Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 AL589823.1-201ENST00000429577 183 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 AC104996.3-201ENST00000590718 94 ntBASIC-2.64□□□□□ -2.83
HMGB3O15347 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.64□□□□□ -2.83
HMGB3O15347 AC018880.2-201ENST00000414265 201 ntBASIC-2.65□□□□□ -2.83
HMGB3O15347 MIR3139-201ENST00000579145 76 ntBASIC-2.65□□□□□ -2.83
HMGB3O15347 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 Y_RNA.163-201ENST00000363702 113 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 SNORD19-201ENST00000391191 68 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 AC026407.1-201ENST00000518369 204 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 AL513043.2-201ENST00000573941 143 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 MIR3657-201ENST00000584818 117 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 AC139792.2-201ENST00000624218 587 ntBASIC-2.66□□□□□ -2.84
HMGB3O15347 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 SNORD54-201ENST00000459159 67 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 RNU6-62P-201ENST00000516526 102 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 MIR6509-201ENST00000614603 85 ntBASIC-2.67□□□□□ -2.84
HMGB3O15347 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 RNY3P1-201ENST00000365085 102 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 SNORD42.2-201ENST00000365570 69 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 MIR521-2-201ENST00000384818 87 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 RNA5SP136-201ENST00000410906 107 ntBASIC-2.68□□□□□ -2.84
HMGB3O15347 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 RNA5SP405-201ENST00000363059 114 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 RNU6-774P-201ENST00000363238 107 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 Y_RNA.344-201ENST00000365381 112 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 MIR203A-201ENST00000384836 110 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 MIR3121-201ENST00000579680 77 ntBASIC-2.69□□□□□ -2.84
HMGB3O15347 MIR369-201ENST00000362155 70 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 Y_RNA.153-201ENST00000363615 91 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 Y_RNA.352-201ENST00000365439 102 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 Y_RNA.527-201ENST00000384573 102 ntBASIC-2.7□□□□□ -2.84
HMGB3O15347 RNU6-79P-201ENST00000362511 107 ntBASIC-2.71□□□□□ -2.84
HMGB3O15347 SNORD116-4-201ENST00000384733 96 ntBASIC-2.71□□□□□ -2.84
HMGB3O15347 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-2.71□□□□□ -2.84
HMGB3O15347 MIR548P-201ENST00000408336 84 ntBASIC-2.71□□□□□ -2.84
HMGB3O15347 Y_RNA.158-201ENST00000363651 101 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 Y_RNA.277-201ENST00000364754 102 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 SNORA19.1-201ENST00000410656 129 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 MIR4773-1-201ENST00000637203 78 ntBASIC-2.72□□□□□ -2.84
HMGB3O15347 SNORD4B-201ENST00000459083 72 ntBASIC-2.73□□□□□ -2.85
HMGB3O15347 RNU6-518P-201ENST00000516056 96 ntBASIC-2.73□□□□□ -2.85
HMGB3O15347 RNU6-988P-201ENST00000519081 107 ntBASIC-2.73□□□□□ -2.85
HMGB3O15347 RNU6-194P-201ENST00000363862 105 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 Y_RNA.248-201ENST00000364501 109 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 Y_RNA.529-201ENST00000384586 119 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 MT-TM-201ENST00000387377 68 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-816P-201ENST00000390914 107 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 SNORD90-201ENST00000391145 111 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-1268P-201ENST00000391214 107 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-1239P-201ENST00000391310 107 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 MTATP6P29-201ENST00000415057 132 ntBASIC-2.74□□□□□ -2.85
HMGB3O15347 RNU6-238P-201ENST00000363313 106 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 RNU6-824P-201ENST00000363724 104 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 AL021921.1-201ENST00000442774 93 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 RNU7-88P-201ENST00000458752 63 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 U7.5-201ENST00000517224 61 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.75□□□□□ -2.85
HMGB3O15347 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 RNU6-151P-201ENST00000364158 107 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 SNORD127-201ENST00000458892 86 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 AC130289.1-201ENST00000577321 73 ntBASIC-2.76□□□□□ -2.85
HMGB3O15347 RNA5SP292-201ENST00000390974 118 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 SNORD37.2-201ENST00000391075 66 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 RNU6-644P-201ENST00000391155 98 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR1263-201ENST00000408324 86 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR1302-6-201ENST00000408466 90 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 RNU2-38P-201ENST00000410856 79 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 AL691482.2-201ENST00000457453 84 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR548Z-201ENST00000584743 97 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 MIR6739-201ENST00000622461 75 ntBASIC-2.77□□□□□ -2.85
HMGB3O15347 Y_RNA.435-201ENST00000384095 112 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 RNU6-246P-201ENST00000384702 107 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 MIR577-201ENST00000385196 96 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 Y_RNA.626-201ENST00000411288 95 ntBASIC-2.78□□□□□ -2.85
HMGB3O15347 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 RNU7-121P-201ENST00000516604 62 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 SNORA18.5-201ENST00000516616 101 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 MIR4439-201ENST00000583746 80 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 MIR3658-201ENST00000636291 56 ntBASIC-2.79□□□□□ -2.86
HMGB3O15347 RNU6-239P-201ENST00000390990 99 ntBASIC-2.8□□□□□ -2.86
HMGB3O15347 RNU6-1318P-201ENST00000365389 103 ntBASIC-2.81□□□□□ -2.86
HMGB3O15347 RNU6-918P-201ENST00000391219 106 ntBASIC-2.81□□□□□ -2.86
HMGB3O15347 DNAJC19P2-201ENST00000593340 302 ntBASIC-2.81□□□□□ -2.86
HMGB3O15347 Y_RNA.483-201ENST00000384380 101 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 RNU6-713P-201ENST00000384761 107 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 MIR548I1-201ENST00000408810 149 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 MIR4694-201ENST00000578534 80 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 MIR4680-201ENST00000580906 66 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 U6.104-201ENST00000637979 90 ntBASIC-2.82□□□□□ -2.86
HMGB3O15347 Y_RNA.356-201ENST00000365475 113 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 RNU6-695P-201ENST00000391157 104 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 MIR548Q-201ENST00000408404 100 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 MTND3P2-201ENST00000438452 342 ntBASIC-2.83□□□□□ -2.86
HMGB3O15347 MIR548AG1-201ENST00000579932 66 ntBASIC-2.83□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 239.6 ms