Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.44□□□□□ -2.64
RFC3P40938 MIR568-201ENST00000385036 95 ntBASIC-1.44□□□□□ -2.64
RFC3P40938 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.44□□□□□ -2.64
RFC3P40938 SNORA81.3-201ENST00000517283 198 ntBASIC-1.44□□□□□ -2.64
RFC3P40938 SNORA63.2-201ENST00000362603 126 ntBASIC-1.45□□□□□ -2.64
RFC3P40938 RNU6-151P-201ENST00000364158 107 ntBASIC-1.45□□□□□ -2.64
RFC3P40938 AL158147.1-201ENST00000443970 75 ntBASIC-1.45□□□□□ -2.64
RFC3P40938 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.45□□□□□ -2.64
RFC3P40938 RNU6-990P-201ENST00000364385 104 ntBASIC-1.46□□□□□ -2.64
RFC3P40938 RNA5SP272-201ENST00000516095 111 ntBASIC-1.46□□□□□ -2.64
RFC3P40938 RNU6-781P-201ENST00000516377 101 ntBASIC-1.46□□□□□ -2.64
RFC3P40938 U6.96-201ENST00000636425 70 ntBASIC-1.46□□□□□ -2.64
RFC3P40938 MIR527-201ENST00000385244 85 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 MIR513C-201ENST00000401352 84 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.47□□□□□ -2.64
RFC3P40938 RNU7-85P-201ENST00000458851 63 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 YWHAEP3-201ENST00000582767 121 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.47□□□□□ -2.64
RFC3P40938 Y_RNA.543-201ENST00000384649 107 ntBASIC-1.48□□□□□ -2.65
RFC3P40938 MIR577-201ENST00000385196 96 ntBASIC-1.48□□□□□ -2.65
RFC3P40938 MIR6502-201ENST00000617296 76 ntBASIC-1.48□□□□□ -2.65
RFC3P40938 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.49□□□□□ -2.65
RFC3P40938 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.49□□□□□ -2.65
RFC3P40938 AC068339.1-201ENST00000526965 141 ntBASIC-1.49□□□□□ -2.65
RFC3P40938 MIR3140-201ENST00000583685 90 ntBASIC-1.49□□□□□ -2.65
RFC3P40938 AL445584.3-201ENST00000617173 78 ntBASIC-1.49□□□□□ -2.65
RFC3P40938 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 RNU6-132P-201ENST00000383863 107 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 MIR548U-201ENST00000390728 81 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
RFC3P40938 RNU2-51P-201ENST00000410708 197 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 Y_RNA.616-201ENST00000410835 95 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 RNU7-24P-201ENST00000458867 62 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 RNU6-983P-201ENST00000516004 103 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 RNU6-412P-201ENST00000516434 106 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 AL513043.2-201ENST00000573941 143 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 MIR4694-201ENST00000578534 80 ntBASIC-1.5□□□□□ -2.65
RFC3P40938 SNORA63-201ENST00000363450 132 ntBASIC-1.51□□□□□ -2.65
RFC3P40938 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.51□□□□□ -2.65
RFC3P40938 RNU6-861P-201ENST00000516745 106 ntBASIC-1.51□□□□□ -2.65
RFC3P40938 MIR4464-201ENST00000580818 92 ntBASIC-1.51□□□□□ -2.65
RFC3P40938 AL353803.5-201ENST00000599815 141 ntBASIC-1.51□□□□□ -2.65
RFC3P40938 U7.2-201ENST00000607576 63 ntBASIC-1.51□□□□□ -2.65
RFC3P40938 AC090617.8-201ENST00000623339 167 ntBASIC-1.51□□□□□ -2.65
RFC3P40938 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.51□□□□□ -2.65
RFC3P40938 Y_RNA.55-201ENST00000362797 102 ntBASIC-1.52□□□□□ -2.65
RFC3P40938 SNORA24B-201ENST00000384176 131 ntBASIC-1.52□□□□□ -2.65
RFC3P40938 RNU7-120P-201ENST00000459334 63 ntBASIC-1.52□□□□□ -2.65
RFC3P40938 AC025166.1-201ENST00000612411 163 ntBASIC-1.52□□□□□ -2.65
RFC3P40938 U4.2-201ENST00000618561 85 ntBASIC-1.52□□□□□ -2.65
RFC3P40938 SNORA2.1-201ENST00000363089 137 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 RNU6-576P-201ENST00000390854 102 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 RNA5SP86-201ENST00000390869 98 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 Y_RNA.580-201ENST00000391004 95 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 RNU6-1177P-201ENST00000391058 104 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 SNORD75.2-201ENST00000408784 58 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 MIR3064-201ENST00000581130 66 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 MIR4439-201ENST00000583746 80 ntBASIC-1.53□□□□□ -2.65
RFC3P40938 RNU6-832P-201ENST00000363319 107 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 SNORD18.1-201ENST00000363807 70 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 RNU6-682P-201ENST00000363843 106 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 Y_RNA.309-201ENST00000365046 111 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 Y_RNA.420-201ENST00000384043 110 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 RNU6-746P-201ENST00000384112 109 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 RNU4-61P-201ENST00000411243 107 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 Y_RNA.633-201ENST00000459107 95 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 MIR6818-201ENST00000621576 65 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 MIR6888-201ENST00000621977 67 ntBASIC-1.54□□□□□ -2.66
RFC3P40938 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.54□□□□□ -2.66
RFC3P40938 Y_RNA.193-201ENST00000363979 102 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 MIR548X2-201ENST00000579776 100 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-1.55□□□□□ -2.66
RFC3P40938 AC104996.3-201ENST00000590718 94 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 AC091912.2-201ENST00000624798 167 ntBASIC-1.55□□□□□ -2.66
RFC3P40938 RNY3P2-201ENST00000362918 102 ntBASIC-1.56□□□□□ -2.66
RFC3P40938 SNORD58C-201ENST00000365223 64 ntBASIC-1.56□□□□□ -2.66
RFC3P40938 RNU6-1051P-201ENST00000365471 102 ntBASIC-1.57□□□□□ -2.66
RFC3P40938 MIR29B1-201ENST00000385015 81 ntBASIC-1.57□□□□□ -2.66
RFC3P40938 MIR548A1-201ENST00000385041 97 ntBASIC-1.57□□□□□ -2.66
RFC3P40938 RNU6-644P-201ENST00000391155 98 ntBASIC-1.57□□□□□ -2.66
RFC3P40938 AL118496.2-201ENST00000448300 230 ntBASIC-1.57□□□□□ -2.66
RFC3P40938 SNORD63.1-201ENST00000516178 80 ntBASIC-1.57□□□□□ -2.66
RFC3P40938 MIR6874-201ENST00000635894 71 ntBASIC-1.57□□□□□ -2.66
RFC3P40938 MIR548H1-201ENST00000408610 102 ntBASIC-1.58□□□□□ -2.66
RFC3P40938 MIR4679-2-201ENST00000578358 77 ntBASIC-1.58□□□□□ -2.66
RFC3P40938 SNORD114-3-201ENST00000364969 75 ntBASIC-1.59□□□□□ -2.66
RFC3P40938 Y_RNA.491-201ENST00000384417 107 ntBASIC-1.59□□□□□ -2.66
RFC3P40938 SNORD4B-201ENST00000459083 72 ntBASIC-1.59□□□□□ -2.66
RFC3P40938 RNA5SP147-201ENST00000516493 109 ntBASIC-1.59□□□□□ -2.66
RFC3P40938 RNU6-1061P-201ENST00000516530 99 ntBASIC-1.59□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 299 ms