Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 Y_RNA.205-201ENST00000364128 113 ntBASIC1.22□□□□□ -2.21
EPHA4P54764 MIR499A-201ENST00000384903 122 ntBASIC1.21□□□□□ -2.22
EPHA4P54764 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
EPHA4P54764 SNORA36.1-201ENST00000363424 132 ntBASIC1.2□□□□□ -2.22
EPHA4P54764 Y_RNA.250-201ENST00000364542 110 ntBASIC1.2□□□□□ -2.22
EPHA4P54764 Y_RNA.407-201ENST00000383986 113 ntBASIC1.2□□□□□ -2.22
EPHA4P54764 SNORA36.2-201ENST00000384004 127 ntBASIC1.2□□□□□ -2.22
EPHA4P54764 SNORD110-201ENST00000408189 75 ntBASIC1.2□□□□□ -2.22
EPHA4P54764 MIR1265-201ENST00000408444 86 ntBASIC1.2□□□□□ -2.22
EPHA4P54764 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.2□□□□□ -2.22
EPHA4P54764 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
EPHA4P54764 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
EPHA4P54764 SNORD116-24-201ENST00000384549 92 ntBASIC1.19□□□□□ -2.22
EPHA4P54764 RNU6-982P-201ENST00000516216 102 ntBASIC1.19□□□□□ -2.22
EPHA4P54764 AC018659.1-201ENST00000551083 169 ntBASIC1.19□□□□□ -2.22
EPHA4P54764 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
EPHA4P54764 MIR7107-201ENST00000611489 80 ntBASIC1.18□□□□□ -2.22
EPHA4P54764 AC103706.3-201ENST00000636297 85 ntBASIC1.18□□□□□ -2.22
EPHA4P54764 MIR1276-201ENST00000408707 83 ntBASIC1.17□□□□□ -2.22
EPHA4P54764 RNA5SP147-201ENST00000516493 109 ntBASIC1.17□□□□□ -2.22
EPHA4P54764 RNU6-990P-201ENST00000364385 104 ntBASIC1.16□□□□□ -2.22
EPHA4P54764 RNU6-645P-201ENST00000364649 106 ntBASIC1.16□□□□□ -2.22
EPHA4P54764 RNU6-1162P-201ENST00000384443 104 ntBASIC1.15□□□□□ -2.23
EPHA4P54764 MIR6504-201ENST00000613520 61 ntBASIC1.15□□□□□ -2.23
EPHA4P54764 MIR140-201ENST00000385282 100 ntBASIC1.14□□□□□ -2.23
EPHA4P54764 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.14□□□□□ -2.23
EPHA4P54764 RNA5SP102-201ENST00000516865 106 ntBASIC1.14□□□□□ -2.23
EPHA4P54764 SCARNA17.3-201ENST00000516381 125 ntBASIC1.13□□□□□ -2.23
EPHA4P54764 MIR4511-201ENST00000582784 87 ntBASIC1.13□□□□□ -2.23
EPHA4P54764 MIR4473-201ENST00000583731 91 ntBASIC1.13□□□□□ -2.23
EPHA4P54764 AC092634.7-201ENST00000621022 103 ntBASIC1.13□□□□□ -2.23
EPHA4P54764 Y_RNA.355-201ENST00000365462 98 ntBASIC1.12□□□□□ -2.23
EPHA4P54764 MIR7111-201ENST00000619751 72 ntBASIC1.12□□□□□ -2.23
EPHA4P54764 MIR6739-201ENST00000622461 75 ntBASIC1.12□□□□□ -2.23
EPHA4P54764 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC1.11□□□□□ -2.23
EPHA4P54764 MIR608-201ENST00000384820 100 ntBASIC1.11□□□□□ -2.23
EPHA4P54764 SNORD71-201ENST00000411292 86 ntBASIC1.11□□□□□ -2.23
EPHA4P54764 AC021146.9-201ENST00000512503 156 ntBASIC1.11□□□□□ -2.23
EPHA4P54764 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
EPHA4P54764 MIR5706-201ENST00000579841 80 ntBASIC1.1□□□□□ -2.23
EPHA4P54764 MIR4295-201ENST00000585286 85 ntBASIC1.1□□□□□ -2.23
EPHA4P54764 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.1□□□□□ -2.23
EPHA4P54764 MIR1285-1-201ENST00000408593 84 ntBASIC1.09□□□□□ -2.23
EPHA4P54764 OR2A41P-201ENST00000473586 105 ntBASIC1.09□□□□□ -2.23
EPHA4P54764 AC087343.1-201ENST00000477341 475 ntBASIC1.09□□□□□ -2.23
EPHA4P54764 RNU6-542P-201ENST00000516405 103 ntBASIC1.09□□□□□ -2.23
EPHA4P54764 U7.6-201ENST00000610841 64 ntBASIC1.09□□□□□ -2.23
EPHA4P54764 uc_338.10-201ENST00000621872 182 ntBASIC1.09□□□□□ -2.23
EPHA4P54764 RNA5SP517-201ENST00000364724 117 ntBASIC1.08□□□□□ -2.24
EPHA4P54764 RNU6-1187P-201ENST00000364771 110 ntBASIC1.08□□□□□ -2.24
EPHA4P54764 SNORA15B-2-201ENST00000384058 135 ntBASIC1.08□□□□□ -2.24
EPHA4P54764 SNORA15B-1-201ENST00000384334 135 ntBASIC1.08□□□□□ -2.24
EPHA4P54764 SNORA63.6-201ENST00000364921 119 ntBASIC1.07□□□□□ -2.24
EPHA4P54764 RNU6-110P-201ENST00000384508 104 ntBASIC1.07□□□□□ -2.24
EPHA4P54764 MIR652-201ENST00000385278 98 ntBASIC1.07□□□□□ -2.24
EPHA4P54764 RNA5SP215-201ENST00000363440 122 ntBASIC1.06□□□□□ -2.24
EPHA4P54764 MIR521-2-201ENST00000384818 87 ntBASIC1.06□□□□□ -2.24
EPHA4P54764 SNORA40.8-201ENST00000411034 126 ntBASIC1.06□□□□□ -2.24
EPHA4P54764 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
EPHA4P54764 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
EPHA4P54764 Y_RNA.375-201ENST00000365625 101 ntBASIC1.05□□□□□ -2.24
EPHA4P54764 RNY1P8-201ENST00000383970 114 ntBASIC1.05□□□□□ -2.24
EPHA4P54764 RNU6-656P-201ENST00000516785 107 ntBASIC1.05□□□□□ -2.24
EPHA4P54764 MIR4752-201ENST00000579672 72 ntBASIC1.05□□□□□ -2.24
EPHA4P54764 MIR4452-201ENST00000583004 71 ntBASIC1.05□□□□□ -2.24
EPHA4P54764 SNORA70.25-201ENST00000612741 95 ntBASIC1.05□□□□□ -2.24
EPHA4P54764 Y_RNA.224-201ENST00000364308 111 ntBASIC1.04□□□□□ -2.24
EPHA4P54764 RNU6-302P-201ENST00000365249 107 ntBASIC1.04□□□□□ -2.24
EPHA4P54764 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
EPHA4P54764 SNORA25.18-201ENST00000607153 114 ntBASIC1.04□□□□□ -2.24
EPHA4P54764 MIR96-201ENST00000362288 78 ntBASIC1.03□□□□□ -2.24
EPHA4P54764 RNU1-93P-201ENST00000364704 169 ntBASIC1.03□□□□□ -2.24
EPHA4P54764 MIR548C-201ENST00000384815 97 ntBASIC1.03□□□□□ -2.24
EPHA4P54764 snoU13.13-201ENST00000458842 104 ntBASIC1.03□□□□□ -2.24
EPHA4P54764 SNORA40.17-201ENST00000517256 115 ntBASIC1.03□□□□□ -2.24
EPHA4P54764 MIR548AE1-201ENST00000583292 70 ntBASIC1.03□□□□□ -2.24
EPHA4P54764 AL109933.3-201ENST00000619095 188 ntBASIC1.03□□□□□ -2.24
EPHA4P54764 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.03□□□□□ -2.24
EPHA4P54764 Y_RNA.118-201ENST00000363300 101 ntBASIC1.02□□□□□ -2.25
EPHA4P54764 SNORD114-22-201ENST00000365423 72 ntBASIC1.02□□□□□ -2.25
EPHA4P54764 SNORA2A-201ENST00000383885 135 ntBASIC1.02□□□□□ -2.25
EPHA4P54764 AC069271.1-201ENST00000445577 156 ntBASIC1.02□□□□□ -2.25
EPHA4P54764 snoU13.18-201ENST00000459483 104 ntBASIC1.02□□□□□ -2.25
EPHA4P54764 ACA64.5-201ENST00000516207 127 ntBASIC1.02□□□□□ -2.25
EPHA4P54764 RNU6-1089P-201ENST00000516473 104 ntBASIC1.02□□□□□ -2.25
EPHA4P54764 SNORD118-201ENST00000363593 134 ntBASIC1.01□□□□□ -2.25
EPHA4P54764 AL590095.2-201ENST00000604136 117 ntBASIC1.01□□□□□ -2.25
EPHA4P54764 AC211469.2-201ENST00000605461 205 ntBASIC1.01□□□□□ -2.25
EPHA4P54764 MIR489-201ENST00000384923 84 ntBASIC1□□□□□ -2.25
EPHA4P54764 RNU6-229P-201ENST00000516614 102 ntBASIC1□□□□□ -2.25
EPHA4P54764 MIR20A-201ENST00000362279 71 ntBASIC0.99□□□□□ -2.25
EPHA4P54764 SNORD114-27-201ENST00000363766 70 ntBASIC0.99□□□□□ -2.25
EPHA4P54764 MIR9-2-201ENST00000384838 87 ntBASIC0.99□□□□□ -2.25
EPHA4P54764 SNORD2-201ENST00000459163 69 ntBASIC0.99□□□□□ -2.25
EPHA4P54764 SNORD114-21-201ENST00000606412 72 ntBASIC0.99□□□□□ -2.25
EPHA4P54764 Y_RNA.125-201ENST00000363371 111 ntBASIC0.98□□□□□ -2.25
EPHA4P54764 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
EPHA4P54764 RNA5SP299-201ENST00000391203 116 ntBASIC0.98□□□□□ -2.25
EPHA4P54764 HMGN2P22-201ENST00000427588 175 ntBASIC0.98□□□□□ -2.25
EPHA4P54764 AC244090.1-201ENST00000441884 93 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 294.5 ms