Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 RNU6-231P-201ENST00000517122 103 ntBASIC1.67□□□□□ -2.14
NEDD1Q8NHV4 MIR4421-201ENST00000578133 69 ntBASIC1.67□□□□□ -2.14
NEDD1Q8NHV4 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.67□□□□□ -2.14
NEDD1Q8NHV4 SNORA80D-201ENST00000384488 135 ntBASIC1.66□□□□□ -2.14
NEDD1Q8NHV4 RNU6-930P-201ENST00000390938 100 ntBASIC1.66□□□□□ -2.14
NEDD1Q8NHV4 RNU7-90P-201ENST00000459216 62 ntBASIC1.66□□□□□ -2.14
NEDD1Q8NHV4 AC021146.9-201ENST00000512503 156 ntBASIC1.66□□□□□ -2.14
NEDD1Q8NHV4 MIR4639-201ENST00000584938 69 ntBASIC1.66□□□□□ -2.14
NEDD1Q8NHV4 RNU4-33P-201ENST00000364316 85 ntBASIC1.65□□□□□ -2.15
NEDD1Q8NHV4 RNU6-269P-201ENST00000391077 97 ntBASIC1.65□□□□□ -2.15
NEDD1Q8NHV4 SNORA40.16-201ENST00000517238 121 ntBASIC1.65□□□□□ -2.15
NEDD1Q8NHV4 MIR8070-201ENST00000616510 88 ntBASIC1.65□□□□□ -2.15
NEDD1Q8NHV4 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.64□□□□□ -2.15
NEDD1Q8NHV4 RNU6-997P-201ENST00000384725 107 ntBASIC1.64□□□□□ -2.15
NEDD1Q8NHV4 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.64□□□□□ -2.15
NEDD1Q8NHV4 SNORD18A-201ENST00000363753 72 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 SNORD114-4-201ENST00000363962 75 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 Y_RNA.246-201ENST00000364495 108 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 MIR582-201ENST00000365731 98 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 RNA5SP484-201ENST00000458857 111 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 RNU7-119P-201ENST00000459279 63 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 RNU1-92P-201ENST00000517017 135 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 RNA5SP47-201ENST00000517230 109 ntBASIC1.63□□□□□ -2.15
NEDD1Q8NHV4 RNU1-78P-201ENST00000391248 165 ntBASIC1.62□□□□□ -2.15
NEDD1Q8NHV4 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
NEDD1Q8NHV4 SNORA9.1-201ENST00000362412 131 ntBASIC1.61□□□□□ -2.15
NEDD1Q8NHV4 RNU6-716P-201ENST00000365621 103 ntBASIC1.61□□□□□ -2.15
NEDD1Q8NHV4 SNORA15B-2-201ENST00000384058 135 ntBASIC1.61□□□□□ -2.15
NEDD1Q8NHV4 SNORA15B-1-201ENST00000384334 135 ntBASIC1.61□□□□□ -2.15
NEDD1Q8NHV4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
NEDD1Q8NHV4 snoU13.18-201ENST00000459483 104 ntBASIC1.61□□□□□ -2.15
NEDD1Q8NHV4 Y_RNA.224-201ENST00000364308 111 ntBASIC1.6□□□□□ -2.15
NEDD1Q8NHV4 SNORA8.2-201ENST00000384372 139 ntBASIC1.59□□□□□ -2.15
NEDD1Q8NHV4 MIR652-201ENST00000385278 98 ntBASIC1.59□□□□□ -2.15
NEDD1Q8NHV4 MIR758-201ENST00000390227 88 ntBASIC1.59□□□□□ -2.15
NEDD1Q8NHV4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.59□□□□□ -2.15
NEDD1Q8NHV4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.15
NEDD1Q8NHV4 RNU6-135P-201ENST00000516769 101 ntBASIC1.59□□□□□ -2.15
NEDD1Q8NHV4 SNORD116.2-201ENST00000391251 93 ntBASIC1.58□□□□□ -2.16
NEDD1Q8NHV4 MIR548E-201ENST00000408287 88 ntBASIC1.58□□□□□ -2.16
NEDD1Q8NHV4 MIR548L-201ENST00000408303 86 ntBASIC1.58□□□□□ -2.16
NEDD1Q8NHV4 RNA5SP61-201ENST00000516453 100 ntBASIC1.58□□□□□ -2.16
NEDD1Q8NHV4 MIR548AE1-201ENST00000583292 70 ntBASIC1.58□□□□□ -2.16
NEDD1Q8NHV4 AC090617.8-201ENST00000623339 167 ntBASIC1.58□□□□□ -2.16
NEDD1Q8NHV4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
NEDD1Q8NHV4 SNORA63.6-201ENST00000364921 119 ntBASIC1.57□□□□□ -2.16
NEDD1Q8NHV4 SCARNA17.3-201ENST00000516381 125 ntBASIC1.57□□□□□ -2.16
NEDD1Q8NHV4 MIR548X-201ENST00000580069 75 ntBASIC1.57□□□□□ -2.16
NEDD1Q8NHV4 MIR3660-201ENST00000584845 100 ntBASIC1.57□□□□□ -2.16
NEDD1Q8NHV4 AL353770.2-201ENST00000620024 78 ntBASIC1.57□□□□□ -2.16
NEDD1Q8NHV4 SNORD116-16-201ENST00000384533 92 ntBASIC1.55□□□□□ -2.16
NEDD1Q8NHV4 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.55□□□□□ -2.16
NEDD1Q8NHV4 RPS29P23-201ENST00000458635 123 ntBASIC1.55□□□□□ -2.16
NEDD1Q8NHV4 U7.7-201ENST00000459276 60 ntBASIC1.55□□□□□ -2.16
NEDD1Q8NHV4 CYP3A54P-201ENST00000566950 75 ntBASIC1.55□□□□□ -2.16
NEDD1Q8NHV4 MIR548AG1-201ENST00000579932 66 ntBASIC1.55□□□□□ -2.16
NEDD1Q8NHV4 AL162376.1-201ENST00000624117 175 ntBASIC1.55□□□□□ -2.16
NEDD1Q8NHV4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.54□□□□□ -2.16
NEDD1Q8NHV4 MIR545-201ENST00000385085 106 ntBASIC1.54□□□□□ -2.16
NEDD1Q8NHV4 AC002429.1-201ENST00000437672 148 ntBASIC1.54□□□□□ -2.16
NEDD1Q8NHV4 MIR3678-201ENST00000578455 94 ntBASIC1.54□□□□□ -2.16
NEDD1Q8NHV4 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
NEDD1Q8NHV4 Y_RNA.74-201ENST00000362911 99 ntBASIC1.53□□□□□ -2.16
NEDD1Q8NHV4 Y_RNA.282-201ENST00000364793 102 ntBASIC1.53□□□□□ -2.16
NEDD1Q8NHV4 SNORA25.8-201ENST00000364831 128 ntBASIC1.53□□□□□ -2.16
NEDD1Q8NHV4 RNU6-392P-201ENST00000364926 101 ntBASIC1.53□□□□□ -2.16
NEDD1Q8NHV4 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
NEDD1Q8NHV4 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.52□□□□□ -2.17
NEDD1Q8NHV4 RNU6-469P-201ENST00000516253 101 ntBASIC1.52□□□□□ -2.17
NEDD1Q8NHV4 MIR7110-201ENST00000612638 86 ntBASIC1.52□□□□□ -2.17
NEDD1Q8NHV4 Y_RNA.407-201ENST00000383986 113 ntBASIC1.51□□□□□ -2.17
NEDD1Q8NHV4 RNU6-42P-201ENST00000384165 107 ntBASIC1.51□□□□□ -2.17
NEDD1Q8NHV4 MIR489-201ENST00000384923 84 ntBASIC1.51□□□□□ -2.17
NEDD1Q8NHV4 SCARNA16.5-201ENST00000517114 183 ntBASIC1.51□□□□□ -2.17
NEDD1Q8NHV4 SNORA70.22-201ENST00000517160 124 ntBASIC1.51□□□□□ -2.17
NEDD1Q8NHV4 RNU6-810P-201ENST00000364001 107 ntBASIC1.5□□□□□ -2.17
NEDD1Q8NHV4 MIR516B1-201ENST00000385211 90 ntBASIC1.5□□□□□ -2.17
NEDD1Q8NHV4 SNORA40B-201ENST00000385573 128 ntBASIC1.5□□□□□ -2.17
NEDD1Q8NHV4 SNORD89-201ENST00000390981 114 ntBASIC1.5□□□□□ -2.17
NEDD1Q8NHV4 AC068338.1-201ENST00000565567 176 ntBASIC1.5□□□□□ -2.17
NEDD1Q8NHV4 MIR6828-201ENST00000636181 60 ntBASIC1.5□□□□□ -2.17
NEDD1Q8NHV4 RNU6-838P-201ENST00000363399 108 ntBASIC1.49□□□□□ -2.17
NEDD1Q8NHV4 MIR519A2-201ENST00000384990 87 ntBASIC1.49□□□□□ -2.17
NEDD1Q8NHV4 SNORD105-201ENST00000386910 85 ntBASIC1.49□□□□□ -2.17
NEDD1Q8NHV4 SNORD12-201ENST00000391002 90 ntBASIC1.49□□□□□ -2.17
NEDD1Q8NHV4 MIR6734-201ENST00000621166 68 ntBASIC1.49□□□□□ -2.17
NEDD1Q8NHV4 RNU6-518P-201ENST00000516056 96 ntBASIC1.48□□□□□ -2.17
NEDD1Q8NHV4 RNA5SP220-201ENST00000516298 104 ntBASIC1.48□□□□□ -2.17
NEDD1Q8NHV4 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.48□□□□□ -2.17
NEDD1Q8NHV4 MIR4473-201ENST00000583731 91 ntBASIC1.48□□□□□ -2.17
NEDD1Q8NHV4 MIR6504-201ENST00000613520 61 ntBASIC1.48□□□□□ -2.17
NEDD1Q8NHV4 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.47□□□□□ -2.17
NEDD1Q8NHV4 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
NEDD1Q8NHV4 RNU6ATAC29P-201ENST00000408088 125 ntBASIC1.47□□□□□ -2.17
NEDD1Q8NHV4 AL021921.1-201ENST00000442774 93 ntBASIC1.47□□□□□ -2.17
NEDD1Q8NHV4 RNU6-1110P-201ENST00000516462 101 ntBASIC1.47□□□□□ -2.17
NEDD1Q8NHV4 MIR4490-201ENST00000582647 84 ntBASIC1.47□□□□□ -2.17
NEDD1Q8NHV4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
NEDD1Q8NHV4 SNORD1B-201ENST00000363091 84 ntBASIC1.46□□□□□ -2.18
NEDD1Q8NHV4 MIR3612-201ENST00000579753 87 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 224.3 ms