2-201ENST00000438452 342 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 RNA5SP272-201ENST00000516095 111 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 RNU6-158P-201ENST00000517104 100 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 MIR4679-2-201ENST00000578358 77 ntBASIC-1.54□□□□□ -2.66
USP47Q96K76 SNORD45B-201ENST00000364617 72 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 RNU6-804P-201ENST00000384286 107 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 RNU6-1011P-201ENST00000384668 107 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 RNU6-813P-201ENST00000384691 107 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 Y_RNA.630-201ENST00000411370 108 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 AC138207.3-201ENST00000585289 166 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 AC004792.1-201ENST00000614523 137 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 AL035470.1-201ENST00000622571 220 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 AC090617.8-201ENST00000623339 167 ntBASIC-1.55□□□□□ -2.66
USP47Q96K76 RNU6-226P-201ENST00000363778 107 ntBASIC-1.56□□□□□ -2.66
USP47Q96K76 snoU83B.1-201ENST00000517136 88 ntBASIC-1.56□□□□□ -2.66
USP47Q96K76 AL353803.5-201ENST00000599815 141 ntBASIC-1.56□□□□□ -2.66
USP47Q96K76 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.57□□□□□ -2.66
USP47Q96K76 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.57□□□□□ -2.66
USP47Q96K76 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.57□□□□□ -2.66
USP47Q96K76 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.57□□□□□ -2.66
USP47Q96K76 MIR3144-201ENST00000579460 79 ntBASIC-1.57□□□□□ -2.66
USP47Q96K76 Y_RNA.95-201ENST00000363079 95 ntBASIC-1.58□□□□□ -2.66
USP47Q96K76 Y_RNA.162-201ENST00000363683 102 ntBASIC-1.58□□□□□ -2.66
USP47Q96K76 Y_RNA.398-201ENST00000383952 99 ntBASIC-1.58□□□□□ -2.66
USP47Q96K76 RNU6-260P-201ENST00000384092 107 ntBASIC-1.58□□□□□ -2.66
USP47Q96K76 Y_RNA.467-201ENST00000384297 102 ntBASIC-1.58□□□□□ -2.66
USP47Q96K76 RNU6-519P-201ENST00000410590 108 ntBASIC-1.58□□□□□ -2.66
USP47Q96K76 MIR5591-201ENST00000578248 65 ntBASIC-1.58□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 280.8 ms