Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
CDT1Q9H211 Y_RNA.596-201ENST00000410462 109 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 RNU6-1052P-201ENST00000411398 104 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.63□□□□□ -2.31
CDT1Q9H211 RNU6-719P-201ENST00000516671 104 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 MIR5588-201ENST00000581890 63 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 AC104996.3-201ENST00000590718 94 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 MIR6828-201ENST00000636181 60 ntBASIC0.63□□□□□ -2.31
CDT1Q9H211 RNU6-1126P-201ENST00000384002 107 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 RNU6-811P-201ENST00000384069 107 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 MIR519C-201ENST00000385053 87 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 snoU13.17-201ENST00000458802 104 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 RNU6-469P-201ENST00000516253 101 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 RNU7-13P-201ENST00000516413 62 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 SCARNA16.5-201ENST00000517114 183 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 AC067863.3-201ENST00000624172 122 ntBASIC0.62□□□□□ -2.31
CDT1Q9H211 RNU6-820P-201ENST00000384273 107 ntBASIC0.61□□□□□ -2.31
CDT1Q9H211 Y_RNA.491-201ENST00000384417 107 ntBASIC0.61□□□□□ -2.31
CDT1Q9H211 SNORD41.1-201ENST00000391000 69 ntBASIC0.61□□□□□ -2.31
CDT1Q9H211 RNA5SP193-201ENST00000410353 107 ntBASIC0.61□□□□□ -2.31
CDT1Q9H211 SNORA25.13-201ENST00000516395 103 ntBASIC0.61□□□□□ -2.31
CDT1Q9H211 MIR7107-201ENST00000611489 80 ntBASIC0.61□□□□□ -2.31
CDT1Q9H211 AC243829.3-201ENST00000622177 108 ntBASIC0.61□□□□□ -2.31
CDT1Q9H211 MIR519E-201ENST00000385075 84 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 RNU6-269P-201ENST00000391077 97 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 MIR1236-201ENST00000408340 102 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.6□□□□□ -2.31
CDT1Q9H211 MIR2113-201ENST00000459007 91 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 AC093729.1-201ENST00000513074 128 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 RNU4-54P-201ENST00000516428 129 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 RNA5SP476-201ENST00000516613 103 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 RNA5SP268-201ENST00000516828 124 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 AC140658.3-201ENST00000567603 271 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 MIR4752-201ENST00000579672 72 ntBASIC0.6□□□□□ -2.31
CDT1Q9H211 RNU6-1229P-201ENST00000364295 107 ntBASIC0.59□□□□□ -2.31
CDT1Q9H211 RNU6-35P-201ENST00000384530 107 ntBASIC0.59□□□□□ -2.31
CDT1Q9H211 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
CDT1Q9H211 HAR1A.1-201ENST00000459583 118 ntBASIC0.59□□□□□ -2.31
CDT1Q9H211 MIR4796-201ENST00000580742 81 ntBASIC0.59□□□□□ -2.31
CDT1Q9H211 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.59□□□□□ -2.31
CDT1Q9H211 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
CDT1Q9H211 Y_RNA.239-201ENST00000364444 113 ntBASIC0.58□□□□□ -2.32
CDT1Q9H211 SNORA8.2-201ENST00000384372 139 ntBASIC0.58□□□□□ -2.32
CDT1Q9H211 MIR1197-201ENST00000408818 88 ntBASIC0.58□□□□□ -2.32
CDT1Q9H211 AC098934.3-201ENST00000430450 190 ntBASIC0.58□□□□□ -2.32
CDT1Q9H211 AC069271.1-201ENST00000445577 156 ntBASIC0.58□□□□□ -2.32
CDT1Q9H211 RNU6-135P-201ENST00000516769 101 ntBASIC0.58□□□□□ -2.32
CDT1Q9H211 SNORA25.18-201ENST00000607153 114 ntBASIC0.58□□□□□ -2.32
CDT1Q9H211 Y_RNA.313-201ENST00000365095 103 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 RNU6-1276P-201ENST00000365372 104 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 RNU6-1051P-201ENST00000365471 102 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 AC093423.1-201ENST00000440817 142 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 AL450471.1-201ENST00000447509 127 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 RNU7-171P-201ENST00000459581 62 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 FGF7P7-201ENST00000514120 227 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 RNA5SP227-201ENST00000516184 113 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 SNORA62.5-201ENST00000516634 120 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 AC092634.7-201ENST00000621022 103 ntBASIC0.57□□□□□ -2.32
CDT1Q9H211 MIR617-201ENST00000385030 97 ntBASIC0.56□□□□□ -2.32
CDT1Q9H211 MIR451A-201ENST00000385059 72 ntBASIC0.56□□□□□ -2.32
CDT1Q9H211 MIR548U-201ENST00000390728 81 ntBASIC0.56□□□□□ -2.32
CDT1Q9H211 MIR1302-4-201ENST00000408701 150 ntBASIC0.56□□□□□ -2.32
CDT1Q9H211 RNU1-29P-201ENST00000606574 126 ntBASIC0.56□□□□□ -2.32
CDT1Q9H211 AL162376.1-201ENST00000624117 175 ntBASIC0.56□□□□□ -2.32
CDT1Q9H211 RNU6-624P-201ENST00000363411 107 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 RNU6-478P-201ENST00000363904 110 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 SNORA24B-201ENST00000384176 131 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 MIR548L-201ENST00000408303 86 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 RNU6-935P-201ENST00000410371 100 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 RNU6-229P-201ENST00000516614 102 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 MIR1245B-201ENST00000636115 69 ntBASIC0.55□□□□□ -2.32
CDT1Q9H211 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
CDT1Q9H211 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CDT1Q9H211 SNORD118-201ENST00000363593 134 ntBASIC0.54□□□□□ -2.32
CDT1Q9H211 SNORD115-44-201ENST00000365391 82 ntBASIC0.54□□□□□ -2.32
CDT1Q9H211 RNA5SP484-201ENST00000458857 111 ntBASIC0.54□□□□□ -2.32
CDT1Q9H211 RNU6-1232P-201ENST00000516299 86 ntBASIC0.54□□□□□ -2.32
CDT1Q9H211 SNORA70.25-201ENST00000612741 95 ntBASIC0.54□□□□□ -2.32
CDT1Q9H211 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.54□□□□□ -2.32
CDT1Q9H211 SNORA63.2-201ENST00000362603 126 ntBASIC0.53□□□□□ -2.32
CDT1Q9H211 RNU6-228P-201ENST00000362700 106 ntBASIC0.53□□□□□ -2.32
CDT1Q9H211 RNU1-141P-201ENST00000364623 158 ntBASIC0.53□□□□□ -2.32
CDT1Q9H211 RNU6-652P-201ENST00000365488 107 ntBASIC0.53□□□□□ -2.32
CDT1Q9H211 Y_RNA.437-201ENST00000384113 113 ntBASIC0.53□□□□□ -2.32
CDT1Q9H211 MIR4666B-201ENST00000578142 81 ntBASIC0.53□□□□□ -2.32
CDT1Q9H211 RNU6-161P-201ENST00000363051 106 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 Y_RNA.316-201ENST00000365118 111 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 Y_RNA.426-201ENST00000384068 113 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 AL157398.1-201ENST00000452981 186 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 RNU6-1108P-201ENST00000516308 104 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 AC243829.6-201ENST00000612652 106 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 MIR6086-201ENST00000638065 55 ntBASIC0.52□□□□□ -2.33
CDT1Q9H211 MIR518A1-201ENST00000385068 85 ntBASIC0.51□□□□□ -2.33
CDT1Q9H211 Y_RNA.607-201ENST00000410597 98 ntBASIC0.51□□□□□ -2.33
CDT1Q9H211 SNORA40.8-201ENST00000411034 126 ntBASIC0.51□□□□□ -2.33
CDT1Q9H211 NAMPTP3-201ENST00000569273 224 ntBASIC0.51□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 235 ms