Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
ATG4BQ9Y4P1 RNU6-832P-201ENST00000363319 107 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 SNORD114-15-201ENST00000364687 72 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 RPS29P8-201ENST00000445109 171 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 AC068339.1-201ENST00000526965 141 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 MIR4432-201ENST00000581823 84 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 AC025521.1-201ENST00000621624 286 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 uc_338.36-201ENST00000622331 158 ntBASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.41□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.42□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-935P-201ENST00000410371 100 ntBASIC-0.42□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.42□□□□□ -2.48
ATG4BQ9Y4P1 SNORD33.1-201ENST00000516213 88 ntBASIC-0.42□□□□□ -2.48
ATG4BQ9Y4P1 AL391099.1-201ENST00000624635 187 ntBASIC-0.42□□□□□ -2.48
ATG4BQ9Y4P1 RNY3P2-201ENST00000362918 102 ntBASIC-0.43□□□□□ -2.48
ATG4BQ9Y4P1 MIR216B-201ENST00000390186 82 ntBASIC-0.43□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-175P-201ENST00000516896 107 ntBASIC-0.43□□□□□ -2.48
ATG4BQ9Y4P1 MIR4263-201ENST00000584745 83 ntBASIC-0.43□□□□□ -2.48
ATG4BQ9Y4P1 MIR3914-2-201ENST00000637339 95 ntBASIC-0.43□□□□□ -2.48
ATG4BQ9Y4P1 MIR20A-201ENST00000362279 71 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 SNORD95.1-201ENST00000364099 68 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 MIR451A-201ENST00000385059 72 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 MIR652-201ENST00000385278 98 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 MIR548A3-201ENST00000385297 97 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 SNORD75.1-201ENST00000408373 60 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 RNU4-63P-201ENST00000411313 118 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-65P-201ENST00000516332 98 ntBASIC-0.44□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.45□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-80P-201ENST00000384195 107 ntBASIC-0.45□□□□□ -2.48
ATG4BQ9Y4P1 MIR3613-201ENST00000579844 87 ntBASIC-0.45□□□□□ -2.48
ATG4BQ9Y4P1 MIR4536-1-201ENST00000583537 88 ntBASIC-0.45□□□□□ -2.48
ATG4BQ9Y4P1 MIR548O2-201ENST00000616090 70 ntBASIC-0.45□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.46□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-762P-201ENST00000517107 102 ntBASIC-0.46□□□□□ -2.48
ATG4BQ9Y4P1 MIR5009-201ENST00000578736 100 ntBASIC-0.46□□□□□ -2.48
ATG4BQ9Y4P1 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 SNORD45B-201ENST00000364617 72 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 RNU6-75P-201ENST00000515944 104 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 AL513043.2-201ENST00000573941 143 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 U6.95-201ENST00000636931 70 ntBASIC-0.47□□□□□ -2.48
ATG4BQ9Y4P1 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.48□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-209P-201ENST00000384118 107 ntBASIC-0.48□□□□□ -2.49
ATG4BQ9Y4P1 SNORA3B-201ENST00000391305 131 ntBASIC-0.48□□□□□ -2.49
ATG4BQ9Y4P1 RNA5SP67-201ENST00000516422 131 ntBASIC-0.48□□□□□ -2.49
ATG4BQ9Y4P1 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 SNORD50.2-201ENST00000365465 70 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-455P-201ENST00000384681 107 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 AC244090.1-201ENST00000441884 93 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-719P-201ENST00000516671 104 ntBASIC-0.49□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-54P-201ENST00000365563 107 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 FGF7P7-201ENST00000514120 227 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-659P-201ENST00000516454 104 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 AP000676.1-201ENST00000533307 52 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 MIR3671-201ENST00000580455 88 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 MIR4439-201ENST00000583746 80 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 AC103810.7-201ENST00000607821 91 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.5□□□□□ -2.49
ATG4BQ9Y4P1 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.51□□□□□ -2.49
ATG4BQ9Y4P1 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.51□□□□□ -2.49
ATG4BQ9Y4P1 RNU7-85P-201ENST00000458851 63 ntBASIC-0.51□□□□□ -2.49
ATG4BQ9Y4P1 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.51□□□□□ -2.49
ATG4BQ9Y4P1 MIR3668-201ENST00000582138 75 ntBASIC-0.51□□□□□ -2.49
ATG4BQ9Y4P1 RNU4-36P-201ENST00000364294 144 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-813P-201ENST00000384691 107 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 SNORD56B-201ENST00000384713 71 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 MIR9-2-201ENST00000384838 87 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 MIR3681-201ENST00000580089 72 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 MIR3133-201ENST00000583157 78 ntBASIC-0.52□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-774P-201ENST00000363238 107 ntBASIC-0.53□□□□□ -2.49
ATG4BQ9Y4P1 U3.27-201ENST00000391237 200 ntBASIC-0.53□□□□□ -2.49
ATG4BQ9Y4P1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.53□□□□□ -2.49
ATG4BQ9Y4P1 AL445193.1-201ENST00000441183 141 ntBASIC-0.53□□□□□ -2.49
ATG4BQ9Y4P1 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.54□□□□□ -2.5
ATG4BQ9Y4P1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.54□□□□□ -2.5
ATG4BQ9Y4P1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.54□□□□□ -2.5
ATG4BQ9Y4P1 RNU6-795P-201ENST00000516323 103 ntBASIC-0.54□□□□□ -2.5
ATG4BQ9Y4P1 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.54□□□□□ -2.5
ATG4BQ9Y4P1 MIR4280-201ENST00000582178 76 ntBASIC-0.54□□□□□ -2.5
ATG4BQ9Y4P1 RNU6-132P-201ENST00000383863 107 ntBASIC-0.55□□□□□ -2.5
ATG4BQ9Y4P1 SNORD116-14-201ENST00000383894 92 ntBASIC-0.55□□□□□ -2.5
ATG4BQ9Y4P1 SNORD116-17-201ENST00000383929 92 ntBASIC-0.55□□□□□ -2.5
ATG4BQ9Y4P1 SNORD116-15-201ENST00000384445 92 ntBASIC-0.55□□□□□ -2.5
ATG4BQ9Y4P1 SNORD116-19-201ENST00000384729 92 ntBASIC-0.55□□□□□ -2.5
ATG4BQ9Y4P1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.55□□□□□ -2.5
ATG4BQ9Y4P1 RNU6-644P-201ENST00000391155 98 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 235.8 ms