Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 SNORA2.1-201ENST00000363089 137 ntBASIC1.52□□□□□ -2.17
PTCD1O75127 AC002350.1-201ENST00000490759 375 ntBASIC1.52□□□□□ -2.17
PTCD1O75127 RNA5SP404-201ENST00000517118 132 ntBASIC1.52□□□□□ -2.17
PTCD1O75127 MIR548V-201ENST00000584165 80 ntBASIC1.52□□□□□ -2.17
PTCD1O75127 RNU6-940P-201ENST00000363433 104 ntBASIC1.51□□□□□ -2.17
PTCD1O75127 RNU6-1089P-201ENST00000516473 104 ntBASIC1.51□□□□□ -2.17
PTCD1O75127 AC022709.1-201ENST00000615967 87 ntBASIC1.51□□□□□ -2.17
PTCD1O75127 AC244669.1-204ENST00000621564 178 ntBASIC1.51□□□□□ -2.17
PTCD1O75127 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
PTCD1O75127 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
PTCD1O75127 MIR7-2-201ENST00000384970 110 ntBASIC1.5□□□□□ -2.17
PTCD1O75127 MT-TY-201ENST00000387409 66 ntBASIC1.5□□□□□ -2.17
PTCD1O75127 SNORD41.1-201ENST00000391000 69 ntBASIC1.5□□□□□ -2.17
PTCD1O75127 AL157398.1-201ENST00000452981 186 ntBASIC1.5□□□□□ -2.17
PTCD1O75127 MIR4295-201ENST00000585286 85 ntBASIC1.5□□□□□ -2.17
PTCD1O75127 MIR6739-201ENST00000622461 75 ntBASIC1.5□□□□□ -2.17
PTCD1O75127 SNORD114-24-201ENST00000365029 72 ntBASIC1.49□□□□□ -2.17
PTCD1O75127 RNU6-1335P-201ENST00000365426 107 ntBASIC1.49□□□□□ -2.17
PTCD1O75127 RNU6-997P-201ENST00000384725 107 ntBASIC1.49□□□□□ -2.17
PTCD1O75127 MIR216B-201ENST00000390186 82 ntBASIC1.49□□□□□ -2.17
PTCD1O75127 RNU6-122P-201ENST00000516818 107 ntBASIC1.49□□□□□ -2.17
PTCD1O75127 AC018659.1-201ENST00000551083 169 ntBASIC1.49□□□□□ -2.17
PTCD1O75127 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.48□□□□□ -2.17
PTCD1O75127 SNORD60.1-201ENST00000362451 73 ntBASIC1.48□□□□□ -2.17
PTCD1O75127 SNORD28-201ENST00000384706 75 ntBASIC1.48□□□□□ -2.17
PTCD1O75127 AC087343.1-201ENST00000477341 475 ntBASIC1.48□□□□□ -2.17
PTCD1O75127 RNU6-469P-201ENST00000516253 101 ntBASIC1.48□□□□□ -2.17
PTCD1O75127 RNU5B-6P-201ENST00000516765 68 ntBASIC1.48□□□□□ -2.17
PTCD1O75127 RNU6-936P-201ENST00000384005 107 ntBASIC1.47□□□□□ -2.17
PTCD1O75127 Y_RNA.540-201ENST00000384638 111 ntBASIC1.47□□□□□ -2.17
PTCD1O75127 MIR630-201ENST00000384957 97 ntBASIC1.47□□□□□ -2.17
PTCD1O75127 RNU4ATAC4P-201ENST00000516307 126 ntBASIC1.47□□□□□ -2.17
PTCD1O75127 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
PTCD1O75127 RNU1-124P-201ENST00000363861 145 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 RNU6-726P-201ENST00000364680 107 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 MIR548J-201ENST00000408833 112 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 Y_RNA.722-201ENST00000517279 114 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 AC025627.3-201ENST00000582078 182 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 MIR3938-201ENST00000582157 103 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 RNU6-92P-201ENST00000605893 104 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 MIR6515-201ENST00000619843 57 ntBASIC1.46□□□□□ -2.18
PTCD1O75127 RNA5SP215-201ENST00000363440 122 ntBASIC1.45□□□□□ -2.18
PTCD1O75127 SNORD18A-201ENST00000363753 72 ntBASIC1.45□□□□□ -2.18
PTCD1O75127 RNU6-716P-201ENST00000365621 103 ntBASIC1.45□□□□□ -2.18
PTCD1O75127 MIR4460-201ENST00000577862 86 ntBASIC1.45□□□□□ -2.18
PTCD1O75127 MIR6788-201ENST00000618842 66 ntBASIC1.45□□□□□ -2.18
PTCD1O75127 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
PTCD1O75127 RNU1-141P-201ENST00000364623 158 ntBASIC1.44□□□□□ -2.18
PTCD1O75127 MIR573-201ENST00000384964 99 ntBASIC1.44□□□□□ -2.18
PTCD1O75127 RNU6-269P-201ENST00000391077 97 ntBASIC1.44□□□□□ -2.18
PTCD1O75127 MIR3612-201ENST00000579753 87 ntBASIC1.44□□□□□ -2.18
PTCD1O75127 RNA5SP484-201ENST00000458857 111 ntBASIC1.43□□□□□ -2.18
PTCD1O75127 RNA5SP255-201ENST00000516370 107 ntBASIC1.43□□□□□ -2.18
PTCD1O75127 RNA5SP47-201ENST00000517230 109 ntBASIC1.43□□□□□ -2.18
PTCD1O75127 MIR4639-201ENST00000584938 69 ntBASIC1.43□□□□□ -2.18
PTCD1O75127 RNU6-1312P-201ENST00000362425 108 ntBASIC1.42□□□□□ -2.18
PTCD1O75127 RNU6-1184P-201ENST00000384588 108 ntBASIC1.42□□□□□ -2.18
PTCD1O75127 MIR618-201ENST00000385287 98 ntBASIC1.42□□□□□ -2.18
PTCD1O75127 RNU6-135P-201ENST00000516769 101 ntBASIC1.42□□□□□ -2.18
PTCD1O75127 MIR151B-201ENST00000584249 96 ntBASIC1.42□□□□□ -2.18
PTCD1O75127 U4.4-201ENST00000620626 117 ntBASIC1.42□□□□□ -2.18
PTCD1O75127 MIR548C-201ENST00000384815 97 ntBASIC1.41□□□□□ -2.18
PTCD1O75127 SNORD99-201ENST00000408612 74 ntBASIC1.41□□□□□ -2.18
PTCD1O75127 RNU6-955P-201ENST00000410497 104 ntBASIC1.41□□□□□ -2.18
PTCD1O75127 RNU6-1223P-201ENST00000517124 104 ntBASIC1.41□□□□□ -2.18
PTCD1O75127 U2.7-201ENST00000619197 100 ntBASIC1.41□□□□□ -2.18
PTCD1O75127 AC011195.1-201ENST00000578177 177 ntBASIC1.4□□□□□ -2.19
PTCD1O75127 MIR3678-201ENST00000578455 94 ntBASIC1.4□□□□□ -2.19
PTCD1O75127 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.4□□□□□ -2.19
PTCD1O75127 SNORA33.1-201ENST00000364957 130 ntBASIC1.39□□□□□ -2.19
PTCD1O75127 MIR582-201ENST00000365731 98 ntBASIC1.39□□□□□ -2.19
PTCD1O75127 MIR521-2-201ENST00000384818 87 ntBASIC1.39□□□□□ -2.19
PTCD1O75127 MIR548L-201ENST00000408303 86 ntBASIC1.39□□□□□ -2.19
PTCD1O75127 RNU7-174P-201ENST00000516248 59 ntBASIC1.39□□□□□ -2.19
PTCD1O75127 RNA5SP480-201ENST00000516840 109 ntBASIC1.39□□□□□ -2.19
PTCD1O75127 RNA5SP436-201ENST00000516020 115 ntBASIC1.38□□□□□ -2.19
PTCD1O75127 MIR548AE1-201ENST00000583292 70 ntBASIC1.38□□□□□ -2.19
PTCD1O75127 MIR548AD-201ENST00000584780 82 ntBASIC1.38□□□□□ -2.19
PTCD1O75127 PVT1_3.1-201ENST00000620853 95 ntBASIC1.38□□□□□ -2.19
PTCD1O75127 MIR373-201ENST00000362273 69 ntBASIC1.37□□□□□ -2.19
PTCD1O75127 RNU7-74P-201ENST00000459104 62 ntBASIC1.37□□□□□ -2.19
PTCD1O75127 Y_RNA.633-201ENST00000459107 95 ntBASIC1.37□□□□□ -2.19
PTCD1O75127 AC021146.9-201ENST00000512503 156 ntBASIC1.37□□□□□ -2.19
PTCD1O75127 SNORD114-21-201ENST00000606412 72 ntBASIC1.37□□□□□ -2.19
PTCD1O75127 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.37□□□□□ -2.19
PTCD1O75127 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
PTCD1O75127 RNU6-1246P-201ENST00000391064 107 ntBASIC1.36□□□□□ -2.19
PTCD1O75127 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.36□□□□□ -2.19
PTCD1O75127 RNU6-1162P-201ENST00000384443 104 ntBASIC1.35□□□□□ -2.19
PTCD1O75127 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC1.35□□□□□ -2.19
PTCD1O75127 RNU6-302P-201ENST00000365249 107 ntBASIC1.34□□□□□ -2.19
PTCD1O75127 SNORA8.2-201ENST00000384372 139 ntBASIC1.34□□□□□ -2.19
PTCD1O75127 RNU6-939P-201ENST00000384634 107 ntBASIC1.34□□□□□ -2.19
PTCD1O75127 SNORA41B-201ENST00000384785 128 ntBASIC1.34□□□□□ -2.19
PTCD1O75127 MIR652-201ENST00000385278 98 ntBASIC1.34□□□□□ -2.19
PTCD1O75127 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.34□□□□□ -2.19
PTCD1O75127 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.34□□□□□ -2.19
PTCD1O75127 AL162376.1-201ENST00000624117 175 ntBASIC1.34□□□□□ -2.19
PTCD1O75127 Y_RNA.125-201ENST00000363371 111 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 277.9 ms