Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.64□□□□□ -2.31
MMP13P45452 RNU6-70P-201ENST00000516438 60 ntBASIC0.64□□□□□ -2.31
MMP13P45452 MIR4460-201ENST00000577862 86 ntBASIC0.64□□□□□ -2.31
MMP13P45452 MIR548AE1-201ENST00000583292 70 ntBASIC0.64□□□□□ -2.31
MMP13P45452 MIR1297-201ENST00000637311 77 ntBASIC0.64□□□□□ -2.31
MMP13P45452 MIR203A-201ENST00000384836 110 ntBASIC0.63□□□□□ -2.31
MMP13P45452 RNU7-24P-201ENST00000458867 62 ntBASIC0.63□□□□□ -2.31
MMP13P45452 RNA5SP220-201ENST00000516298 104 ntBASIC0.63□□□□□ -2.31
MMP13P45452 RNU6-1232P-201ENST00000516299 86 ntBASIC0.63□□□□□ -2.31
MMP13P45452 RNU6-807P-201ENST00000516805 107 ntBASIC0.63□□□□□ -2.31
MMP13P45452 MIR4714-201ENST00000580728 77 ntBASIC0.63□□□□□ -2.31
MMP13P45452 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.63□□□□□ -2.31
MMP13P45452 SNORD118-201ENST00000363593 134 ntBASIC0.62□□□□□ -2.31
MMP13P45452 RNU6-990P-201ENST00000364385 104 ntBASIC0.62□□□□□ -2.31
MMP13P45452 RNU7-74P-201ENST00000459104 62 ntBASIC0.62□□□□□ -2.31
MMP13P45452 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
MMP13P45452 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.61□□□□□ -2.31
MMP13P45452 SNORD115-31-201ENST00000365318 82 ntBASIC0.61□□□□□ -2.31
MMP13P45452 MIR92A1-201ENST00000385233 78 ntBASIC0.61□□□□□ -2.31
MMP13P45452 MIR6755-201ENST00000619993 66 ntBASIC0.61□□□□□ -2.31
MMP13P45452 RNU6-1039P-201ENST00000383931 107 ntBASIC0.6□□□□□ -2.31
MMP13P45452 RNU6-1241P-201ENST00000384536 107 ntBASIC0.6□□□□□ -2.31
MMP13P45452 Y_RNA.545-201ENST00000384652 105 ntBASIC0.6□□□□□ -2.31
MMP13P45452 MIR216B-201ENST00000390186 82 ntBASIC0.6□□□□□ -2.31
MMP13P45452 HMGN2P22-201ENST00000427588 175 ntBASIC0.6□□□□□ -2.31
MMP13P45452 MIR3675-201ENST00000583661 73 ntBASIC0.6□□□□□ -2.31
MMP13P45452 AC069503.3-201ENST00000618674 145 ntBASIC0.6□□□□□ -2.31
MMP13P45452 AC092634.7-201ENST00000621022 103 ntBASIC0.6□□□□□ -2.31
MMP13P45452 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
MMP13P45452 RNU6-42P-201ENST00000384165 107 ntBASIC0.59□□□□□ -2.31
MMP13P45452 RNU6-411P-201ENST00000384451 107 ntBASIC0.59□□□□□ -2.31
MMP13P45452 RNU6-380P-201ENST00000410207 107 ntBASIC0.59□□□□□ -2.31
MMP13P45452 RNU6-274P-201ENST00000459566 107 ntBASIC0.59□□□□□ -2.31
MMP13P45452 MIR4473-201ENST00000583731 91 ntBASIC0.59□□□□□ -2.31
MMP13P45452 MIR6734-201ENST00000621166 68 ntBASIC0.59□□□□□ -2.31
MMP13P45452 RNU6-681P-201ENST00000364012 104 ntBASIC0.58□□□□□ -2.32
MMP13P45452 SNORD115-22-201ENST00000364456 82 ntBASIC0.58□□□□□ -2.32
MMP13P45452 MIR518A1-201ENST00000385068 85 ntBASIC0.58□□□□□ -2.32
MMP13P45452 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
MMP13P45452 RNU6-587P-201ENST00000391282 106 ntBASIC0.58□□□□□ -2.32
MMP13P45452 SNORD110-201ENST00000408189 75 ntBASIC0.58□□□□□ -2.32
MMP13P45452 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.58□□□□□ -2.32
MMP13P45452 AL691482.2-201ENST00000457453 84 ntBASIC0.58□□□□□ -2.32
MMP13P45452 RNA5SP121-201ENST00000516537 101 ntBASIC0.58□□□□□ -2.32
MMP13P45452 RNU6-1223P-201ENST00000517124 104 ntBASIC0.58□□□□□ -2.32
MMP13P45452 MIR5000-201ENST00000577717 103 ntBASIC0.58□□□□□ -2.32
MMP13P45452 MIR6509-201ENST00000614603 85 ntBASIC0.58□□□□□ -2.32
MMP13P45452 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.58□□□□□ -2.32
MMP13P45452 MIR652-201ENST00000385278 98 ntBASIC0.57□□□□□ -2.32
MMP13P45452 SNORA40.8-201ENST00000411034 126 ntBASIC0.57□□□□□ -2.32
MMP13P45452 AC006210.1-201ENST00000424882 111 ntBASIC0.57□□□□□ -2.32
MMP13P45452 Y_RNA.681-201ENST00000516445 113 ntBASIC0.57□□□□□ -2.32
MMP13P45452 MIR3657-201ENST00000584818 117 ntBASIC0.57□□□□□ -2.32
MMP13P45452 MIR582-201ENST00000365731 98 ntBASIC0.56□□□□□ -2.32
MMP13P45452 SNORD45A-201ENST00000384512 84 ntBASIC0.56□□□□□ -2.32
MMP13P45452 RNU6-540P-201ENST00000384622 101 ntBASIC0.56□□□□□ -2.32
MMP13P45452 RNU6-604P-201ENST00000390917 100 ntBASIC0.56□□□□□ -2.32
MMP13P45452 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
MMP13P45452 AC073869.9-201ENST00000641610 120 ntBASIC0.56□□□□□ -2.32
MMP13P45452 SNORD45.1-201ENST00000363181 77 ntBASIC0.55□□□□□ -2.32
MMP13P45452 RNU6-945P-201ENST00000383947 107 ntBASIC0.55□□□□□ -2.32
MMP13P45452 AC098934.3-201ENST00000430450 190 ntBASIC0.55□□□□□ -2.32
MMP13P45452 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
MMP13P45452 RNU6-634P-201ENST00000459134 106 ntBASIC0.55□□□□□ -2.32
MMP13P45452 Y_RNA.423-201ENST00000384057 113 ntBASIC0.54□□□□□ -2.32
MMP13P45452 RNU6-982P-201ENST00000516216 102 ntBASIC0.54□□□□□ -2.32
MMP13P45452 RNU6-752P-201ENST00000516376 102 ntBASIC0.54□□□□□ -2.32
MMP13P45452 RNA5SP147-201ENST00000516493 109 ntBASIC0.54□□□□□ -2.32
MMP13P45452 RNU6-260P-201ENST00000384092 107 ntBASIC0.53□□□□□ -2.32
MMP13P45452 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.53□□□□□ -2.32
MMP13P45452 snoU13.13-201ENST00000458842 104 ntBASIC0.53□□□□□ -2.32
MMP13P45452 snoU13.18-201ENST00000459483 104 ntBASIC0.53□□□□□ -2.32
MMP13P45452 AC139453.2-201ENST00000487255 133 ntBASIC0.53□□□□□ -2.32
MMP13P45452 SNORA68.3-201ENST00000515906 83 ntBASIC0.53□□□□□ -2.32
MMP13P45452 uc_338.17-201ENST00000619633 179 ntBASIC0.53□□□□□ -2.32
MMP13P45452 RNA5SP347-201ENST00000362445 119 ntBASIC0.52□□□□□ -2.33
MMP13P45452 SNORD44.1-201ENST00000363202 61 ntBASIC0.52□□□□□ -2.33
MMP13P45452 RNA5SP499-201ENST00000363982 119 ntBASIC0.52□□□□□ -2.33
MMP13P45452 MIR501-201ENST00000390204 84 ntBASIC0.52□□□□□ -2.33
MMP13P45452 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.51□□□□□ -2.33
MMP13P45452 MIR103A1-201ENST00000362165 78 ntBASIC0.51□□□□□ -2.33
MMP13P45452 Y_RNA.407-201ENST00000383986 113 ntBASIC0.51□□□□□ -2.33
MMP13P45452 SNORD116-24-201ENST00000384549 92 ntBASIC0.51□□□□□ -2.33
MMP13P45452 MIR154-201ENST00000385243 84 ntBASIC0.51□□□□□ -2.33
MMP13P45452 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.51□□□□□ -2.33
MMP13P45452 MIR548E-201ENST00000408287 88 ntBASIC0.51□□□□□ -2.33
MMP13P45452 RNU6-863P-201ENST00000515989 104 ntBASIC0.51□□□□□ -2.33
MMP13P45452 SNORD113.1-201ENST00000363280 73 ntBASIC0.5□□□□□ -2.33
MMP13P45452 Y_RNA.125-201ENST00000363371 111 ntBASIC0.5□□□□□ -2.33
MMP13P45452 Y_RNA.355-201ENST00000365462 98 ntBASIC0.5□□□□□ -2.33
MMP13P45452 AC114801.3-201ENST00000510231 177 ntBASIC0.49□□□□□ -2.33
MMP13P45452 SCARNA17.3-201ENST00000516381 125 ntBASIC0.49□□□□□ -2.33
MMP13P45452 AL109933.3-201ENST00000619095 188 ntBASIC0.49□□□□□ -2.33
MMP13P45452 SNORA2.1-201ENST00000363089 137 ntBASIC0.48□□□□□ -2.33
MMP13P45452 SNORA2A-201ENST00000383885 135 ntBASIC0.48□□□□□ -2.33
MMP13P45452 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
MMP13P45452 RNU6-881P-201ENST00000516813 102 ntBASIC0.48□□□□□ -2.33
MMP13P45452 MIR5706-201ENST00000579841 80 ntBASIC0.48□□□□□ -2.33
MMP13P45452 AC022709.1-201ENST00000615967 87 ntBASIC0.48□□□□□ -2.33
MMP13P45452 Y_RNA.386-201ENST00000383913 105 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 175.8 ms