Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.24
GDNFP39905 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.08□□□□□ -2.24
GDNFP39905 RNA5SP192-201ENST00000364404 120 ntBASIC1.08□□□□□ -2.24
GDNFP39905 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
GDNFP39905 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
GDNFP39905 MIR1285-1-201ENST00000408593 84 ntBASIC1.08□□□□□ -2.24
GDNFP39905 RNA5SP268-201ENST00000516828 124 ntBASIC1.08□□□□□ -2.24
GDNFP39905 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.08□□□□□ -2.24
GDNFP39905 MIR4421-201ENST00000578133 69 ntBASIC1.08□□□□□ -2.24
GDNFP39905 SNORA25.5-201ENST00000363782 126 ntBASIC1.07□□□□□ -2.24
GDNFP39905 RNU1-124P-201ENST00000363861 145 ntBASIC1.07□□□□□ -2.24
GDNFP39905 RNU6-1162P-201ENST00000384443 104 ntBASIC1.07□□□□□ -2.24
GDNFP39905 SCARNA21.1-201ENST00000515996 128 ntBASIC1.07□□□□□ -2.24
GDNFP39905 MIR548V-201ENST00000584165 80 ntBASIC1.07□□□□□ -2.24
GDNFP39905 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.07□□□□□ -2.24
GDNFP39905 MIR548C-201ENST00000384815 97 ntBASIC1.06□□□□□ -2.24
GDNFP39905 MIR652-201ENST00000385278 98 ntBASIC1.06□□□□□ -2.24
GDNFP39905 AL157398.1-201ENST00000452981 186 ntBASIC1.06□□□□□ -2.24
GDNFP39905 TRMT112P2-201ENST00000512910 132 ntBASIC1.06□□□□□ -2.24
GDNFP39905 Y_RNA.676-201ENST00000516393 96 ntBASIC1.06□□□□□ -2.24
GDNFP39905 MIR4473-201ENST00000583731 91 ntBASIC1.06□□□□□ -2.24
GDNFP39905 RNA5SP215-201ENST00000363440 122 ntBASIC1.05□□□□□ -2.24
GDNFP39905 RNU6-321P-201ENST00000410912 106 ntBASIC1.05□□□□□ -2.24
GDNFP39905 AC006210.1-201ENST00000424882 111 ntBASIC1.05□□□□□ -2.24
GDNFP39905 AC079150.2-201ENST00000443733 78 ntBASIC1.05□□□□□ -2.24
GDNFP39905 AC021146.9-201ENST00000512503 156 ntBASIC1.05□□□□□ -2.24
GDNFP39905 RNA5SP94-201ENST00000516917 108 ntBASIC1.05□□□□□ -2.24
GDNFP39905 MIR548AE1-201ENST00000583292 70 ntBASIC1.05□□□□□ -2.24
GDNFP39905 MIR3660-201ENST00000584845 100 ntBASIC1.05□□□□□ -2.24
GDNFP39905 MIR7107-201ENST00000611489 80 ntBASIC1.05□□□□□ -2.24
GDNFP39905 Y_RNA.250-201ENST00000364542 110 ntBASIC1.04□□□□□ -2.24
GDNFP39905 Y_RNA.407-201ENST00000383986 113 ntBASIC1.04□□□□□ -2.24
GDNFP39905 MIR521-2-201ENST00000384818 87 ntBASIC1.04□□□□□ -2.24
GDNFP39905 SNORD110-201ENST00000408189 75 ntBASIC1.04□□□□□ -2.24
GDNFP39905 RNA5SP222-201ENST00000411039 105 ntBASIC1.04□□□□□ -2.24
GDNFP39905 MIR466-201ENST00000580653 84 ntBASIC1.04□□□□□ -2.24
GDNFP39905 Y_RNA.327-201ENST00000365201 102 ntBASIC1.03□□□□□ -2.24
GDNFP39905 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.03□□□□□ -2.24
GDNFP39905 OR2A41P-201ENST00000473586 105 ntBASIC1.03□□□□□ -2.24
GDNFP39905 SCARNA17.3-201ENST00000516381 125 ntBASIC1.03□□□□□ -2.24
GDNFP39905 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
GDNFP39905 RNU6-1079P-201ENST00000362861 110 ntBASIC1.02□□□□□ -2.25
GDNFP39905 MIR4752-201ENST00000579672 72 ntBASIC1.02□□□□□ -2.25
GDNFP39905 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.01□□□□□ -2.25
GDNFP39905 RNU6-940P-201ENST00000363433 104 ntBASIC1.01□□□□□ -2.25
GDNFP39905 Y_RNA.164-201ENST00000363709 102 ntBASIC1.01□□□□□ -2.25
GDNFP39905 RNU6-392P-201ENST00000364926 101 ntBASIC1.01□□□□□ -2.25
GDNFP39905 SNORA33.1-201ENST00000364957 130 ntBASIC1.01□□□□□ -2.25
GDNFP39905 MIR582-201ENST00000365731 98 ntBASIC1.01□□□□□ -2.25
GDNFP39905 RNU6-614P-201ENST00000384369 107 ntBASIC1.01□□□□□ -2.25
GDNFP39905 MIR630-201ENST00000384957 97 ntBASIC1.01□□□□□ -2.25
GDNFP39905 SNORA70.25-201ENST00000612741 95 ntBASIC1.01□□□□□ -2.25
GDNFP39905 U6.59-201ENST00000615686 107 ntBASIC1.01□□□□□ -2.25
GDNFP39905 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.01□□□□□ -2.25
GDNFP39905 RNU6-829P-201ENST00000363700 112 ntBASIC1□□□□□ -2.25
GDNFP39905 RNU4-45P-201ENST00000365469 141 ntBASIC1□□□□□ -2.25
GDNFP39905 SNORA63.6-201ENST00000364921 119 ntBASIC0.99□□□□□ -2.25
GDNFP39905 RNY1P8-201ENST00000383970 114 ntBASIC0.99□□□□□ -2.25
GDNFP39905 SNORA75.1-201ENST00000391130 148 ntBASIC0.99□□□□□ -2.25
GDNFP39905 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.99□□□□□ -2.25
GDNFP39905 Y_RNA.633-201ENST00000459107 95 ntBASIC0.99□□□□□ -2.25
GDNFP39905 RNU6-302P-201ENST00000365249 107 ntBASIC0.98□□□□□ -2.25
GDNFP39905 SNORA15B-2-201ENST00000384058 135 ntBASIC0.98□□□□□ -2.25
GDNFP39905 SNORA15B-1-201ENST00000384334 135 ntBASIC0.98□□□□□ -2.25
GDNFP39905 MIR548E-201ENST00000408287 88 ntBASIC0.98□□□□□ -2.25
GDNFP39905 AL353765.1-201ENST00000605514 183 ntBASIC0.98□□□□□ -2.25
GDNFP39905 RNU6-92P-201ENST00000605893 104 ntBASIC0.98□□□□□ -2.25
GDNFP39905 MIR6078-201ENST00000611069 100 ntBASIC0.98□□□□□ -2.25
GDNFP39905 Y_RNA.125-201ENST00000363371 111 ntBASIC0.97□□□□□ -2.25
GDNFP39905 SNORA36.2-201ENST00000384004 127 ntBASIC0.97□□□□□ -2.25
GDNFP39905 U2.7-201ENST00000619197 100 ntBASIC0.97□□□□□ -2.25
GDNFP39905 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.96□□□□□ -2.26
GDNFP39905 MIR517B-201ENST00000385102 67 ntBASIC0.96□□□□□ -2.26
GDNFP39905 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.96□□□□□ -2.26
GDNFP39905 HMGN2P22-201ENST00000427588 175 ntBASIC0.95□□□□□ -2.26
GDNFP39905 AC069271.1-201ENST00000445577 156 ntBASIC0.95□□□□□ -2.26
GDNFP39905 RNU7-174P-201ENST00000516248 59 ntBASIC0.95□□□□□ -2.26
GDNFP39905 uc_338.10-201ENST00000621872 182 ntBASIC0.95□□□□□ -2.26
GDNFP39905 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
GDNFP39905 Y_RNA.236-201ENST00000364427 111 ntBASIC0.94□□□□□ -2.26
GDNFP39905 RNA5SP517-201ENST00000364724 117 ntBASIC0.94□□□□□ -2.26
GDNFP39905 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.94□□□□□ -2.26
GDNFP39905 RNU6-122P-201ENST00000516818 107 ntBASIC0.94□□□□□ -2.26
GDNFP39905 AC103810.9-201ENST00000606688 112 ntBASIC0.94□□□□□ -2.26
GDNFP39905 SNORD60.1-201ENST00000362451 73 ntBASIC0.93□□□□□ -2.26
GDNFP39905 RNU6-446P-201ENST00000362827 106 ntBASIC0.93□□□□□ -2.26
GDNFP39905 RNA5SP247-201ENST00000411181 105 ntBASIC0.93□□□□□ -2.26
GDNFP39905 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.93□□□□□ -2.26
GDNFP39905 RNU1-29P-201ENST00000606574 126 ntBASIC0.93□□□□□ -2.26
GDNFP39905 SNORA25.18-201ENST00000607153 114 ntBASIC0.93□□□□□ -2.26
GDNFP39905 MIR8070-201ENST00000616510 88 ntBASIC0.93□□□□□ -2.26
GDNFP39905 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC0.92□□□□□ -2.26
GDNFP39905 RNU6-141P-201ENST00000410499 105 ntBASIC0.92□□□□□ -2.26
GDNFP39905 ACA64.5-201ENST00000516207 127 ntBASIC0.92□□□□□ -2.26
GDNFP39905 U4.4-201ENST00000620626 117 ntBASIC0.92□□□□□ -2.26
GDNFP39905 RNU6-698P-201ENST00000363523 107 ntBASIC0.91□□□□□ -2.26
GDNFP39905 RNU6-34P-201ENST00000364874 107 ntBASIC0.91□□□□□ -2.26
GDNFP39905 MIR499A-201ENST00000384903 122 ntBASIC0.91□□□□□ -2.26
GDNFP39905 SNORD113-2-201ENST00000391082 72 ntBASIC0.91□□□□□ -2.26
GDNFP39905 MIR3938-201ENST00000582157 103 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 211.1 ms