Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RNU7-104P-201ENST00000459398 79 ntBASIC0.71□□□□□ -2.3
HOXC13P31276 RNU7-161P-201ENST00000517289 62 ntBASIC0.71□□□□□ -2.3
HOXC13P31276 MIR548AG2-201ENST00000581228 64 ntBASIC0.71□□□□□ -2.3
HOXC13P31276 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.71□□□□□ -2.3
HOXC13P31276 uc_338.16-201ENST00000621804 95 ntBASIC0.71□□□□□ -2.3
HOXC13P31276 U6.111-201ENST00000636093 83 ntBASIC0.71□□□□□ -2.3
HOXC13P31276 SNORD114-23-201ENST00000363536 72 ntBASIC0.7□□□□□ -2.3
HOXC13P31276 RNU6-895P-201ENST00000384125 103 ntBASIC0.7□□□□□ -2.3
HOXC13P31276 MIR644A-201ENST00000385262 94 ntBASIC0.7□□□□□ -2.3
HOXC13P31276 MIR1265-201ENST00000408444 86 ntBASIC0.7□□□□□ -2.3
HOXC13P31276 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.7□□□□□ -2.3
HOXC13P31276 MIR1827-201ENST00000408549 66 ntBASIC0.7□□□□□ -2.3
HOXC13P31276 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
HOXC13P31276 SNORD115-22-201ENST00000364456 82 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 SNORD115-44-201ENST00000365391 82 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.69□□□□□ -2.3
HOXC13P31276 SNORD105-201ENST00000386910 85 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 RNU6-604P-201ENST00000390917 100 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 RNU6-630P-201ENST00000391258 106 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 RNU6-274P-201ENST00000459566 107 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 MIR3920-201ENST00000581751 86 ntBASIC0.69□□□□□ -2.3
HOXC13P31276 RNA5SP403-201ENST00000363598 108 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 RNU6-1126P-201ENST00000384002 107 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 MIR203A-201ENST00000384836 110 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 MIR1197-201ENST00000408818 88 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 AC244098.3-201ENST00000424803 96 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 AL691482.2-201ENST00000457453 84 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 RNU6-881P-201ENST00000516813 102 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 NAMPTP3-201ENST00000569273 224 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 MIR2909-201ENST00000617113 69 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 AL109933.3-201ENST00000619095 188 ntBASIC0.68□□□□□ -2.3
HOXC13P31276 SNORD113.1-201ENST00000363280 73 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 RNA5SP457-201ENST00000363657 124 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 Y_RNA.174-201ENST00000363781 105 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 RNA5SP117-201ENST00000365294 118 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 U3.27-201ENST00000391237 200 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 AC002350.1-201ENST00000490759 375 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 AC011195.1-201ENST00000578177 177 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 AC005520.4-201ENST00000604337 90 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 AC067863.3-201ENST00000624172 122 ntBASIC0.67□□□□□ -2.3
HOXC13P31276 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
HOXC13P31276 Y_RNA.178-201ENST00000363832 102 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 RNU6-54P-201ENST00000365563 107 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 MIR9-2-201ENST00000384838 87 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 MIR617-201ENST00000385030 97 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 MIR519E-201ENST00000385075 84 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 RNU6-982P-201ENST00000516216 102 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 RNU4-54P-201ENST00000516428 129 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 RNU6-229P-201ENST00000516614 102 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 MIR8053-201ENST00000613344 75 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 AC010487.4-201ENST00000637027 61 ntBASIC0.66□□□□□ -2.3
HOXC13P31276 RNU6-1216P-201ENST00000362590 107 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 RNU6-495P-201ENST00000362995 107 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 Y_RNA.443-201ENST00000384135 111 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 SNORD116-24-201ENST00000384549 92 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 MIR548L-201ENST00000408303 86 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 MIR6509-201ENST00000614603 85 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 AC244669.1-204ENST00000621564 178 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 AC243829.3-201ENST00000622177 108 ntBASIC0.65□□□□□ -2.31
HOXC13P31276 RNU6-716P-201ENST00000365621 103 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 RNU6-1039P-201ENST00000383931 107 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 RNU6V-201ENST00000384105 107 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 SNORD28-201ENST00000384706 75 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 SNORD75.2-201ENST00000408784 58 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 AC093423.1-201ENST00000440817 142 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 RNU6-469P-201ENST00000516253 101 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 MIR548O2-201ENST00000616090 70 ntBASIC0.64□□□□□ -2.31
HOXC13P31276 RNU6-471P-201ENST00000383944 106 ntBASIC0.63□□□□□ -2.31
HOXC13P31276 RNA5SP222-201ENST00000411039 105 ntBASIC0.63□□□□□ -2.31
HOXC13P31276 SNORD42B-201ENST00000458893 67 ntBASIC0.63□□□□□ -2.31
HOXC13P31276 RNU6-752P-201ENST00000516376 102 ntBASIC0.63□□□□□ -2.31
HOXC13P31276 RNA5SP147-201ENST00000516493 109 ntBASIC0.63□□□□□ -2.31
HOXC13P31276 MIR8087-201ENST00000612745 78 ntBASIC0.63□□□□□ -2.31
HOXC13P31276 MIR924-201ENST00000638017 53 ntBASIC0.63□□□□□ -2.31
HOXC13P31276 SNORA25.4-201ENST00000363666 124 ntBASIC0.62□□□□□ -2.31
HOXC13P31276 MIR3678-201ENST00000578455 94 ntBASIC0.62□□□□□ -2.31
HOXC13P31276 MIR3612-201ENST00000579753 87 ntBASIC0.62□□□□□ -2.31
HOXC13P31276 MIR4639-201ENST00000584938 69 ntBASIC0.62□□□□□ -2.31
HOXC13P31276 RNA5SP347-201ENST00000362445 119 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 SNORD18A-201ENST00000363753 72 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 RNU6-990P-201ENST00000364385 104 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 RNU6-726P-201ENST00000364680 107 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 RNU6-260P-201ENST00000384092 107 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 MIR216B-201ENST00000390186 82 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 RNU7-24P-201ENST00000458867 62 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 RNU5B-6P-201ENST00000516765 68 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 MIR4460-201ENST00000577862 86 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 MIR3657-201ENST00000584818 117 ntBASIC0.61□□□□□ -2.31
HOXC13P31276 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.6□□□□□ -2.31
HOXC13P31276 SNORA36.2-201ENST00000384004 127 ntBASIC0.6□□□□□ -2.31
HOXC13P31276 SNORD41.1-201ENST00000391000 69 ntBASIC0.6□□□□□ -2.31
HOXC13P31276 RNA5SP47-201ENST00000517230 109 ntBASIC0.6□□□□□ -2.31
HOXC13P31276 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.59□□□□□ -2.31
HOXC13P31276 RNU6-668P-201ENST00000364180 107 ntBASIC0.59□□□□□ -2.31
HOXC13P31276 RNU1-141P-201ENST00000364623 158 ntBASIC0.59□□□□□ -2.31
HOXC13P31276 MIR573-201ENST00000384964 99 ntBASIC0.59□□□□□ -2.31
HOXC13P31276 RNU6-269P-201ENST00000391077 97 ntBASIC0.59□□□□□ -2.31
HOXC13P31276 MTND4LP1-201ENST00000446263 157 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms