Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 Y_RNA.264-201ENST00000364665 102 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 RNU6-54P-201ENST00000365563 107 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 SNORA24B-201ENST00000384176 131 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 RNU6-411P-201ENST00000384451 107 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 SNORD45A-201ENST00000384512 84 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.66□□□□□ -2.3
COL2A1P02458 RNU6-807P-201ENST00000516805 107 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 MIR3612-201ENST00000579753 87 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 MTRNR2L2-201ENST00000604882 87 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 AC243829.6-201ENST00000612652 106 ntBASIC0.66□□□□□ -2.3
COL2A1P02458 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
COL2A1P02458 RNU6-1126P-201ENST00000384002 107 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 RNU6-1241P-201ENST00000384536 107 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 SNORD28-201ENST00000384706 75 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 MIR519E-201ENST00000385075 84 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 MIR154-201ENST00000385243 84 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 RNU6-1177P-201ENST00000391058 104 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 AC074348.1-201ENST00000426503 132 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 RNA5SP404-201ENST00000517118 132 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 MIR4514-201ENST00000581410 57 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 MIR3675-201ENST00000583661 73 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 MIR6759-201ENST00000638110 65 ntBASIC0.65□□□□□ -2.31
COL2A1P02458 RNY1P8-201ENST00000383970 114 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 RNU6V-201ENST00000384105 107 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 SNORD30.1-201ENST00000391309 70 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 RNA5SP222-201ENST00000411039 105 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 AL691482.2-201ENST00000457453 84 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 U7.7-201ENST00000459276 60 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 AC097510.1-201ENST00000510945 133 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 Y_RNA.660-201ENST00000516002 120 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 RNA5SP147-201ENST00000516493 109 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 MIR4636-201ENST00000582271 80 ntBASIC0.64□□□□□ -2.31
COL2A1P02458 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.63□□□□□ -2.31
COL2A1P02458 Y_RNA.174-201ENST00000363781 105 ntBASIC0.63□□□□□ -2.31
COL2A1P02458 SNORD42B-201ENST00000458893 67 ntBASIC0.63□□□□□ -2.31
COL2A1P02458 RNU6-469P-201ENST00000516253 101 ntBASIC0.63□□□□□ -2.31
COL2A1P02458 RNU6-1110P-201ENST00000516462 101 ntBASIC0.63□□□□□ -2.31
COL2A1P02458 MIR4653-201ENST00000585107 83 ntBASIC0.63□□□□□ -2.31
COL2A1P02458 SNORD18A-201ENST00000363753 72 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 RNU6-540P-201ENST00000384622 101 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 MIR92A1-201ENST00000385233 78 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 SNORD12-201ENST00000391002 90 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 RNU6-269P-201ENST00000391077 97 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 RNU6-587P-201ENST00000391282 106 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 snoU13.13-201ENST00000458842 104 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 AC114801.3-201ENST00000510231 177 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 RNU6-982P-201ENST00000516216 102 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 AC018659.1-201ENST00000551083 169 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 MIR4752-201ENST00000579672 72 ntBASIC0.62□□□□□ -2.31
COL2A1P02458 MIR1265-201ENST00000408444 86 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 FABP5P4-201ENST00000437203 171 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC0.61□□□□□ -2.31
COL2A1P02458 MIR6509-201ENST00000614603 85 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 MIR1297-201ENST00000637311 77 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 RNU6-990P-201ENST00000364385 104 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 SNORD115-22-201ENST00000364456 82 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 RNU6-726P-201ENST00000364680 107 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 SNORA36.2-201ENST00000384004 127 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 MIR573-201ENST00000384964 99 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 MIR617-201ENST00000385030 97 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 AC244098.3-201ENST00000424803 96 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 ACA64.5-201ENST00000516207 127 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 SNORA62.5-201ENST00000516634 120 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 MIR5087-201ENST00000635826 76 ntBASIC0.61□□□□□ -2.31
COL2A1P02458 MIR18A-201ENST00000362310 71 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 SNORA36.1-201ENST00000363424 132 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 RNU6-681P-201ENST00000364012 104 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 RNU6-649P-201ENST00000384463 107 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 RNU6-604P-201ENST00000390917 100 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 RNU2-59P-201ENST00000410482 191 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 Y_RNA.606-201ENST00000410579 103 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 MIR4460-201ENST00000577862 86 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 U6.81-201ENST00000612550 106 ntBASIC0.6□□□□□ -2.31
COL2A1P02458 SNORD115-44-201ENST00000365391 82 ntBASIC0.59□□□□□ -2.32
COL2A1P02458 MIR19B1-201ENST00000384829 87 ntBASIC0.59□□□□□ -2.32
COL2A1P02458 RNA5SP484-201ENST00000458857 111 ntBASIC0.59□□□□□ -2.32
COL2A1P02458 RNU6-274P-201ENST00000459566 107 ntBASIC0.59□□□□□ -2.32
COL2A1P02458 RNA5SP255-201ENST00000516370 107 ntBASIC0.59□□□□□ -2.32
COL2A1P02458 RNA5SP47-201ENST00000517230 109 ntBASIC0.59□□□□□ -2.32
COL2A1P02458 RNU6-495P-201ENST00000362995 107 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 SNORD114-24-201ENST00000365029 72 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 RNU6-895P-201ENST00000384125 103 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
COL2A1P02458 RNU6-663P-201ENST00000391105 106 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 RNU6-634P-201ENST00000459134 106 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 RNA5SP227-201ENST00000516184 113 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 MIR4639-201ENST00000584938 69 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 MIR548O2-201ENST00000616090 70 ntBASIC0.58□□□□□ -2.32
COL2A1P02458 SNORD113.1-201ENST00000363280 73 ntBASIC0.57□□□□□ -2.32
COL2A1P02458 RNU1-141P-201ENST00000364623 158 ntBASIC0.57□□□□□ -2.32
COL2A1P02458 Y_RNA.340-201ENST00000365330 92 ntBASIC0.57□□□□□ -2.32
COL2A1P02458 RNU6-1039P-201ENST00000383931 107 ntBASIC0.57□□□□□ -2.32
COL2A1P02458 RNU6-788P-201ENST00000390967 104 ntBASIC0.57□□□□□ -2.32
COL2A1P02458 U3.27-201ENST00000391237 200 ntBASIC0.57□□□□□ -2.32
COL2A1P02458 MIR4473-201ENST00000583731 91 ntBASIC0.57□□□□□ -2.32
COL2A1P02458 MIR200A-201ENST00000384875 90 ntBASIC0.56□□□□□ -2.32
COL2A1P02458 RNU6-630P-201ENST00000391258 106 ntBASIC0.56□□□□□ -2.32
COL2A1P02458 AC069271.1-201ENST00000445577 156 ntBASIC0.56□□□□□ -2.32
COL2A1P02458 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.56□□□□□ -2.32
COL2A1P02458 RNU6-881P-201ENST00000516813 102 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 314.1 ms