Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 RNU6-752P-201ENST00000516376 102 ntBASIC1.06□□□□□ -2.24
RTP1P59025 MIR4698-201ENST00000577795 80 ntBASIC1.06□□□□□ -2.24
RTP1P59025 AC103810.9-201ENST00000606688 112 ntBASIC1.06□□□□□ -2.24
RTP1P59025 MIR6828-201ENST00000636181 60 ntBASIC1.06□□□□□ -2.24
RTP1P59025 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.05□□□□□ -2.24
RTP1P59025 RNU6-269P-201ENST00000391077 97 ntBASIC1.05□□□□□ -2.24
RTP1P59025 AL691482.2-201ENST00000457453 84 ntBASIC1.05□□□□□ -2.24
RTP1P59025 RNU6-539P-201ENST00000516665 103 ntBASIC1.05□□□□□ -2.24
RTP1P59025 MIR4714-201ENST00000580728 77 ntBASIC1.05□□□□□ -2.24
RTP1P59025 SNORD45.1-201ENST00000363181 77 ntBASIC1.04□□□□□ -2.24
RTP1P59025 SNORA36.1-201ENST00000363424 132 ntBASIC1.04□□□□□ -2.24
RTP1P59025 RNU1-141P-201ENST00000364623 158 ntBASIC1.04□□□□□ -2.24
RTP1P59025 MT-TY-201ENST00000387409 66 ntBASIC1.04□□□□□ -2.24
RTP1P59025 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.04□□□□□ -2.24
RTP1P59025 MIR4661-201ENST00000582720 75 ntBASIC1.04□□□□□ -2.24
RTP1P59025 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RTP1P59025 RNU6-1039P-201ENST00000383931 107 ntBASIC1.03□□□□□ -2.24
RTP1P59025 SNORA8.2-201ENST00000384372 139 ntBASIC1.03□□□□□ -2.24
RTP1P59025 SNORD42B-201ENST00000458893 67 ntBASIC1.03□□□□□ -2.24
RTP1P59025 MIR1273G-201ENST00000577677 100 ntBASIC1.03□□□□□ -2.24
RTP1P59025 MIR4460-201ENST00000577862 86 ntBASIC1.03□□□□□ -2.24
RTP1P59025 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.03□□□□□ -2.24
RTP1P59025 AL162376.1-201ENST00000624117 175 ntBASIC1.03□□□□□ -2.24
RTP1P59025 AL590095.2-201ENST00000604136 117 ntBASIC1.02□□□□□ -2.25
RTP1P59025 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
RTP1P59025 SNORD115-22-201ENST00000364456 82 ntBASIC1.01□□□□□ -2.25
RTP1P59025 RNU6-1187P-201ENST00000364771 110 ntBASIC1.01□□□□□ -2.25
RTP1P59025 RNU4-45P-201ENST00000365469 141 ntBASIC1.01□□□□□ -2.25
RTP1P59025 SNORD45A-201ENST00000384512 84 ntBASIC1.01□□□□□ -2.25
RTP1P59025 RNA5SP484-201ENST00000458857 111 ntBASIC1.01□□□□□ -2.25
RTP1P59025 RNA5SP227-201ENST00000516184 113 ntBASIC1.01□□□□□ -2.25
RTP1P59025 RNA5SP94-201ENST00000516917 108 ntBASIC1.01□□□□□ -2.25
RTP1P59025 RNU6-590P-201ENST00000365039 107 ntBASIC1□□□□□ -2.25
RTP1P59025 RNU6-649P-201ENST00000384463 107 ntBASIC1□□□□□ -2.25
RTP1P59025 RNU6-604P-201ENST00000390917 100 ntBASIC1□□□□□ -2.25
RTP1P59025 SNORD30.1-201ENST00000391309 70 ntBASIC1□□□□□ -2.25
RTP1P59025 RNA5SP222-201ENST00000411039 105 ntBASIC1□□□□□ -2.25
RTP1P59025 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1□□□□□ -2.25
RTP1P59025 RNA5SP268-201ENST00000516828 124 ntBASIC1□□□□□ -2.25
RTP1P59025 MIR8053-201ENST00000613344 75 ntBASIC1□□□□□ -2.25
RTP1P59025 MIR6509-201ENST00000614603 85 ntBASIC1□□□□□ -2.25
RTP1P59025 RNA5SP457-201ENST00000363657 124 ntBASIC0.99□□□□□ -2.25
RTP1P59025 MIR6513-201ENST00000621188 64 ntBASIC0.99□□□□□ -2.25
RTP1P59025 Y_RNA.178-201ENST00000363832 102 ntBASIC0.98□□□□□ -2.25
RTP1P59025 MIR203A-201ENST00000384836 110 ntBASIC0.98□□□□□ -2.25
RTP1P59025 RNU6-663P-201ENST00000391105 106 ntBASIC0.98□□□□□ -2.25
RTP1P59025 RNU5B-6P-201ENST00000516765 68 ntBASIC0.98□□□□□ -2.25
RTP1P59025 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.97□□□□□ -2.25
RTP1P59025 MIR7107-201ENST00000611489 80 ntBASIC0.97□□□□□ -2.25
RTP1P59025 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.97□□□□□ -2.25
RTP1P59025 Y_RNA.115-201ENST00000363272 98 ntBASIC0.96□□□□□ -2.26
RTP1P59025 SNORD113.1-201ENST00000363280 73 ntBASIC0.96□□□□□ -2.26
RTP1P59025 RNY1P8-201ENST00000383970 114 ntBASIC0.96□□□□□ -2.26
RTP1P59025 RNU6-881P-201ENST00000516813 102 ntBASIC0.96□□□□□ -2.26
RTP1P59025 AC018659.1-201ENST00000551083 169 ntBASIC0.96□□□□□ -2.26
RTP1P59025 AC069503.3-201ENST00000618674 145 ntBASIC0.96□□□□□ -2.26
RTP1P59025 RNU6-895P-201ENST00000384125 103 ntBASIC0.95□□□□□ -2.26
RTP1P59025 MIR936-201ENST00000401264 98 ntBASIC0.95□□□□□ -2.26
RTP1P59025 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.95□□□□□ -2.26
RTP1P59025 RPL39P28-201ENST00000465655 155 ntBASIC0.95□□□□□ -2.26
RTP1P59025 U6.111-201ENST00000636093 83 ntBASIC0.95□□□□□ -2.26
RTP1P59025 Y_RNA.386-201ENST00000383913 105 ntBASIC0.94□□□□□ -2.26
RTP1P59025 RNU6-260P-201ENST00000384092 107 ntBASIC0.94□□□□□ -2.26
RTP1P59025 MIR3657-201ENST00000584818 117 ntBASIC0.94□□□□□ -2.26
RTP1P59025 SNORD114-23-201ENST00000363536 72 ntBASIC0.93□□□□□ -2.26
RTP1P59025 RNU6-990P-201ENST00000364385 104 ntBASIC0.93□□□□□ -2.26
RTP1P59025 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
RTP1P59025 SNORA40.17-201ENST00000517256 115 ntBASIC0.93□□□□□ -2.26
RTP1P59025 AC073869.9-201ENST00000641610 120 ntBASIC0.93□□□□□ -2.26
RTP1P59025 RNU6-1216P-201ENST00000362590 107 ntBASIC0.92□□□□□ -2.26
RTP1P59025 SNORA36.2-201ENST00000384004 127 ntBASIC0.92□□□□□ -2.26
RTP1P59025 RNU6-800P-201ENST00000384473 103 ntBASIC0.92□□□□□ -2.26
RTP1P59025 SNORD116-24-201ENST00000384549 92 ntBASIC0.92□□□□□ -2.26
RTP1P59025 MIR608-201ENST00000384820 100 ntBASIC0.92□□□□□ -2.26
RTP1P59025 RNU6-351P-201ENST00000516097 100 ntBASIC0.92□□□□□ -2.26
RTP1P59025 RNU6-982P-201ENST00000516216 102 ntBASIC0.92□□□□□ -2.26
RTP1P59025 RNA5SP330-201ENST00000517096 96 ntBASIC0.92□□□□□ -2.26
RTP1P59025 RNA5SP517-201ENST00000364724 117 ntBASIC0.91□□□□□ -2.26
RTP1P59025 AC010487.4-201ENST00000637027 61 ntBASIC0.91□□□□□ -2.26
RTP1P59025 MIR924-201ENST00000638017 53 ntBASIC0.91□□□□□ -2.26
RTP1P59025 SNORD114-2-201ENST00000363953 78 ntBASIC0.9□□□□□ -2.27
RTP1P59025 SNORD110-201ENST00000408189 75 ntBASIC0.9□□□□□ -2.27
RTP1P59025 AC006210.1-201ENST00000424882 111 ntBASIC0.9□□□□□ -2.27
RTP1P59025 MIR4752-201ENST00000579672 72 ntBASIC0.9□□□□□ -2.27
RTP1P59025 SNORD114-4-201ENST00000363962 75 ntBASIC0.89□□□□□ -2.27
RTP1P59025 MIR508-201ENST00000384857 115 ntBASIC0.89□□□□□ -2.27
RTP1P59025 MIR140-201ENST00000385282 100 ntBASIC0.89□□□□□ -2.27
RTP1P59025 RNU6-630P-201ENST00000391258 106 ntBASIC0.89□□□□□ -2.27
RTP1P59025 ACA64.5-201ENST00000516207 127 ntBASIC0.89□□□□□ -2.27
RTP1P59025 AC005520.4-201ENST00000604337 90 ntBASIC0.89□□□□□ -2.27
RTP1P59025 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.89□□□□□ -2.27
RTP1P59025 MIR6835-201ENST00000621552 64 ntBASIC0.89□□□□□ -2.27
RTP1P59025 Y_RNA.68-201ENST00000362881 102 ntBASIC0.88□□□□□ -2.27
RTP1P59025 SNORA2.1-201ENST00000363089 137 ntBASIC0.88□□□□□ -2.27
RTP1P59025 RNA5SP147-201ENST00000516493 109 ntBASIC0.88□□□□□ -2.27
RTP1P59025 SNORA70.25-201ENST00000612741 95 ntBASIC0.88□□□□□ -2.27
RTP1P59025 Y_RNA.443-201ENST00000384135 111 ntBASIC0.87□□□□□ -2.27
RTP1P59025 MIR146A-201ENST00000385201 99 ntBASIC0.87□□□□□ -2.27
RTP1P59025 MIR1265-201ENST00000408444 86 ntBASIC0.87□□□□□ -2.27
RTP1P59025 MIR548AE1-201ENST00000583292 70 ntBASIC0.87□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 288.4 ms