Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 RNU6-1128P-201ENST00000362825 109 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 RNU6-519P-201ENST00000410590 108 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 MIR3163-201ENST00000581592 73 ntBASIC-1.87□□□□□ -2.71
SPTA1P02549 SNORD113-8-201ENST00000363497 74 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 RNU6-681P-201ENST00000364012 104 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 MIR548AA1-201ENST00000384971 97 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 RNU6-1148P-201ENST00000410992 104 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 SNORD2.1-201ENST00000458762 69 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.59-201ENST00000362828 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 RNU6-752P-201ENST00000516376 102 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 AC109635.3-201ENST00000529536 185 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.88□□□□□ -2.71
SPTA1P02549 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 RNY4P10-201ENST00000365571 96 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 SNORA24B-201ENST00000384176 131 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MTND3P22-201ENST00000510932 243 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 RNU6-861P-201ENST00000516745 106 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MIR3611-201ENST00000584484 83 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 Y_RNA.88-201ENST00000363029 99 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 RNU6-643P-201ENST00000384018 107 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 Y_RNA.509-201ENST00000384506 99 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MIR509-1-201ENST00000385265 94 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 MIR509-2-201ENST00000390724 91 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 SNORA18.5-201ENST00000516616 101 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 AC119751.7-201ENST00000600494 245 ntBASIC-1.89□□□□□ -2.71
SPTA1P02549 SNORA25.1-201ENST00000362326 128 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 RNU6-340P-201ENST00000364005 107 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 SNORD81.2-201ENST00000365153 76 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 Y_RNA.651-201ENST00000459380 103 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 RNU7-174P-201ENST00000516248 59 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 RNU6-247P-201ENST00000362636 107 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 MIR3613-201ENST00000579844 87 ntBASIC-1.9□□□□□ -2.71
SPTA1P02549 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 SNORD116-29-201ENST00000384516 83 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 RNU7-151P-201ENST00000516930 53 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 AC006362.1-201ENST00000567392 174 ntBASIC-1.91□□□□□ -2.71
SPTA1P02549 RNU6-645P-201ENST00000364649 106 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-1.91□□□□□ -2.72
SPTA1P02549 RNU6-816P-201ENST00000390914 107 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.91□□□□□ -2.72
SPTA1P02549 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 RNU6-483P-201ENST00000384088 108 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 RNU6-121P-201ENST00000410525 99 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 SNORA7.5-201ENST00000410672 110 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 AL121914.1-201ENST00000450188 156 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 AL132765.2-201ENST00000610812 351 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 MIR548N-201ENST00000408742 75 ntBASIC-1.92□□□□□ -2.72
SPTA1P02549 RNU6-290P-201ENST00000365212 101 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 SNORA63.7-201ENST00000365579 123 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR630-201ENST00000384957 97 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 SNORA40.14-201ENST00000516543 86 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 SNORD1B-201ENST00000363091 84 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 RNY1P1-201ENST00000364372 112 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR577-201ENST00000385196 96 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR3121-201ENST00000579680 77 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 AC104985.2-201ENST00000620598 500 ntBASIC-1.93□□□□□ -2.72
SPTA1P02549 MIR5690-201ENST00000583739 73 ntBASIC-1.94□□□□□ -2.72
SPTA1P02549 RNU6-768P-201ENST00000384683 107 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-238P-201ENST00000363313 106 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-770P-201ENST00000363929 105 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 Y_RNA.213-201ENST00000364178 111 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 MIR581-201ENST00000384895 96 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-578P-201ENST00000390980 103 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-1111P-201ENST00000391118 107 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 SNORD11.1-201ENST00000459482 85 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 DLEU2_1.1-201ENST00000612089 120 ntBASIC-1.95□□□□□ -2.72
SPTA1P02549 RNU6-698P-201ENST00000363523 107 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-912P-201ENST00000363800 104 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-34P-201ENST00000364874 107 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 Y_RNA.395-201ENST00000383945 109 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-129P-201ENST00000391022 107 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 SNORD63.2-201ENST00000516303 64 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 MIR548Z-201ENST00000584743 97 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-493P-201ENST00000391321 108 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 RNU6-982P-201ENST00000516216 102 ntBASIC-1.96□□□□□ -2.72
SPTA1P02549 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.97□□□□□ -2.72
SPTA1P02549 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-1.97□□□□□ -2.72
SPTA1P02549 MTND1P29-201ENST00000448112 647 ntBASIC-1.97□□□□□ -2.72
SPTA1P02549 SNORD113-3-201ENST00000364830 72 ntBASIC-1.97□□□□□ -2.73
SPTA1P02549 Y_RNA.520-201ENST00000384556 102 ntBASIC-1.97□□□□□ -2.73
SPTA1P02549 MIR548D2-201ENST00000384955 97 ntBASIC-1.97□□□□□ -2.73
SPTA1P02549 MIRLET7A3-201ENST00000362116 74 ntBASIC-1.98□□□□□ -2.73
SPTA1P02549 RNY4P14-201ENST00000363656 96 ntBASIC-1.98□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 229.9 ms