Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RNU6V-201ENST00000384105 107 ntBASIC0.71□□□□□ -2.3
HERVK_113P62684 SNORA24B-201ENST00000384176 131 ntBASIC0.71□□□□□ -2.3
HERVK_113P62684 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
HERVK_113P62684 RNU6-380P-201ENST00000410207 107 ntBASIC0.71□□□□□ -2.3
HERVK_113P62684 AC006210.1-201ENST00000424882 111 ntBASIC0.71□□□□□ -2.3
HERVK_113P62684 AC093423.1-201ENST00000440817 142 ntBASIC0.71□□□□□ -2.3
HERVK_113P62684 AC073869.9-201ENST00000641610 120 ntBASIC0.71□□□□□ -2.3
HERVK_113P62684 Y_RNA.12-201ENST00000362393 112 ntBASIC0.7□□□□□ -2.3
HERVK_113P62684 RNU6-315P-201ENST00000362666 107 ntBASIC0.7□□□□□ -2.3
HERVK_113P62684 AC098934.3-201ENST00000430450 190 ntBASIC0.7□□□□□ -2.3
HERVK_113P62684 AC097510.1-201ENST00000510945 133 ntBASIC0.7□□□□□ -2.3
HERVK_113P62684 RNU4-54P-201ENST00000516428 129 ntBASIC0.7□□□□□ -2.3
HERVK_113P62684 Y_RNA.685-201ENST00000516532 108 ntBASIC0.7□□□□□ -2.3
HERVK_113P62684 MIR548O2-201ENST00000616090 70 ntBASIC0.7□□□□□ -2.3
HERVK_113P62684 MIR330-201ENST00000362196 94 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 MIRLET7A1-201ENST00000362295 80 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 Y_RNA.94-201ENST00000363068 106 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 SNORD118-201ENST00000363593 134 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 RNU6-945P-201ENST00000383947 107 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 MIR518A1-201ENST00000385068 85 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 RNU5B-6P-201ENST00000516765 68 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 AC243829.3-201ENST00000622177 108 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 MIR4773-1-201ENST00000637203 78 ntBASIC0.69□□□□□ -2.3
HERVK_113P62684 RNU6-824P-201ENST00000363724 104 ntBASIC0.68□□□□□ -2.3
HERVK_113P62684 RNU6-54P-201ENST00000365563 107 ntBASIC0.68□□□□□ -2.3
HERVK_113P62684 MT-TY-201ENST00000387409 66 ntBASIC0.68□□□□□ -2.3
HERVK_113P62684 RNU6-1275P-201ENST00000391087 107 ntBASIC0.68□□□□□ -2.3
HERVK_113P62684 SNORD110-201ENST00000408189 75 ntBASIC0.68□□□□□ -2.3
HERVK_113P62684 YWHAEP2-201ENST00000580066 112 ntBASIC0.68□□□□□ -2.3
HERVK_113P62684 YWHAEP3-201ENST00000582767 121 ntBASIC0.68□□□□□ -2.3
HERVK_113P62684 RNU6-1094P-201ENST00000362416 104 ntBASIC0.67□□□□□ -2.3
HERVK_113P62684 Y_RNA.423-201ENST00000384057 113 ntBASIC0.67□□□□□ -2.3
HERVK_113P62684 RNU2-59P-201ENST00000410482 191 ntBASIC0.67□□□□□ -2.3
HERVK_113P62684 RNU6-857P-201ENST00000515893 110 ntBASIC0.67□□□□□ -2.3
HERVK_113P62684 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.67□□□□□ -2.3
HERVK_113P62684 RNA5SP476-201ENST00000516613 103 ntBASIC0.67□□□□□ -2.3
HERVK_113P62684 SNORA70.25-201ENST00000612741 95 ntBASIC0.67□□□□□ -2.3
HERVK_113P62684 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
HERVK_113P62684 MIR4484-201ENST00000582855 83 ntBASIC0.66□□□□□ -2.3
HERVK_113P62684 AC069503.3-201ENST00000618674 145 ntBASIC0.66□□□□□ -2.3
HERVK_113P62684 RNU6-279P-201ENST00000391297 101 ntBASIC0.65□□□□□ -2.31
HERVK_113P62684 RNU6-229P-201ENST00000516614 102 ntBASIC0.65□□□□□ -2.31
HERVK_113P62684 MIR4473-201ENST00000583731 91 ntBASIC0.65□□□□□ -2.31
HERVK_113P62684 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.65□□□□□ -2.31
HERVK_113P62684 RNU6-340P-201ENST00000364005 107 ntBASIC0.64□□□□□ -2.31
HERVK_113P62684 RNU6-382P-201ENST00000365181 106 ntBASIC0.64□□□□□ -2.31
HERVK_113P62684 AC018659.1-201ENST00000551083 169 ntBASIC0.64□□□□□ -2.31
HERVK_113P62684 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.64□□□□□ -2.31
HERVK_113P62684 RNU6-681P-201ENST00000364012 104 ntBASIC0.63□□□□□ -2.31
HERVK_113P62684 MIR92A1-201ENST00000385233 78 ntBASIC0.63□□□□□ -2.31
HERVK_113P62684 RNU6-274P-201ENST00000459566 107 ntBASIC0.63□□□□□ -2.31
HERVK_113P62684 RNU6-807P-201ENST00000516805 107 ntBASIC0.63□□□□□ -2.31
HERVK_113P62684 RNU6-303P-201ENST00000517091 106 ntBASIC0.63□□□□□ -2.31
HERVK_113P62684 U6.81-201ENST00000612550 106 ntBASIC0.63□□□□□ -2.31
HERVK_113P62684 SNORA2A-201ENST00000383885 135 ntBASIC0.62□□□□□ -2.31
HERVK_113P62684 RNU6-24P-201ENST00000384440 107 ntBASIC0.62□□□□□ -2.31
HERVK_113P62684 SNORD75.2-201ENST00000408784 58 ntBASIC0.61□□□□□ -2.31
HERVK_113P62684 HAR1A.1-201ENST00000459583 118 ntBASIC0.61□□□□□ -2.31
HERVK_113P62684 RNU6-495P-201ENST00000362995 107 ntBASIC0.6□□□□□ -2.31
HERVK_113P62684 Y_RNA.532-201ENST00000384590 113 ntBASIC0.6□□□□□ -2.31
HERVK_113P62684 Y_RNA.606-201ENST00000410579 103 ntBASIC0.6□□□□□ -2.31
HERVK_113P62684 RNU1-29P-201ENST00000606574 126 ntBASIC0.6□□□□□ -2.31
HERVK_113P62684 MIR5087-201ENST00000635826 76 ntBASIC0.6□□□□□ -2.31
HERVK_113P62684 Y_RNA.244-201ENST00000364484 109 ntBASIC0.59□□□□□ -2.31
HERVK_113P62684 MIR1197-201ENST00000408818 88 ntBASIC0.59□□□□□ -2.31
HERVK_113P62684 AL157398.1-201ENST00000452981 186 ntBASIC0.59□□□□□ -2.31
HERVK_113P62684 SNORD42B-201ENST00000458893 67 ntBASIC0.59□□□□□ -2.31
HERVK_113P62684 MIR5706-201ENST00000579841 80 ntBASIC0.59□□□□□ -2.31
HERVK_113P62684 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.59□□□□□ -2.31
HERVK_113P62684 MIR1297-201ENST00000637311 77 ntBASIC0.59□□□□□ -2.31
HERVK_113P62684 AL691482.2-201ENST00000457453 84 ntBASIC0.58□□□□□ -2.32
HERVK_113P62684 SNORA68.3-201ENST00000515906 83 ntBASIC0.58□□□□□ -2.32
HERVK_113P62684 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.57□□□□□ -2.32
HERVK_113P62684 Y_RNA.407-201ENST00000383986 113 ntBASIC0.57□□□□□ -2.32
HERVK_113P62684 RNU6-35P-201ENST00000384530 107 ntBASIC0.57□□□□□ -2.32
HERVK_113P62684 MIR760-201ENST00000390220 80 ntBASIC0.57□□□□□ -2.32
HERVK_113P62684 RNU7-129P-201ENST00000516128 62 ntBASIC0.57□□□□□ -2.32
HERVK_113P62684 RNU6-638P-201ENST00000516582 104 ntBASIC0.57□□□□□ -2.32
HERVK_113P62684 uc_338.17-201ENST00000619633 179 ntBASIC0.57□□□□□ -2.32
HERVK_113P62684 MIR6755-201ENST00000619993 66 ntBASIC0.57□□□□□ -2.32
HERVK_113P62684 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
HERVK_113P62684 SNORD44.1-201ENST00000363202 61 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 RNU6-154P-201ENST00000384306 106 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 AC114737.2-201ENST00000421583 173 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 SCARNA18B-201ENST00000458806 135 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 RNU7-24P-201ENST00000458867 62 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 RNU6-1232P-201ENST00000516299 86 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 MIR548AE1-201ENST00000583292 70 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 U7.6-201ENST00000610841 64 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 AC243829.6-201ENST00000612652 106 ntBASIC0.56□□□□□ -2.32
HERVK_113P62684 SNORA8.1-201ENST00000384250 140 ntBASIC0.55□□□□□ -2.32
HERVK_113P62684 AC074348.1-201ENST00000426503 132 ntBASIC0.55□□□□□ -2.32
HERVK_113P62684 HMGN2P22-201ENST00000427588 175 ntBASIC0.55□□□□□ -2.32
HERVK_113P62684 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.55□□□□□ -2.32
HERVK_113P62684 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
HERVK_113P62684 MIR103A1-201ENST00000362165 78 ntBASIC0.54□□□□□ -2.32
HERVK_113P62684 RNU6-330P-201ENST00000363015 107 ntBASIC0.54□□□□□ -2.32
HERVK_113P62684 SNORD114-4-201ENST00000363962 75 ntBASIC0.54□□□□□ -2.32
HERVK_113P62684 MIR203A-201ENST00000384836 110 ntBASIC0.54□□□□□ -2.32
HERVK_113P62684 MIR889-201ENST00000401280 79 ntBASIC0.54□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms