Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.34□□□□□ -2.19
SHKBP1Q8TBC3 RNU5B-6P-201ENST00000516765 68 ntBASIC1.34□□□□□ -2.19
SHKBP1Q8TBC3 MIR3938-201ENST00000582157 103 ntBASIC1.34□□□□□ -2.19
SHKBP1Q8TBC3 SNORD114-4-201ENST00000363962 75 ntBASIC1.33□□□□□ -2.2
SHKBP1Q8TBC3 SNORA8.2-201ENST00000384372 139 ntBASIC1.33□□□□□ -2.2
SHKBP1Q8TBC3 MIR521-2-201ENST00000384818 87 ntBASIC1.33□□□□□ -2.2
SHKBP1Q8TBC3 U7.7-201ENST00000459276 60 ntBASIC1.33□□□□□ -2.2
SHKBP1Q8TBC3 MIR3678-201ENST00000578455 94 ntBASIC1.33□□□□□ -2.2
SHKBP1Q8TBC3 MIR548V-201ENST00000584165 80 ntBASIC1.33□□□□□ -2.2
SHKBP1Q8TBC3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.32□□□□□ -2.2
SHKBP1Q8TBC3 RNA5SP327-201ENST00000362494 101 ntBASIC1.32□□□□□ -2.2
SHKBP1Q8TBC3 RNU6-1162P-201ENST00000384443 104 ntBASIC1.32□□□□□ -2.2
SHKBP1Q8TBC3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.32□□□□□ -2.2
SHKBP1Q8TBC3 RNA5SP484-201ENST00000458857 111 ntBASIC1.32□□□□□ -2.2
SHKBP1Q8TBC3 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.32□□□□□ -2.2
SHKBP1Q8TBC3 MIR7978-201ENST00000636158 59 ntBASIC1.32□□□□□ -2.2
SHKBP1Q8TBC3 MIR96-201ENST00000362288 78 ntBASIC1.31□□□□□ -2.2
SHKBP1Q8TBC3 SNORD60.1-201ENST00000362451 73 ntBASIC1.31□□□□□ -2.2
SHKBP1Q8TBC3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.31□□□□□ -2.2
SHKBP1Q8TBC3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
SHKBP1Q8TBC3 FABP5P4-201ENST00000437203 171 ntBASIC1.31□□□□□ -2.2
SHKBP1Q8TBC3 snoU13.13-201ENST00000458842 104 ntBASIC1.31□□□□□ -2.2
SHKBP1Q8TBC3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.31□□□□□ -2.2
SHKBP1Q8TBC3 SNORD113-4-201ENST00000364802 75 ntBASIC1.3□□□□□ -2.2
SHKBP1Q8TBC3 MIR573-201ENST00000384964 99 ntBASIC1.3□□□□□ -2.2
SHKBP1Q8TBC3 MIR758-201ENST00000390227 88 ntBASIC1.3□□□□□ -2.2
SHKBP1Q8TBC3 MIR3612-201ENST00000579753 87 ntBASIC1.3□□□□□ -2.2
SHKBP1Q8TBC3 MIR4452-201ENST00000583004 71 ntBASIC1.3□□□□□ -2.2
SHKBP1Q8TBC3 SNORD114-22-201ENST00000365423 72 ntBASIC1.29□□□□□ -2.2
SHKBP1Q8TBC3 MIR19B1-201ENST00000384829 87 ntBASIC1.29□□□□□ -2.2
SHKBP1Q8TBC3 MIR630-201ENST00000384957 97 ntBASIC1.29□□□□□ -2.2
SHKBP1Q8TBC3 RNU6-955P-201ENST00000410497 104 ntBASIC1.29□□□□□ -2.2
SHKBP1Q8TBC3 Y_RNA.722-201ENST00000517279 114 ntBASIC1.29□□□□□ -2.2
SHKBP1Q8TBC3 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.29□□□□□ -2.2
SHKBP1Q8TBC3 AL162376.1-201ENST00000624117 175 ntBASIC1.29□□□□□ -2.2
SHKBP1Q8TBC3 Y_RNA.633-201ENST00000459107 95 ntBASIC1.28□□□□□ -2.2
SHKBP1Q8TBC3 MIR6828-201ENST00000636181 60 ntBASIC1.28□□□□□ -2.2
SHKBP1Q8TBC3 MIR548C-201ENST00000384815 97 ntBASIC1.27□□□□□ -2.21
SHKBP1Q8TBC3 AC021146.9-201ENST00000512503 156 ntBASIC1.27□□□□□ -2.21
SHKBP1Q8TBC3 U2.7-201ENST00000619197 100 ntBASIC1.27□□□□□ -2.21
SHKBP1Q8TBC3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.27□□□□□ -2.21
SHKBP1Q8TBC3 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
SHKBP1Q8TBC3 RNU7-174P-201ENST00000516248 59 ntBASIC1.26□□□□□ -2.21
SHKBP1Q8TBC3 SNORD114-27-201ENST00000363766 70 ntBASIC1.25□□□□□ -2.21
SHKBP1Q8TBC3 MIR517B-201ENST00000385102 67 ntBASIC1.25□□□□□ -2.21
SHKBP1Q8TBC3 SNORD124-201ENST00000459577 104 ntBASIC1.25□□□□□ -2.21
SHKBP1Q8TBC3 RNU6-698P-201ENST00000363523 107 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 RNU1-93P-201ENST00000364704 169 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 RNU6-34P-201ENST00000364874 107 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 SNORA33.1-201ENST00000364957 130 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 RNU6-936P-201ENST00000384005 107 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 SNORA15B-2-201ENST00000384058 135 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 SNORA15B-1-201ENST00000384334 135 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 MIR200A-201ENST00000384875 90 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 MIR489-201ENST00000384923 84 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 RNU6-808P-201ENST00000391233 108 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 SCARNA17.3-201ENST00000516381 125 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 U4.4-201ENST00000620626 117 ntBASIC1.24□□□□□ -2.21
SHKBP1Q8TBC3 MIR652-201ENST00000385278 98 ntBASIC1.23□□□□□ -2.21
SHKBP1Q8TBC3 SNORD113-2-201ENST00000391082 72 ntBASIC1.23□□□□□ -2.21
SHKBP1Q8TBC3 Y_RNA.125-201ENST00000363371 111 ntBASIC1.22□□□□□ -2.21
SHKBP1Q8TBC3 SNORA63.6-201ENST00000364921 119 ntBASIC1.22□□□□□ -2.21
SHKBP1Q8TBC3 MIR582-201ENST00000365731 98 ntBASIC1.22□□□□□ -2.21
SHKBP1Q8TBC3 Y_RNA.407-201ENST00000383986 113 ntBASIC1.22□□□□□ -2.21
SHKBP1Q8TBC3 MIR548AE1-201ENST00000583292 70 ntBASIC1.22□□□□□ -2.21
SHKBP1Q8TBC3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SHKBP1Q8TBC3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.22□□□□□ -2.21
SHKBP1Q8TBC3 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 SNORA36.1-201ENST00000363424 132 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 SNORD26-201ENST00000384147 75 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 RNU6-1184P-201ENST00000384588 108 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 snoU13.18-201ENST00000459483 104 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 RNA5SP227-201ENST00000516184 113 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 AC025627.3-201ENST00000582078 182 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 uc_338.10-201ENST00000621872 182 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 MIR6767-201ENST00000637302 66 ntBASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SHKBP1Q8TBC3 MIR548E-201ENST00000408287 88 ntBASIC1.2□□□□□ -2.22
SHKBP1Q8TBC3 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.2□□□□□ -2.22
SHKBP1Q8TBC3 MIR18A-201ENST00000362310 71 ntBASIC1.19□□□□□ -2.22
SHKBP1Q8TBC3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.19□□□□□ -2.22
SHKBP1Q8TBC3 MIR4295-201ENST00000585286 85 ntBASIC1.19□□□□□ -2.22
SHKBP1Q8TBC3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SHKBP1Q8TBC3 MIR520E-201ENST00000384867 87 ntBASIC1.18□□□□□ -2.22
SHKBP1Q8TBC3 MIR4473-201ENST00000583731 91 ntBASIC1.18□□□□□ -2.22
SHKBP1Q8TBC3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
SHKBP1Q8TBC3 SNORD110-201ENST00000408189 75 ntBASIC1.17□□□□□ -2.22
SHKBP1Q8TBC3 MIR1285-1-201ENST00000408593 84 ntBASIC1.17□□□□□ -2.22
SHKBP1Q8TBC3 AC006210.1-201ENST00000424882 111 ntBASIC1.17□□□□□ -2.22
SHKBP1Q8TBC3 AC087343.1-201ENST00000477341 475 ntBASIC1.17□□□□□ -2.22
SHKBP1Q8TBC3 RNA5SP255-201ENST00000516370 107 ntBASIC1.17□□□□□ -2.22
SHKBP1Q8TBC3 RNA5SP268-201ENST00000516828 124 ntBASIC1.17□□□□□ -2.22
SHKBP1Q8TBC3 RNU6-1312P-201ENST00000362425 108 ntBASIC1.16□□□□□ -2.22
SHKBP1Q8TBC3 AC011195.1-201ENST00000578177 177 ntBASIC1.16□□□□□ -2.22
SHKBP1Q8TBC3 MIR7107-201ENST00000611489 80 ntBASIC1.16□□□□□ -2.22
SHKBP1Q8TBC3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
SHKBP1Q8TBC3 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
SHKBP1Q8TBC3 RNU6-520P-201ENST00000384717 104 ntBASIC1.15□□□□□ -2.23
SHKBP1Q8TBC3 RPS29P1-201ENST00000465274 159 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 317.7 ms