Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 RNU6-907P-201ENST00000390924 102 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 SNORD75.1-201ENST00000408373 60 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 RNU6-75P-201ENST00000515944 104 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 SNORD33.1-201ENST00000516213 88 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 AC068339.1-201ENST00000526965 141 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 MIR4679-2-201ENST00000578358 77 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 MIR3681-201ENST00000580089 72 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 MIR3666-201ENST00000607845 111 ntBASIC-0.34□□□□□ -2.46
NPAS2Q99743 RNY1P5-201ENST00000383890 115 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 SNORA32.3-201ENST00000384772 121 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 RNU6-935P-201ENST00000410371 100 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 MIR548O2-201ENST00000616090 70 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 MIR548AZ-201ENST00000616567 95 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 MIR3914-2-201ENST00000637339 95 ntBASIC-0.35□□□□□ -2.47
NPAS2Q99743 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.35□□□□□ -2.47
NPAS2Q99743 RNY3P2-201ENST00000362918 102 ntBASIC-0.36□□□□□ -2.47
NPAS2Q99743 MIR451A-201ENST00000385059 72 ntBASIC-0.36□□□□□ -2.47
NPAS2Q99743 RNA5SP300-201ENST00000391197 107 ntBASIC-0.36□□□□□ -2.47
NPAS2Q99743 RNU6-762P-201ENST00000517107 102 ntBASIC-0.36□□□□□ -2.47
NPAS2Q99743 RNY1P9-201ENST00000532431 109 ntBASIC-0.36□□□□□ -2.47
NPAS2Q99743 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-0.36□□□□□ -2.47
NPAS2Q99743 MIR4788-201ENST00000639104 80 ntBASIC-0.36□□□□□ -2.47
NPAS2Q99743 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.37□□□□□ -2.47
NPAS2Q99743 Y_RNA.218-201ENST00000364218 104 ntBASIC-0.37□□□□□ -2.47
NPAS2Q99743 RNU6-54P-201ENST00000365563 107 ntBASIC-0.37□□□□□ -2.47
NPAS2Q99743 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.37□□□□□ -2.47
NPAS2Q99743 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.37□□□□□ -2.47
NPAS2Q99743 AL513043.2-201ENST00000573941 143 ntBASIC-0.37□□□□□ -2.47
NPAS2Q99743 MIR20A-201ENST00000362279 71 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 SNORD50.2-201ENST00000365465 70 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 RNU6-80P-201ENST00000384195 107 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 RNU7-85P-201ENST00000458851 63 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 RNU6-65P-201ENST00000516332 98 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 MIR5009-201ENST00000578736 100 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 MIR548AX-201ENST00000580117 73 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 MIR4263-201ENST00000584745 83 ntBASIC-0.38□□□□□ -2.47
NPAS2Q99743 RNU6-455P-201ENST00000384681 107 ntBASIC-0.39□□□□□ -2.47
NPAS2Q99743 MIR548A3-201ENST00000385297 97 ntBASIC-0.39□□□□□ -2.47
NPAS2Q99743 AP000676.1-201ENST00000533307 52 ntBASIC-0.39□□□□□ -2.47
NPAS2Q99743 MIR4536-1-201ENST00000583537 88 ntBASIC-0.39□□□□□ -2.47
NPAS2Q99743 MIR548Z-201ENST00000584743 97 ntBASIC-0.39□□□□□ -2.47
NPAS2Q99743 Y_RNA.71-201ENST00000362892 104 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 SNORD114-11-201ENST00000363738 75 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 MIR216B-201ENST00000390186 82 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 AC244090.1-201ENST00000441884 93 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 FGF7P7-201ENST00000514120 227 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 RNU6-659P-201ENST00000516454 104 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 RNU6-719P-201ENST00000516671 104 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 AC103810.7-201ENST00000607821 91 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 AL590491.3-201ENST00000610731 82 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.4□□□□□ -2.47
NPAS2Q99743 SNORD45B-201ENST00000364617 72 ntBASIC-0.41□□□□□ -2.48
NPAS2Q99743 RNU6-132P-201ENST00000383863 107 ntBASIC-0.41□□□□□ -2.48
NPAS2Q99743 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.41□□□□□ -2.48
NPAS2Q99743 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.41□□□□□ -2.48
NPAS2Q99743 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.41□□□□□ -2.48
NPAS2Q99743 uc_338.36-201ENST00000622331 158 ntBASIC-0.41□□□□□ -2.48
NPAS2Q99743 U6.95-201ENST00000636931 70 ntBASIC-0.41□□□□□ -2.48
NPAS2Q99743 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 RNU6-774P-201ENST00000363238 107 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 MIR582-201ENST00000365731 98 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 MIR9-2-201ENST00000384838 87 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 SNORA49-201ENST00000386157 136 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 RNU6-795P-201ENST00000516323 103 ntBASIC-0.42□□□□□ -2.48
NPAS2Q99743 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.42□□□□□ -2.48
NPAS2Q99743 RNU6-209P-201ENST00000384118 107 ntBASIC-0.43□□□□□ -2.48
NPAS2Q99743 RNU6-813P-201ENST00000384691 107 ntBASIC-0.43□□□□□ -2.48
NPAS2Q99743 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
NPAS2Q99743 SNORD42B-201ENST00000458893 67 ntBASIC-0.43□□□□□ -2.48
NPAS2Q99743 SNORD126-201ENST00000459475 77 ntBASIC-0.43□□□□□ -2.48
NPAS2Q99743 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
NPAS2Q99743 MIR3133-201ENST00000583157 78 ntBASIC-0.43□□□□□ -2.48
NPAS2Q99743 MIR4439-201ENST00000583746 80 ntBASIC-0.43□□□□□ -2.48
NPAS2Q99743 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
NPAS2Q99743 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.44□□□□□ -2.48
NPAS2Q99743 AC097510.1-201ENST00000510945 133 ntBASIC-0.44□□□□□ -2.48
NPAS2Q99743 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 MIR196A2-201ENST00000385189 110 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 U3.27-201ENST00000391237 200 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 MIR548I1-201ENST00000408810 149 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 AL445193.1-201ENST00000441183 141 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 MIR3671-201ENST00000580455 88 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 MIR3140-201ENST00000583685 90 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 MIR4777-201ENST00000583710 86 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 AC145423.2-201ENST00000610631 239 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 AC012531.4-201ENST00000616509 177 ntBASIC-0.45□□□□□ -2.48
NPAS2Q99743 SNORD115-25-201ENST00000362619 82 ntBASIC-0.46□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms