Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RPL30P7-201ENST00000479312 323 ntBASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 RNU6-1089P-201ENST00000516473 104 ntBASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 MIR2115-201ENST00000516657 100 ntBASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 SNORA77B-201ENST00000578179 125 ntBASIC1.97□□□□□ -2.09
COL17A1Q9UMD9 Y_RNA.13-201ENST00000362403 112 ntBASIC1.96□□□□□ -2.1
COL17A1Q9UMD9 RNU6-495P-201ENST00000362995 107 ntBASIC1.96□□□□□ -2.1
COL17A1Q9UMD9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.96□□□□□ -2.1
COL17A1Q9UMD9 RNU6-656P-201ENST00000516785 107 ntBASIC1.96□□□□□ -2.1
COL17A1Q9UMD9 MIR3657-201ENST00000584818 117 ntBASIC1.96□□□□□ -2.1
COL17A1Q9UMD9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.96□□□□□ -2.1
COL17A1Q9UMD9 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.95□□□□□ -2.1
COL17A1Q9UMD9 RNA5SP457-201ENST00000363657 124 ntBASIC1.95□□□□□ -2.1
COL17A1Q9UMD9 RNA5SP147-201ENST00000516493 109 ntBASIC1.95□□□□□ -2.1
COL17A1Q9UMD9 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL17A1Q9UMD9 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL17A1Q9UMD9 RNA5SP95-201ENST00000410319 137 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 AL356379.1-201ENST00000414105 126 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 RNU7-24P-201ENST00000458867 62 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 AL133373.1-201ENST00000497098 94 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 Y_RNA.433-201ENST00000384089 102 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 RNU6-520P-201ENST00000384717 104 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 MIR216A-201ENST00000385063 110 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 AC079140.2-201ENST00000506193 142 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 AC068338.1-201ENST00000565567 176 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 MIR6082-201ENST00000613604 109 ntBASIC1.94□□□□□ -2.1
COL17A1Q9UMD9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL17A1Q9UMD9 RNU6-302P-201ENST00000365249 107 ntBASIC1.93□□□□□ -2.1
COL17A1Q9UMD9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL17A1Q9UMD9 RNU6-260P-201ENST00000384092 107 ntBASIC1.93□□□□□ -2.1
COL17A1Q9UMD9 MIR548F3-201ENST00000408509 87 ntBASIC1.93□□□□□ -2.1
COL17A1Q9UMD9 RNA5SP245-201ENST00000364239 121 ntBASIC1.92□□□□□ -2.1
COL17A1Q9UMD9 MT-TN-201ENST00000387400 73 ntBASIC1.92□□□□□ -2.1
COL17A1Q9UMD9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.92□□□□□ -2.1
COL17A1Q9UMD9 MIR6516-201ENST00000630554 81 ntBASIC1.92□□□□□ -2.1
COL17A1Q9UMD9 RNU4-33P-201ENST00000364316 85 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 MIR548C-201ENST00000384815 97 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 MIR545-201ENST00000385085 106 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 snoU13.25-201ENST00000458945 104 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 AC138907.6-201ENST00000568401 126 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 AC138869.1-201ENST00000568623 124 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 MIR3198-2-201ENST00000577868 80 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 MIR3937-201ENST00000580135 106 ntBASIC1.91□□□□□ -2.1
COL17A1Q9UMD9 MIR18B-201ENST00000454574 71 ntBASIC1.9□□□□□ -2.11
COL17A1Q9UMD9 RNU7-185P-201ENST00000459215 60 ntBASIC1.9□□□□□ -2.11
COL17A1Q9UMD9 MIR103A2-201ENST00000362154 78 ntBASIC1.88□□□□□ -2.11
COL17A1Q9UMD9 snoU13.21-201ENST00000459368 105 ntBASIC1.88□□□□□ -2.11
COL17A1Q9UMD9 SNORA40.17-201ENST00000517256 115 ntBASIC1.88□□□□□ -2.11
COL17A1Q9UMD9 SNORD1A-201ENST00000364968 72 ntBASIC1.88□□□□□ -2.11
COL17A1Q9UMD9 RNU6-54P-201ENST00000365563 107 ntBASIC1.88□□□□□ -2.11
COL17A1Q9UMD9 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
COL17A1Q9UMD9 SNORD42B-201ENST00000458893 67 ntBASIC1.87□□□□□ -2.11
COL17A1Q9UMD9 MIR548AG2-201ENST00000581228 64 ntBASIC1.87□□□□□ -2.11
COL17A1Q9UMD9 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
COL17A1Q9UMD9 RNU6-990P-201ENST00000364385 104 ntBASIC1.86□□□□□ -2.11
COL17A1Q9UMD9 MIR1185-1-201ENST00000408598 86 ntBASIC1.86□□□□□ -2.11
COL17A1Q9UMD9 MIR6739-201ENST00000622461 75 ntBASIC1.86□□□□□ -2.11
COL17A1Q9UMD9 MIR377-201ENST00000362145 69 ntBASIC1.85□□□□□ -2.11
COL17A1Q9UMD9 RNA5SP264-201ENST00000363115 107 ntBASIC1.85□□□□□ -2.11
COL17A1Q9UMD9 RNU6-580P-201ENST00000365159 107 ntBASIC1.85□□□□□ -2.11
COL17A1Q9UMD9 MIR1257-201ENST00000408490 117 ntBASIC1.85□□□□□ -2.11
COL17A1Q9UMD9 AL157398.1-201ENST00000452981 186 ntBASIC1.85□□□□□ -2.11
COL17A1Q9UMD9 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
COL17A1Q9UMD9 SNORA2.1-201ENST00000363089 137 ntBASIC1.84□□□□□ -2.11
COL17A1Q9UMD9 RNU6-535P-201ENST00000384722 107 ntBASIC1.84□□□□□ -2.11
COL17A1Q9UMD9 RNU6-765P-201ENST00000516916 99 ntBASIC1.84□□□□□ -2.11
COL17A1Q9UMD9 SNORD115-44-201ENST00000365391 82 ntBASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 RNU6-724P-201ENST00000390958 105 ntBASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 SNORD113-2-201ENST00000391082 72 ntBASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 SNORD83.1-201ENST00000411362 77 ntBASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 RNU6ATAC14P-201ENST00000516218 91 ntBASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 MIR3664-201ENST00000579074 99 ntBASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 MIR548O2-201ENST00000616090 70 ntBASIC1.83□□□□□ -2.12
COL17A1Q9UMD9 Y_RNA.115-201ENST00000363272 98 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 RNU7-119P-201ENST00000459279 63 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 RNU7-13P-201ENST00000516413 62 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 AP003716.2-201ENST00000528260 108 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 U4.4-201ENST00000620626 117 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 MIR302D-201ENST00000362275 68 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 RNU6-1126P-201ENST00000384002 107 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 MIR517B-201ENST00000385102 67 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 MIR4422-201ENST00000581938 83 ntBASIC1.82□□□□□ -2.12
COL17A1Q9UMD9 SNORA41B-201ENST00000384785 128 ntBASIC1.81□□□□□ -2.12
COL17A1Q9UMD9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
COL17A1Q9UMD9 RNU6-698P-201ENST00000363523 107 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 RNU6-34P-201ENST00000364874 107 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 snoU13.13-201ENST00000458842 104 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 RNU7-174P-201ENST00000516248 59 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 RNA5SP330-201ENST00000517096 96 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 RNU6-231P-201ENST00000517122 103 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 CYP3A137P-201ENST00000562436 69 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 AC008608.1-201ENST00000603910 127 ntBASIC1.8□□□□□ -2.12
COL17A1Q9UMD9 RNU6V-201ENST00000384105 107 ntBASIC1.79□□□□□ -2.12
COL17A1Q9UMD9 MIR193B-201ENST00000384907 83 ntBASIC1.79□□□□□ -2.12
COL17A1Q9UMD9 SNORD116.2-201ENST00000391251 93 ntBASIC1.79□□□□□ -2.12
COL17A1Q9UMD9 AC244505.6-201ENST00000452829 130 ntBASIC1.79□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 256.7 ms