Protein–RNA interactions for Protein: Q6DD88

ATL3, Atlastin-3, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3Q6DD88 SNORA3B-201ENST00000391305 131 ntBASIC-0.86□□□□□ -2.55
ATL3Q6DD88 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.86□□□□□ -2.55
ATL3Q6DD88 RNU6-495P-201ENST00000362995 107 ntBASIC-0.87□□□□□ -2.55
ATL3Q6DD88 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.87□□□□□ -2.55
ATL3Q6DD88 RNU6-644P-201ENST00000391155 98 ntBASIC-0.87□□□□□ -2.55
ATL3Q6DD88 MIR5009-201ENST00000578736 100 ntBASIC-0.87□□□□□ -2.55
ATL3Q6DD88 MIR198-201ENST00000637333 62 ntBASIC-0.87□□□□□ -2.55
ATL3Q6DD88 SNORA63.2-201ENST00000362603 126 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 SNORA24B-201ENST00000384176 131 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 RNU6-813P-201ENST00000384691 107 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 MIR204-201ENST00000385200 110 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 SNORD4B-201ENST00000459083 72 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 FGF7P7-201ENST00000514120 227 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 MIR3115-201ENST00000577915 68 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 MIR3914-2-201ENST00000637339 95 ntBASIC-0.88□□□□□ -2.55
ATL3Q6DD88 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.89□□□□□ -2.55
ATL3Q6DD88 SNORD45B-201ENST00000364617 72 ntBASIC-0.89□□□□□ -2.55
ATL3Q6DD88 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.89□□□□□ -2.55
ATL3Q6DD88 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.89□□□□□ -2.55
ATL3Q6DD88 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.89□□□□□ -2.55
ATL3Q6DD88 MIR3064-201ENST00000581130 66 ntBASIC-0.89□□□□□ -2.55
ATL3Q6DD88 MIR3140-201ENST00000583685 90 ntBASIC-0.89□□□□□ -2.55
ATL3Q6DD88 Y_RNA.181-201ENST00000363872 101 ntBASIC-0.9□□□□□ -2.55
ATL3Q6DD88 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.9□□□□□ -2.55
ATL3Q6DD88 MIR196A1-201ENST00000388006 70 ntBASIC-0.9□□□□□ -2.55
ATL3Q6DD88 SNORA13-201ENST00000458790 133 ntBASIC-0.9□□□□□ -2.55
ATL3Q6DD88 AC103810.7-201ENST00000607821 91 ntBASIC-0.9□□□□□ -2.55
ATL3Q6DD88 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.91□□□□□ -2.56
ATL3Q6DD88 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.91□□□□□ -2.56
ATL3Q6DD88 MIR378F-201ENST00000578143 78 ntBASIC-0.91□□□□□ -2.56
ATL3Q6DD88 MIR4777-201ENST00000583710 86 ntBASIC-0.91□□□□□ -2.56
ATL3Q6DD88 RNY1P5-201ENST00000383890 115 ntBASIC-0.92□□□□□ -2.56
ATL3Q6DD88 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.92□□□□□ -2.56
ATL3Q6DD88 RNU6-337P-201ENST00000391243 106 ntBASIC-0.92□□□□□ -2.56
ATL3Q6DD88 RNU6-346P-201ENST00000516288 111 ntBASIC-0.92□□□□□ -2.56
ATL3Q6DD88 RNU6-971P-201ENST00000516920 106 ntBASIC-0.92□□□□□ -2.56
ATL3Q6DD88 RNU6-255P-201ENST00000516957 105 ntBASIC-0.92□□□□□ -2.56
ATL3Q6DD88 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 MIR548A1-201ENST00000385041 97 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 MIR518B-201ENST00000385127 83 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 MIR548U-201ENST00000390728 81 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 AC021146.6-201ENST00000514659 117 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 MIR5704-201ENST00000584029 77 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 AC104996.3-201ENST00000590718 94 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 MIR6773-201ENST00000612812 74 ntBASIC-0.93□□□□□ -2.56
ATL3Q6DD88 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.94□□□□□ -2.56
ATL3Q6DD88 RNU6-80P-201ENST00000384195 107 ntBASIC-0.94□□□□□ -2.56
ATL3Q6DD88 RNU7-24P-201ENST00000458867 62 ntBASIC-0.94□□□□□ -2.56
ATL3Q6DD88 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.94□□□□□ -2.56
ATL3Q6DD88 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.94□□□□□ -2.56
ATL3Q6DD88 MIR548Z-201ENST00000584743 97 ntBASIC-0.94□□□□□ -2.56
ATL3Q6DD88 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.95□□□□□ -2.56
ATL3Q6DD88 RNU6-721P-201ENST00000410155 105 ntBASIC-0.95□□□□□ -2.56
ATL3Q6DD88 RNU6-659P-201ENST00000516454 104 ntBASIC-0.95□□□□□ -2.56
ATL3Q6DD88 MIR6854-201ENST00000614935 69 ntBASIC-0.95□□□□□ -2.56
ATL3Q6DD88 MIR8068-201ENST00000618032 68 ntBASIC-0.95□□□□□ -2.56
ATL3Q6DD88 RNA5SP192-201ENST00000364404 120 ntBASIC-0.96□□□□□ -2.56
ATL3Q6DD88 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.96□□□□□ -2.56
ATL3Q6DD88 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.96□□□□□ -2.56
ATL3Q6DD88 SNORD33.1-201ENST00000516213 88 ntBASIC-0.96□□□□□ -2.56
ATL3Q6DD88 RNU6-62P-201ENST00000516526 102 ntBASIC-0.96□□□□□ -2.56
ATL3Q6DD88 SNORD115-23-201ENST00000364461 82 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 Y_RNA.281-201ENST00000364774 94 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 SNORA63.6-201ENST00000364921 119 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 MIRLET7B-201ENST00000385140 83 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 RNA5SP292-201ENST00000390974 118 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 RNU6-592P-201ENST00000411333 103 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.97□□□□□ -2.56
ATL3Q6DD88 AC012531.4-201ENST00000616509 177 ntBASIC-0.97□□□□□ -2.56
ATL3Q6DD88 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.98□□□□□ -2.57
ATL3Q6DD88 SNORD74.6-201ENST00000364796 70 ntBASIC-0.98□□□□□ -2.57
ATL3Q6DD88 SNORD90-201ENST00000391145 111 ntBASIC-0.98□□□□□ -2.57
ATL3Q6DD88 MIR1207-201ENST00000408249 87 ntBASIC-0.98□□□□□ -2.57
ATL3Q6DD88 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.98□□□□□ -2.57
ATL3Q6DD88 RNA5SP180-201ENST00000516181 101 ntBASIC-0.98□□□□□ -2.57
ATL3Q6DD88 U6.95-201ENST00000636931 70 ntBASIC-0.98□□□□□ -2.57
ATL3Q6DD88 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 RNU6-990P-201ENST00000364385 104 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 MIR548A3-201ENST00000385297 97 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 SNORD75.2-201ENST00000408784 58 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 RNU6-795P-201ENST00000516323 103 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 SNORD22.1-201ENST00000516331 125 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 RNU6-881P-201ENST00000516813 102 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 MIR3179-1-201ENST00000578940 84 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 MIR3179-2-201ENST00000579107 84 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 MIR3179-3-201ENST00000579566 84 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 MIR3179-4-201ENST00000617599 84 ntBASIC-0.99□□□□□ -2.57
ATL3Q6DD88 RNU4-36P-201ENST00000364294 144 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 SNORD114-3-201ENST00000364969 75 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 RNU6-1014P-201ENST00000383940 103 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 RNU6-24P-201ENST00000384440 107 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 RNU6-519P-201ENST00000410590 108 ntBASIC-1□□□□□ -2.57
ATL3Q6DD88 RNA5SP470-201ENST00000516463 106 ntBASIC-1□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 213.8 ms