Protein–RNA interactions for Protein: O00479

HMGN4, High mobility group nucleosome-binding domain-containing protein 4, humanhuman

Predictions only

Length 90 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4O00479 U2.7-201ENST00000619197 100 ntBASIC-3.16□□□□□ -2.92
HMGN4O00479 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.16□□□□□ -2.92
HMGN4O00479 Y_RNA.153-201ENST00000363615 91 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 Y_RNA.198-201ENST00000364013 98 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 Y_RNA.401-201ENST00000383965 117 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 Y_RNA.501-201ENST00000384467 103 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 MIR1302-11-201ENST00000408051 138 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 MIR1302-9-201ENST00000408365 138 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 MIR1302-10-201ENST00000408734 138 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 SNORA18.5-201ENST00000516616 101 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 MIR4282-201ENST00000583613 67 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 MIR1302-2-201ENST00000607096 138 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.17□□□□□ -2.92
HMGN4O00479 SNORA75.5-201ENST00000391291 81 ntBASIC-3.18□□□□□ -2.92
HMGN4O00479 Y_RNA.590-201ENST00000410140 107 ntBASIC-3.18□□□□□ -2.92
HMGN4O00479 RNU6-861P-201ENST00000516745 106 ntBASIC-3.18□□□□□ -2.92
HMGN4O00479 MIR3149-201ENST00000584629 83 ntBASIC-3.18□□□□□ -2.92
HMGN4O00479 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.19□□□□□ -2.92
HMGN4O00479 AL118496.2-201ENST00000448300 230 ntBASIC-3.19□□□□□ -2.92
HMGN4O00479 DLEU2_3.2-201ENST00000612883 73 ntBASIC-3.19□□□□□ -2.92
HMGN4O00479 RNY4-201ENST00000516507 96 ntBASIC-3.2□□□□□ -2.92
HMGN4O00479 Y_RNA.397-201ENST00000383950 98 ntBASIC-3.21□□□□□ -2.92
HMGN4O00479 RNU6-1267P-201ENST00000410747 107 ntBASIC-3.21□□□□□ -2.92
HMGN4O00479 MIR429-201ENST00000362106 83 ntBASIC-3.22□□□□□ -2.92
HMGN4O00479 Y_RNA.186-201ENST00000363899 92 ntBASIC-3.22□□□□□ -2.92
HMGN4O00479 SNORD115-31-201ENST00000365318 82 ntBASIC-3.22□□□□□ -2.92
HMGN4O00479 AL035461.1-201ENST00000421490 332 ntBASIC-3.22□□□□□ -2.92
HMGN4O00479 RNU6-1338P-201ENST00000516328 91 ntBASIC-3.22□□□□□ -2.92
HMGN4O00479 RNU6-752P-201ENST00000516376 102 ntBASIC-3.22□□□□□ -2.92
HMGN4O00479 Y_RNA.166-201ENST00000363730 102 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 Y_RNA.259-201ENST00000364619 101 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 RNU6-644P-201ENST00000391155 98 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 Y_RNA.630-201ENST00000411370 108 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 RNU6-656P-201ENST00000516785 107 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 MIR548W-201ENST00000581970 74 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 AC002553.4-201ENST00000616896 331 ntBASIC-3.23□□□□□ -2.93
HMGN4O00479 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.23□□□□□ -2.93
HMGN4O00479 RNU6-766P-201ENST00000362478 107 ntBASIC-3.24□□□□□ -2.93
HMGN4O00479 RNU6-275P-201ENST00000364910 107 ntBASIC-3.24□□□□□ -2.93
HMGN4O00479 MIR548A3-201ENST00000385297 97 ntBASIC-3.24□□□□□ -2.93
HMGN4O00479 SNORA40.15-201ENST00000516884 107 ntBASIC-3.24□□□□□ -2.93
HMGN4O00479 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-3.24□□□□□ -2.93
HMGN4O00479 AC113139.1-201ENST00000605049 239 ntBASIC-3.24□□□□□ -2.93
HMGN4O00479 FTX_4.1-201ENST00000616291 147 ntBASIC-3.24□□□□□ -2.93
HMGN4O00479 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 RNU6-770P-201ENST00000363929 105 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 Y_RNA.419-201ENST00000384041 102 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 RNU6-101P-201ENST00000410323 104 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 snoU13.10-201ENST00000459301 103 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 RNY3P15-201ENST00000516297 97 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 MTND4LP32-201ENST00000636111 270 ntBASIC-3.25□□□□□ -2.93
HMGN4O00479 Y_RNA.513-201ENST00000384522 100 ntBASIC-3.26□□□□□ -2.93
HMGN4O00479 Y_RNA.554-201ENST00000384672 102 ntBASIC-3.26□□□□□ -2.93
HMGN4O00479 Y_RNA.686-201ENST00000516548 134 ntBASIC-3.26□□□□□ -2.93
HMGN4O00479 Y_RNA.75-201ENST00000362927 97 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 Y_RNA.84-201ENST00000363011 104 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 RNY4P9-201ENST00000363194 97 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 RNU6-598P-201ENST00000364017 105 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 RNY3P14-201ENST00000384309 102 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 SNORD116-29-201ENST00000384516 83 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 RNU6-519P-201ENST00000410590 108 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 Y_RNA.701-201ENST00000516812 110 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 MIR6844-201ENST00000637122 62 ntBASIC-3.27□□□□□ -2.93
HMGN4O00479 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 RNU6-1113P-201ENST00000384348 107 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 RNU6-816P-201ENST00000390914 107 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 RNU6-1268P-201ENST00000391214 107 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 RNU6-1239P-201ENST00000391310 107 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 MIR1252-201ENST00000408861 65 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 RNU2-16P-201ENST00000410712 136 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 MIR3170-201ENST00000582699 77 ntBASIC-3.28□□□□□ -2.93
HMGN4O00479 RNU6-682P-201ENST00000363843 106 ntBASIC-3.29□□□□□ -2.94
HMGN4O00479 Y_RNA.187-201ENST00000363918 113 ntBASIC-3.29□□□□□ -2.94
HMGN4O00479 RBMX2P4-201ENST00000441256 376 ntBASIC-3.29□□□□□ -2.94
HMGN4O00479 Y_RNA.19-201ENST00000362462 99 ntBASIC-3.3□□□□□ -2.94
HMGN4O00479 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.3□□□□□ -2.94
HMGN4O00479 MIR4439-201ENST00000583746 80 ntBASIC-3.3□□□□□ -2.94
HMGN4O00479 U2.14-201ENST00000615943 113 ntBASIC-3.3□□□□□ -2.94
HMGN4O00479 RNU6-1079P-201ENST00000362861 110 ntBASIC-3.31□□□□□ -2.94
HMGN4O00479 MIR577-201ENST00000385196 96 ntBASIC-3.31□□□□□ -2.94
HMGN4O00479 RNA5SP136-201ENST00000410906 107 ntBASIC-3.31□□□□□ -2.94
HMGN4O00479 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.31□□□□□ -2.94
HMGN4O00479 Y_RNA.718-201ENST00000517110 102 ntBASIC-3.31□□□□□ -2.94
HMGN4O00479 MIR3646-201ENST00000578301 84 ntBASIC-3.31□□□□□ -2.94
HMGN4O00479 MIR3688-2-201ENST00000636963 87 ntBASIC-3.31□□□□□ -2.94
HMGN4O00479 MTND3P3-201ENST00000505004 126 ntBASIC-3.32□□□□□ -2.94
HMGN4O00479 RNU6-1089P-201ENST00000516473 104 ntBASIC-3.32□□□□□ -2.94
HMGN4O00479 MIR548C-201ENST00000384815 97 ntBASIC-3.33□□□□□ -2.94
HMGN4O00479 RNU7-152P-201ENST00000458982 64 ntBASIC-3.33□□□□□ -2.94
HMGN4O00479 AC013734.1-201ENST00000619329 111 ntBASIC-3.33□□□□□ -2.94
HMGN4O00479 RNU6-806P-201ENST00000365147 105 ntBASIC-3.34□□□□□ -2.94
HMGN4O00479 Y_RNA.337-201ENST00000365312 102 ntBASIC-3.34□□□□□ -2.94
HMGN4O00479 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.34□□□□□ -2.94
HMGN4O00479 RNU6-823P-201ENST00000391042 103 ntBASIC-3.34□□□□□ -2.94
HMGN4O00479 AC097484.2-201ENST00000509147 251 ntBASIC-3.34□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms