Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.54□□□□□ -2.82
APOEP02649 MTND2P23-201ENST00000422990 651 ntBASIC-2.54□□□□□ -2.82
APOEP02649 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.54□□□□□ -2.82
APOEP02649 AC006254.2-201ENST00000603259 279 ntBASIC-2.54□□□□□ -2.82
APOEP02649 MIR8062-201ENST00000621515 85 ntBASIC-2.54□□□□□ -2.82
APOEP02649 Y_RNA.65-201ENST00000362846 100 ntBASIC-2.55□□□□□ -2.82
APOEP02649 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.55□□□□□ -2.82
APOEP02649 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.55□□□□□ -2.82
APOEP02649 SNORD114-3-201ENST00000364969 75 ntBASIC-2.56□□□□□ -2.82
APOEP02649 RNU6-1039P-201ENST00000383931 107 ntBASIC-2.56□□□□□ -2.82
APOEP02649 RNU6-239P-201ENST00000390990 99 ntBASIC-2.56□□□□□ -2.82
APOEP02649 SNORD90-201ENST00000391145 111 ntBASIC-2.56□□□□□ -2.82
APOEP02649 RNU6-985P-201ENST00000410182 104 ntBASIC-2.56□□□□□ -2.82
APOEP02649 AC108019.1-201ENST00000512540 175 ntBASIC-2.57□□□□□ -2.82
APOEP02649 MIR6509-201ENST00000614603 85 ntBASIC-2.57□□□□□ -2.82
APOEP02649 MIR4773-1-201ENST00000637203 78 ntBASIC-2.57□□□□□ -2.82
APOEP02649 RNU6-80P-201ENST00000384195 107 ntBASIC-2.58□□□□□ -2.82
APOEP02649 Y_RNA.502-201ENST00000384478 113 ntBASIC-2.58□□□□□ -2.82
APOEP02649 RNU7-121P-201ENST00000516604 62 ntBASIC-2.58□□□□□ -2.82
APOEP02649 AC130289.1-201ENST00000577321 73 ntBASIC-2.58□□□□□ -2.82
APOEP02649 MIR3657-201ENST00000584818 117 ntBASIC-2.58□□□□□ -2.82
APOEP02649 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.58□□□□□ -2.82
APOEP02649 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.58□□□□□ -2.82
APOEP02649 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.59□□□□□ -2.82
APOEP02649 MIR577-201ENST00000385196 96 ntBASIC-2.59□□□□□ -2.82
APOEP02649 RNU7-154P-201ENST00000516194 62 ntBASIC-2.59□□□□□ -2.82
APOEP02649 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.59□□□□□ -2.82
APOEP02649 RNU6-238P-201ENST00000363313 106 ntBASIC-2.6□□□□□ -2.83
APOEP02649 MIR519A2-201ENST00000384990 87 ntBASIC-2.6□□□□□ -2.83
APOEP02649 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.6□□□□□ -2.83
APOEP02649 RNU6-168P-201ENST00000516189 101 ntBASIC-2.6□□□□□ -2.83
APOEP02649 RNU6-151P-201ENST00000364158 107 ntBASIC-2.61□□□□□ -2.83
APOEP02649 RNU6-1283P-201ENST00000365314 105 ntBASIC-2.61□□□□□ -2.83
APOEP02649 RNA5SP292-201ENST00000390974 118 ntBASIC-2.61□□□□□ -2.83
APOEP02649 SNORD4B-201ENST00000459083 72 ntBASIC-2.61□□□□□ -2.83
APOEP02649 RNU6-732P-201ENST00000516033 103 ntBASIC-2.61□□□□□ -2.83
APOEP02649 RNU6-635P-201ENST00000516651 102 ntBASIC-2.61□□□□□ -2.83
APOEP02649 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.62□□□□□ -2.83
APOEP02649 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.62□□□□□ -2.83
APOEP02649 RNU6-400P-201ENST00000391173 106 ntBASIC-2.62□□□□□ -2.83
APOEP02649 RNU2-38P-201ENST00000410856 79 ntBASIC-2.62□□□□□ -2.83
APOEP02649 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.62□□□□□ -2.83
APOEP02649 AP002795.1-201ENST00000534879 84 ntBASIC-2.62□□□□□ -2.83
APOEP02649 AC134503.1-201ENST00000633048 54 ntBASIC-2.62□□□□□ -2.83
APOEP02649 RNY4P6-201ENST00000363667 96 ntBASIC-2.63□□□□□ -2.83
APOEP02649 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.63□□□□□ -2.83
APOEP02649 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.63□□□□□ -2.83
APOEP02649 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.63□□□□□ -2.83
APOEP02649 Y_RNA.619-201ENST00000410951 90 ntBASIC-2.63□□□□□ -2.83
APOEP02649 RNU6ATAC32P-201ENST00000516026 76 ntBASIC-2.63□□□□□ -2.83
APOEP02649 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.63□□□□□ -2.83
APOEP02649 RNU6-62P-201ENST00000516526 102 ntBASIC-2.63□□□□□ -2.83
APOEP02649 MIR548Z-201ENST00000584743 97 ntBASIC-2.63□□□□□ -2.83
APOEP02649 RNU6-824P-201ENST00000363724 104 ntBASIC-2.64□□□□□ -2.83
APOEP02649 RNU6-915P-201ENST00000364943 103 ntBASIC-2.64□□□□□ -2.83
APOEP02649 RNU6-460P-201ENST00000391158 108 ntBASIC-2.64□□□□□ -2.83
APOEP02649 MIR4756-201ENST00000577874 78 ntBASIC-2.64□□□□□ -2.83
APOEP02649 MIR4490-201ENST00000582647 84 ntBASIC-2.64□□□□□ -2.83
APOEP02649 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.65□□□□□ -2.83
APOEP02649 Y_RNA.396-201ENST00000383949 103 ntBASIC-2.65□□□□□ -2.83
APOEP02649 MTATP6P29-201ENST00000415057 132 ntBASIC-2.65□□□□□ -2.83
APOEP02649 MIR664B-201ENST00000626756 61 ntBASIC-2.65□□□□□ -2.83
APOEP02649 MIR5683-201ENST00000636514 76 ntBASIC-2.65□□□□□ -2.83
APOEP02649 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.66□□□□□ -2.84
APOEP02649 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.66□□□□□ -2.84
APOEP02649 MTND5P20-201ENST00000448677 143 ntBASIC-2.66□□□□□ -2.84
APOEP02649 AL691482.2-201ENST00000457453 84 ntBASIC-2.66□□□□□ -2.84
APOEP02649 RNU6-518P-201ENST00000516056 96 ntBASIC-2.66□□□□□ -2.84
APOEP02649 SNORA18.5-201ENST00000516616 101 ntBASIC-2.66□□□□□ -2.84
APOEP02649 MIR3171-201ENST00000584270 74 ntBASIC-2.66□□□□□ -2.84
APOEP02649 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.67□□□□□ -2.84
APOEP02649 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.67□□□□□ -2.84
APOEP02649 MIR521-2-201ENST00000384818 87 ntBASIC-2.67□□□□□ -2.84
APOEP02649 MT-TD-201ENST00000387419 68 ntBASIC-2.67□□□□□ -2.84
APOEP02649 MIR548I1-201ENST00000408810 149 ntBASIC-2.67□□□□□ -2.84
APOEP02649 RPL35AP4-201ENST00000412007 102 ntBASIC-2.67□□□□□ -2.84
APOEP02649 AC090616.4-201ENST00000448026 115 ntBASIC-2.67□□□□□ -2.84
APOEP02649 RNU7-88P-201ENST00000458752 63 ntBASIC-2.67□□□□□ -2.84
APOEP02649 MIR4694-201ENST00000578534 80 ntBASIC-2.67□□□□□ -2.84
APOEP02649 RNU6-644P-201ENST00000391155 98 ntBASIC-2.68□□□□□ -2.84
APOEP02649 SNORD19-201ENST00000391191 68 ntBASIC-2.68□□□□□ -2.84
APOEP02649 SNORA19.1-201ENST00000410656 129 ntBASIC-2.68□□□□□ -2.84
APOEP02649 RNU6-781P-201ENST00000516377 101 ntBASIC-2.68□□□□□ -2.84
APOEP02649 Y_RNA.702-201ENST00000516843 96 ntBASIC-2.68□□□□□ -2.84
APOEP02649 RNU6-832P-201ENST00000363319 107 ntBASIC-2.69□□□□□ -2.84
APOEP02649 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.69□□□□□ -2.84
APOEP02649 SNORD58.1-201ENST00000391313 66 ntBASIC-2.69□□□□□ -2.84
APOEP02649 RNU7-197P-201ENST00000458836 62 ntBASIC-2.69□□□□□ -2.84
APOEP02649 MTATP8P1-201ENST00000467115 207 ntBASIC-2.69□□□□□ -2.84
APOEP02649 Y_RNA.804-201ENST00000615262 101 ntBASIC-2.69□□□□□ -2.84
APOEP02649 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.7□□□□□ -2.84
APOEP02649 RNU6-880P-201ENST00000384526 107 ntBASIC-2.7□□□□□ -2.84
APOEP02649 AC103810.7-201ENST00000607821 91 ntBASIC-2.7□□□□□ -2.84
APOEP02649 RNU4-11P-201ENST00000365287 132 ntBASIC-2.71□□□□□ -2.84
APOEP02649 MIR1207-201ENST00000408249 87 ntBASIC-2.71□□□□□ -2.84
APOEP02649 RNU6-519P-201ENST00000410590 108 ntBASIC-2.71□□□□□ -2.84
APOEP02649 U7.5-201ENST00000517224 61 ntBASIC-2.72□□□□□ -2.84
APOEP02649 MIR3613-201ENST00000579844 87 ntBASIC-2.72□□□□□ -2.84
APOEP02649 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.73□□□□□ -2.85
APOEP02649 Y_RNA.233-201ENST00000364407 101 ntBASIC-2.73□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 248 ms