Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 Y_RNA.205-201ENST00000364128 113 ntBASIC0.46□□□□□ -2.34
PCDHA13Q9Y5I0 Y_RNA.369-201ENST00000365568 117 ntBASIC0.46□□□□□ -2.34
PCDHA13Q9Y5I0 SNORA2A-201ENST00000383885 135 ntBASIC0.46□□□□□ -2.34
PCDHA13Q9Y5I0 RNU6-49P-201ENST00000384256 107 ntBASIC0.46□□□□□ -2.34
PCDHA13Q9Y5I0 MIR6755-201ENST00000619993 66 ntBASIC0.46□□□□□ -2.34
PCDHA13Q9Y5I0 RNU4-32P-201ENST00000363404 141 ntBASIC0.45□□□□□ -2.34
PCDHA13Q9Y5I0 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.45□□□□□ -2.34
PCDHA13Q9Y5I0 Y_RNA.620-201ENST00000411009 88 ntBASIC0.45□□□□□ -2.34
PCDHA13Q9Y5I0 AC114737.2-201ENST00000421583 173 ntBASIC0.45□□□□□ -2.34
PCDHA13Q9Y5I0 RNA5SP484-201ENST00000458857 111 ntBASIC0.45□□□□□ -2.34
PCDHA13Q9Y5I0 SNORA18.5-201ENST00000516616 101 ntBASIC0.45□□□□□ -2.34
PCDHA13Q9Y5I0 MIR4752-201ENST00000579672 72 ntBASIC0.45□□□□□ -2.34
PCDHA13Q9Y5I0 RNU6-1298P-201ENST00000362456 101 ntBASIC0.44□□□□□ -2.34
PCDHA13Q9Y5I0 RNA5SP292-201ENST00000390974 118 ntBASIC0.44□□□□□ -2.34
PCDHA13Q9Y5I0 MIR5582-201ENST00000579697 68 ntBASIC0.44□□□□□ -2.34
PCDHA13Q9Y5I0 U7.6-201ENST00000610841 64 ntBASIC0.44□□□□□ -2.34
PCDHA13Q9Y5I0 AC069503.3-201ENST00000618674 145 ntBASIC0.44□□□□□ -2.34
PCDHA13Q9Y5I0 MIR103A1-201ENST00000362165 78 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 RNU6-219P-201ENST00000364728 107 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 Y_RNA.423-201ENST00000384057 113 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 MIR451A-201ENST00000385059 72 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 RNA5SP193-201ENST00000410353 107 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 RNA5SP170-201ENST00000517150 101 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 NAMPTP3-201ENST00000569273 224 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 MIR1273G-201ENST00000577677 100 ntBASIC0.43□□□□□ -2.34
PCDHA13Q9Y5I0 RNU6-1327P-201ENST00000365302 105 ntBASIC0.42□□□□□ -2.34
PCDHA13Q9Y5I0 MIR519C-201ENST00000385053 87 ntBASIC0.42□□□□□ -2.34
PCDHA13Q9Y5I0 MT-TY-201ENST00000387409 66 ntBASIC0.42□□□□□ -2.34
PCDHA13Q9Y5I0 SNORD110-201ENST00000408189 75 ntBASIC0.42□□□□□ -2.34
PCDHA13Q9Y5I0 AC006210.1-201ENST00000424882 111 ntBASIC0.42□□□□□ -2.34
PCDHA13Q9Y5I0 MIR4460-201ENST00000577862 86 ntBASIC0.42□□□□□ -2.34
PCDHA13Q9Y5I0 SNORA70.25-201ENST00000612741 95 ntBASIC0.42□□□□□ -2.34
PCDHA13Q9Y5I0 RNY4P3-201ENST00000365254 95 ntBASIC0.41□□□□□ -2.34
PCDHA13Q9Y5I0 RNU6-497P-201ENST00000365316 104 ntBASIC0.41□□□□□ -2.34
PCDHA13Q9Y5I0 SNORA50A-201ENST00000384225 134 ntBASIC0.41□□□□□ -2.34
PCDHA13Q9Y5I0 RNU6-675P-201ENST00000384236 104 ntBASIC0.41□□□□□ -2.34
PCDHA13Q9Y5I0 AC243829.6-201ENST00000612652 106 ntBASIC0.41□□□□□ -2.34
PCDHA13Q9Y5I0 MIR548O2-201ENST00000616090 70 ntBASIC0.41□□□□□ -2.34
PCDHA13Q9Y5I0 SNORA63.2-201ENST00000362603 126 ntBASIC0.4□□□□□ -2.35
PCDHA13Q9Y5I0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.4□□□□□ -2.35
PCDHA13Q9Y5I0 RNU6-402P-201ENST00000410678 103 ntBASIC0.4□□□□□ -2.35
PCDHA13Q9Y5I0 SNORD115-27-201ENST00000364430 82 ntBASIC0.39□□□□□ -2.35
PCDHA13Q9Y5I0 RNU6-1051P-201ENST00000365471 102 ntBASIC0.39□□□□□ -2.35
PCDHA13Q9Y5I0 MIR4796-201ENST00000580742 81 ntBASIC0.39□□□□□ -2.35
PCDHA13Q9Y5I0 Y_RNA.17-201ENST00000362433 111 ntBASIC0.38□□□□□ -2.35
PCDHA13Q9Y5I0 RNU6-294P-201ENST00000364999 102 ntBASIC0.38□□□□□ -2.35
PCDHA13Q9Y5I0 RNU6-1134P-201ENST00000365156 101 ntBASIC0.38□□□□□ -2.35
PCDHA13Q9Y5I0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.38□□□□□ -2.35
PCDHA13Q9Y5I0 AC108740.1-201ENST00000498629 225 ntBASIC0.38□□□□□ -2.35
PCDHA13Q9Y5I0 RNA5SP62-201ENST00000363457 110 ntBASIC0.37□□□□□ -2.35
PCDHA13Q9Y5I0 RNA5SP128-201ENST00000365305 116 ntBASIC0.37□□□□□ -2.35
PCDHA13Q9Y5I0 Y_RNA.558-201ENST00000384685 113 ntBASIC0.37□□□□□ -2.35
PCDHA13Q9Y5I0 MIR760-201ENST00000390220 80 ntBASIC0.37□□□□□ -2.35
PCDHA13Q9Y5I0 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.37□□□□□ -2.35
PCDHA13Q9Y5I0 MIR924-201ENST00000638017 53 ntBASIC0.37□□□□□ -2.35
PCDHA13Q9Y5I0 SNORA9.1-201ENST00000362412 131 ntBASIC0.36□□□□□ -2.35
PCDHA13Q9Y5I0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.36□□□□□ -2.35
PCDHA13Q9Y5I0 FGF7P7-201ENST00000514120 227 ntBASIC0.36□□□□□ -2.35
PCDHA13Q9Y5I0 RNU6-267P-201ENST00000516714 103 ntBASIC0.36□□□□□ -2.35
PCDHA13Q9Y5I0 AC069113.3-201ENST00000521019 150 ntBASIC0.36□□□□□ -2.35
PCDHA13Q9Y5I0 RNA5SP325-201ENST00000363756 130 ntBASIC0.35□□□□□ -2.35
PCDHA13Q9Y5I0 SNORD115-37-201ENST00000363768 82 ntBASIC0.35□□□□□ -2.35
PCDHA13Q9Y5I0 AC093729.1-201ENST00000513074 128 ntBASIC0.35□□□□□ -2.35
PCDHA13Q9Y5I0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.35□□□□□ -2.35
PCDHA13Q9Y5I0 RNU7-153P-201ENST00000516455 62 ntBASIC0.35□□□□□ -2.35
PCDHA13Q9Y5I0 YWHAEP2-201ENST00000580066 112 ntBASIC0.35□□□□□ -2.35
PCDHA13Q9Y5I0 Y_RNA.43-201ENST00000362670 111 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 RNU6-815P-201ENST00000384080 113 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 SNORA24B-201ENST00000384176 131 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 Y_RNA.593-201ENST00000410292 98 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 RNU6-1052P-201ENST00000411398 104 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 HMGN2P22-201ENST00000427588 175 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 AC073261.1-201ENST00000429409 121 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 RNU6-719P-201ENST00000516671 104 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 MIR3140-201ENST00000583685 90 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 MIR548AD-201ENST00000584780 82 ntBASIC0.34□□□□□ -2.36
PCDHA13Q9Y5I0 SNORA25.13-201ENST00000516395 103 ntBASIC0.33□□□□□ -2.36
PCDHA13Q9Y5I0 RNA5SP134-201ENST00000516492 96 ntBASIC0.33□□□□□ -2.36
PCDHA13Q9Y5I0 IGLL4P-201ENST00000614590 133 ntBASIC0.33□□□□□ -2.36
PCDHA13Q9Y5I0 MIR548BB-201ENST00000626714 66 ntBASIC0.33□□□□□ -2.36
PCDHA13Q9Y5I0 MIR4315-1-201ENST00000636800 73 ntBASIC0.33□□□□□ -2.36
PCDHA13Q9Y5I0 MIR4315-2-201ENST00000640925 73 ntBASIC0.33□□□□□ -2.36
PCDHA13Q9Y5I0 MIR330-201ENST00000362196 94 ntBASIC0.32□□□□□ -2.36
PCDHA13Q9Y5I0 RNU6V-201ENST00000384105 107 ntBASIC0.32□□□□□ -2.36
PCDHA13Q9Y5I0 MIR501-201ENST00000390204 84 ntBASIC0.32□□□□□ -2.36
PCDHA13Q9Y5I0 SNORD90-201ENST00000391145 111 ntBASIC0.32□□□□□ -2.36
PCDHA13Q9Y5I0 MIR8087-201ENST00000612745 78 ntBASIC0.32□□□□□ -2.36
PCDHA13Q9Y5I0 RNU6-1255P-201ENST00000363434 112 ntBASIC0.31□□□□□ -2.36
PCDHA13Q9Y5I0 RNU5B-6P-201ENST00000516765 68 ntBASIC0.31□□□□□ -2.36
PCDHA13Q9Y5I0 MIR4677-201ENST00000584153 80 ntBASIC0.31□□□□□ -2.36
PCDHA13Q9Y5I0 uc_338.10-201ENST00000621872 182 ntBASIC0.31□□□□□ -2.36
PCDHA13Q9Y5I0 RNU5F-1-201ENST00000362507 117 ntBASIC0.3□□□□□ -2.36
PCDHA13Q9Y5I0 RNY1P1-201ENST00000364372 112 ntBASIC0.3□□□□□ -2.36
PCDHA13Q9Y5I0 MIR450A2-201ENST00000385022 100 ntBASIC0.3□□□□□ -2.36
PCDHA13Q9Y5I0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
PCDHA13Q9Y5I0 RNU6-624P-201ENST00000363411 107 ntBASIC0.29□□□□□ -2.36
PCDHA13Q9Y5I0 Y_RNA.407-201ENST00000383986 113 ntBASIC0.29□□□□□ -2.36
PCDHA13Q9Y5I0 Y_RNA.437-201ENST00000384113 113 ntBASIC0.29□□□□□ -2.36
PCDHA13Q9Y5I0 RNU6-1177P-201ENST00000391058 104 ntBASIC0.29□□□□□ -2.36
PCDHA13Q9Y5I0 SNORA62.5-201ENST00000516634 120 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms