Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR520D-201ENST00000385002 87 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 RNU6-381P-201ENST00000391259 108 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 RNU6-584P-201ENST00000410350 95 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.647-201ENST00000459194 112 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.640-201ENST00000459296 112 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 SNORA40.14-201ENST00000516543 86 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 MIR548AG1-201ENST00000579932 66 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 MIR5690-201ENST00000583739 73 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 MIR3657-201ENST00000584818 117 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.803-201ENST00000614432 112 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.815-201ENST00000616655 112 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.795-201ENST00000619475 112 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.827-201ENST00000638104 112 ntBASIC-3.36□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.37□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.541-201ENST00000384640 113 ntBASIC-3.37□□□□□ -2.95
SCAPERQ9BY12 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-3.37□□□□□ -2.95
SCAPERQ9BY12 RNU6-382P-201ENST00000365181 106 ntBASIC-3.38□□□□□ -2.95
SCAPERQ9BY12 RNU6-290P-201ENST00000365212 101 ntBASIC-3.38□□□□□ -2.95
SCAPERQ9BY12 SNORD115-46-201ENST00000390982 71 ntBASIC-3.38□□□□□ -2.95
SCAPERQ9BY12 SNORA7.5-201ENST00000410672 110 ntBASIC-3.38□□□□□ -2.95
SCAPERQ9BY12 RNY4P20-201ENST00000516678 93 ntBASIC-3.38□□□□□ -2.95
SCAPERQ9BY12 RNU6-699P-201ENST00000517081 110 ntBASIC-3.38□□□□□ -2.95
SCAPERQ9BY12 AL365265.1-201ENST00000621045 234 ntBASIC-3.38□□□□□ -2.95
SCAPERQ9BY12 Y_RNA.41-201ENST00000362646 102 ntBASIC-3.39□□□□□ -2.95
SCAPERQ9BY12 RNU6-478P-201ENST00000363904 110 ntBASIC-3.39□□□□□ -2.95
SCAPERQ9BY12 SNORA20.3-201ENST00000516880 132 ntBASIC-3.39□□□□□ -2.95
SCAPERQ9BY12 AC012531.4-201ENST00000616509 177 ntBASIC-3.39□□□□□ -2.95
SCAPERQ9BY12 RNU6-103P-201ENST00000363686 107 ntBASIC-3.4□□□□□ -2.95
SCAPERQ9BY12 RNU6-1188P-201ENST00000363795 107 ntBASIC-3.4□□□□□ -2.95
SCAPERQ9BY12 SNORD81.2-201ENST00000365153 76 ntBASIC-3.4□□□□□ -2.95
SCAPERQ9BY12 MIR559-201ENST00000385188 96 ntBASIC-3.4□□□□□ -2.95
SCAPERQ9BY12 MIR548U-201ENST00000390728 81 ntBASIC-3.4□□□□□ -2.95
SCAPERQ9BY12 AC092794.1-201ENST00000612734 582 ntBASIC-3.4□□□□□ -2.95
SCAPERQ9BY12 RNU6-824P-201ENST00000363724 104 ntBASIC-3.41□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.581-201ENST00000391017 97 ntBASIC-3.41□□□□□ -2.96
SCAPERQ9BY12 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-3.41□□□□□ -2.96
SCAPERQ9BY12 RNU6-1018P-201ENST00000516577 106 ntBASIC-3.41□□□□□ -2.96
SCAPERQ9BY12 MIR1255B1-201ENST00000636325 63 ntBASIC-3.41□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.42□□□□□ -2.96
SCAPERQ9BY12 RNU6-1051P-201ENST00000365471 102 ntBASIC-3.42□□□□□ -2.96
SCAPERQ9BY12 RNU6-694P-201ENST00000364071 147 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 RNU1-115P-201ENST00000365329 160 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 SNORD50.2-201ENST00000365465 70 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.359-201ENST00000365498 102 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.445-201ENST00000384168 102 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 RNU6-1289P-201ENST00000384431 106 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 AC109635.3-201ENST00000529536 185 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-3.43□□□□□ -2.96
SCAPERQ9BY12 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.44□□□□□ -2.96
SCAPERQ9BY12 AC013734.1-201ENST00000619329 111 ntBASIC-3.44□□□□□ -2.96
SCAPERQ9BY12 MIR4773-1-201ENST00000637203 78 ntBASIC-3.44□□□□□ -2.96
SCAPERQ9BY12 AL691482.2-201ENST00000457453 84 ntBASIC-3.44□□□□□ -2.96
SCAPERQ9BY12 SNORD116.3-201ENST00000517176 78 ntBASIC-3.44□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.236-201ENST00000364427 111 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 RNU6-696P-201ENST00000390834 107 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 RNU4-14P-201ENST00000410858 122 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 MIR4744-201ENST00000581563 82 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.812-201ENST00000610788 101 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 AC025253.1-201ENST00000613623 543 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.784-201ENST00000613803 101 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.787-201ENST00000616522 101 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.780-201ENST00000617336 101 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.801-201ENST00000619005 101 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 U6.97-201ENST00000636904 101 ntBASIC-3.45□□□□□ -2.96
SCAPERQ9BY12 RNU7-85P-201ENST00000458851 63 ntBASIC-3.46□□□□□ -2.96
SCAPERQ9BY12 MIR3163-201ENST00000581592 73 ntBASIC-3.46□□□□□ -2.96
SCAPERQ9BY12 Y_RNA.402-201ENST00000383972 102 ntBASIC-3.47□□□□□ -2.97
SCAPERQ9BY12 MIR3064-201ENST00000581130 66 ntBASIC-3.47□□□□□ -2.97
SCAPERQ9BY12 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-3.47□□□□□ -2.97
SCAPERQ9BY12 AL137067.1-201ENST00000615933 120 ntBASIC-3.47□□□□□ -2.97
SCAPERQ9BY12 MIR6739-201ENST00000622461 75 ntBASIC-3.47□□□□□ -2.97
SCAPERQ9BY12 DEFB108C-201ENST00000400154 252 ntBASIC-3.48□□□□□ -2.97
SCAPERQ9BY12 AC107308.1-201ENST00000615897 301 ntBASIC-3.48□□□□□ -2.97
SCAPERQ9BY12 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-3.48□□□□□ -2.97
SCAPERQ9BY12 AC021753.1-201ENST00000635724 168 ntBASIC-3.48□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.49□□□□□ -2.97
SCAPERQ9BY12 RNU6-682P-201ENST00000363843 106 ntBASIC-3.49□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.420-201ENST00000384043 110 ntBASIC-3.49□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.512-201ENST00000384518 102 ntBASIC-3.49□□□□□ -2.97
SCAPERQ9BY12 RBMX2P4-201ENST00000441256 376 ntBASIC-3.49□□□□□ -2.97
SCAPERQ9BY12 AC025521.1-201ENST00000621624 286 ntBASIC-3.49□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.553-201ENST00000384670 102 ntBASIC-3.5□□□□□ -2.97
SCAPERQ9BY12 RNU6-1262P-201ENST00000516217 96 ntBASIC-3.5□□□□□ -2.97
SCAPERQ9BY12 MIRLET7A2-201ENST00000362105 72 ntBASIC-3.51□□□□□ -2.97
SCAPERQ9BY12 RNU6-363P-201ENST00000362895 105 ntBASIC-3.51□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.183-201ENST00000363882 113 ntBASIC-3.51□□□□□ -2.97
SCAPERQ9BY12 RNU6-643P-201ENST00000384018 107 ntBASIC-3.51□□□□□ -2.97
SCAPERQ9BY12 AC104996.3-201ENST00000590718 94 ntBASIC-3.51□□□□□ -2.97
SCAPERQ9BY12 U6.106-201ENST00000636360 105 ntBASIC-3.51□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.31-201ENST00000362574 102 ntBASIC-3.52□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.275-201ENST00000364726 110 ntBASIC-3.52□□□□□ -2.97
SCAPERQ9BY12 SNORD116-6-201ENST00000384711 96 ntBASIC-3.52□□□□□ -2.97
SCAPERQ9BY12 Y_RNA.635-201ENST00000459041 101 ntBASIC-3.52□□□□□ -2.97
SCAPERQ9BY12 RNU6-1271P-201ENST00000517049 105 ntBASIC-3.52□□□□□ -2.97
SCAPERQ9BY12 MIR5693-201ENST00000577722 73 ntBASIC-3.52□□□□□ -2.97
SCAPERQ9BY12 AL442128.1-201ENST00000615151 90 ntBASIC-3.52□□□□□ -2.97
SCAPERQ9BY12 RNU6-578P-201ENST00000390980 103 ntBASIC-3.53□□□□□ -2.97
SCAPERQ9BY12 RNU6-62P-201ENST00000516526 102 ntBASIC-3.53□□□□□ -2.97
SCAPERQ9BY12 AC093424.1-201ENST00000604999 338 ntBASIC-3.53□□□□□ -2.97
SCAPERQ9BY12 Z99129.1-201ENST00000612510 255 ntBASIC-3.53□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 200.3 ms