Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 MTATP6P29-201ENST00000415057 132 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 SNORD63.2-201ENST00000516303 64 ntBASIC-4.13□□□□□ -3.07
HMGA1P17096 SNORD113-8-201ENST00000363497 74 ntBASIC-4.14□□□□□ -3.07
HMGA1P17096 AF246928.1-201ENST00000623768 87 ntBASIC-4.14□□□□□ -3.07
HMGA1P17096 RNU6-1090P-201ENST00000364065 94 ntBASIC-4.15□□□□□ -3.07
HMGA1P17096 Y_RNA.237-201ENST00000364439 102 ntBASIC-4.15□□□□□ -3.07
HMGA1P17096 MIR513B-201ENST00000385136 84 ntBASIC-4.15□□□□□ -3.07
HMGA1P17096 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-4.15□□□□□ -3.07
HMGA1P17096 AC020661.2-201ENST00000560114 134 ntBASIC-4.15□□□□□ -3.07
HMGA1P17096 AC021753.1-201ENST00000635724 168 ntBASIC-4.15□□□□□ -3.07
HMGA1P17096 RNU5F-1-201ENST00000362507 117 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 RNU6-669P-201ENST00000365575 107 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 Y_RNA.507-201ENST00000384500 99 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 MIR548A3-201ENST00000385297 97 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 MIR548F5-201ENST00000408421 86 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 Y_RNA.713-201ENST00000517013 96 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 MIR4509-3-201ENST00000578671 94 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 MIR4509-2-201ENST00000583920 94 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 MIR4509-1-201ENST00000618224 94 ntBASIC-4.16□□□□□ -3.08
HMGA1P17096 Y_RNA.74-201ENST00000362911 99 ntBASIC-4.17□□□□□ -3.08
HMGA1P17096 MT-TI-201ENST00000387365 69 ntBASIC-4.17□□□□□ -3.08
HMGA1P17096 MT-TW-201ENST00000387382 68 ntBASIC-4.17□□□□□ -3.08
HMGA1P17096 MIR379-201ENST00000362218 67 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 MIR202-201ENST00000362219 110 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 SNORA25.1-201ENST00000362326 128 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 RNU6-1085P-201ENST00000363576 107 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 RNU6-668P-201ENST00000364180 107 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 RNU6-867P-201ENST00000364956 107 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 RNU6-310P-201ENST00000384655 107 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 RNU6-656P-201ENST00000516785 107 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 MIR4528-201ENST00000577763 90 ntBASIC-4.18□□□□□ -3.08
HMGA1P17096 MTND4LP30-201ENST00000454092 297 ntBASIC-4.19□□□□□ -3.08
HMGA1P17096 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-4.19□□□□□ -3.08
HMGA1P17096 AL513043.2-201ENST00000573941 143 ntBASIC-4.19□□□□□ -3.08
HMGA1P17096 DLEU2_1.2-201ENST00000614667 120 ntBASIC-4.19□□□□□ -3.08
HMGA1P17096 MIR548Z-201ENST00000584743 97 ntBASIC-4.2□□□□□ -3.08
HMGA1P17096 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC-4.2□□□□□ -3.08
HMGA1P17096 RNU6-508P-201ENST00000363231 103 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 RNU2-72P-201ENST00000411175 163 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 AL118496.2-201ENST00000448300 230 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 RNU6-523P-201ENST00000516304 54 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 SNORA18.5-201ENST00000516616 101 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 RNU7-151P-201ENST00000516930 53 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 AL442128.1-201ENST00000615151 90 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 DLEU2_2.2-201ENST00000615474 90 ntBASIC-4.21□□□□□ -3.08
HMGA1P17096 Y_RNA.41-201ENST00000362646 102 ntBASIC-4.22□□□□□ -3.08
HMGA1P17096 Y_RNA.240-201ENST00000364469 95 ntBASIC-4.22□□□□□ -3.08
HMGA1P17096 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.22□□□□□ -3.08
HMGA1P17096 RNU6-345P-201ENST00000517001 107 ntBASIC-4.22□□□□□ -3.08
HMGA1P17096 RNU6-1314P-201ENST00000517139 104 ntBASIC-4.22□□□□□ -3.08
HMGA1P17096 MIR3163-201ENST00000581592 73 ntBASIC-4.22□□□□□ -3.08
HMGA1P17096 Z69908.1-201ENST00000622603 247 ntBASIC-4.22□□□□□ -3.08
HMGA1P17096 Y_RNA.155-201ENST00000363632 101 ntBASIC-4.23□□□□□ -3.09
HMGA1P17096 Y_RNA.325-201ENST00000365171 122 ntBASIC-4.23□□□□□ -3.09
HMGA1P17096 RNU6-649P-201ENST00000384463 107 ntBASIC-4.23□□□□□ -3.09
HMGA1P17096 RNU6-1148P-201ENST00000410992 104 ntBASIC-4.23□□□□□ -3.09
HMGA1P17096 Y_RNA.163-201ENST00000363702 113 ntBASIC-4.24□□□□□ -3.09
HMGA1P17096 RNU7-125P-201ENST00000458760 62 ntBASIC-4.24□□□□□ -3.09
HMGA1P17096 RNU6-1046P-201ENST00000516538 107 ntBASIC-4.24□□□□□ -3.09
HMGA1P17096 U6.81-201ENST00000612550 106 ntBASIC-4.24□□□□□ -3.09
HMGA1P17096 AL137067.1-201ENST00000615933 120 ntBASIC-4.24□□□□□ -3.09
HMGA1P17096 Y_RNA.9-201ENST00000362354 101 ntBASIC-4.25□□□□□ -3.09
HMGA1P17096 RNU4-90P-201ENST00000362773 141 ntBASIC-4.25□□□□□ -3.09
HMGA1P17096 RNU6-238P-201ENST00000363313 106 ntBASIC-4.25□□□□□ -3.09
HMGA1P17096 RNY4P13-201ENST00000384284 96 ntBASIC-4.25□□□□□ -3.09
HMGA1P17096 RNU6-381P-201ENST00000391259 108 ntBASIC-4.25□□□□□ -3.09
HMGA1P17096 RNU6-1161P-201ENST00000516176 102 ntBASIC-4.25□□□□□ -3.09
HMGA1P17096 RPS29P30-201ENST00000600975 111 ntBASIC-4.25□□□□□ -3.09
HMGA1P17096 SNORA26.8-201ENST00000391306 124 ntBASIC-4.26□□□□□ -3.09
HMGA1P17096 U8.20-201ENST00000459445 131 ntBASIC-4.26□□□□□ -3.09
HMGA1P17096 RNU6-1018P-201ENST00000516577 106 ntBASIC-4.27□□□□□ -3.09
HMGA1P17096 RNU6-451P-201ENST00000362921 107 ntBASIC-4.28□□□□□ -3.09
HMGA1P17096 RNU6-409P-201ENST00000384114 104 ntBASIC-4.28□□□□□ -3.09
HMGA1P17096 RNU6-130P-201ENST00000411112 103 ntBASIC-4.28□□□□□ -3.09
HMGA1P17096 Y_RNA.651-201ENST00000459380 103 ntBASIC-4.28□□□□□ -3.09
HMGA1P17096 RNU6-363P-201ENST00000362895 105 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 RNU6-587P-201ENST00000391282 106 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 SNORA17.4-201ENST00000391287 132 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 SNORD4B-201ENST00000459083 72 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 Y_RNA.693-201ENST00000516641 110 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 AL162413.1-201ENST00000603198 110 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 AC080013.6-201ENST00000606185 215 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-4.29□□□□□ -3.1
HMGA1P17096 RNU6-974P-201ENST00000384099 108 ntBASIC-4.3□□□□□ -3.1
HMGA1P17096 MIR6863-201ENST00000636112 90 ntBASIC-4.3□□□□□ -3.1
HMGA1P17096 SNORD81.2-201ENST00000365153 76 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 Y_RNA.384-201ENST00000383909 102 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 RNU6-520P-201ENST00000384717 104 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 RNU6-908P-201ENST00000410160 94 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 RNU6-232P-201ENST00000517144 64 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 MIR3915-201ENST00000578518 97 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 MIR376A1-201ENST00000616574 68 ntBASIC-4.31□□□□□ -3.1
HMGA1P17096 RNU6-1047P-201ENST00000364418 107 ntBASIC-4.32□□□□□ -3.1
HMGA1P17096 Y_RNA.541-201ENST00000384640 113 ntBASIC-4.32□□□□□ -3.1
HMGA1P17096 RNU6-780P-201ENST00000391030 104 ntBASIC-4.32□□□□□ -3.1
HMGA1P17096 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-4.32□□□□□ -3.1
HMGA1P17096 RNU7-174P-201ENST00000516248 59 ntBASIC-4.32□□□□□ -3.1
HMGA1P17096 AC037487.3-201ENST00000606668 112 ntBASIC-4.32□□□□□ -3.1
HMGA1P17096 Y_RNA.137-201ENST00000363455 112 ntBASIC-4.33□□□□□ -3.1
Retrieved 100 of 98,524 protein–RNA pairs in 239 ms