Protein–RNA interactions for Protein: Q96K76

USP47, Ubiquitin carboxyl-terminal hydrolase 47, humanhuman

Predictions only

Length 1,375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP47Q96K76 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.23□□□□□ -2.61
USP47Q96K76 U3.27-201ENST00000391237 200 ntBASIC-1.23□□□□□ -2.61
USP47Q96K76 SNORD22.1-201ENST00000516331 125 ntBASIC-1.23□□□□□ -2.61
USP47Q96K76 RNU6-1234P-201ENST00000516877 103 ntBASIC-1.23□□□□□ -2.61
USP47Q96K76 AC072026.1-201ENST00000605023 201 ntBASIC-1.23□□□□□ -2.61
USP47Q96K76 AL442128.1-201ENST00000615151 90 ntBASIC-1.23□□□□□ -2.61
USP47Q96K76 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.24□□□□□ -2.61
USP47Q96K76 MIR568-201ENST00000385036 95 ntBASIC-1.24□□□□□ -2.61
USP47Q96K76 MTCYBP9-201ENST00000431021 303 ntBASIC-1.24□□□□□ -2.61
USP47Q96K76 MIR6854-201ENST00000614935 69 ntBASIC-1.24□□□□□ -2.61
USP47Q96K76 AC141273.2-201ENST00000618989 130 ntBASIC-1.24□□□□□ -2.61
USP47Q96K76 MIR365A-201ENST00000362260 87 ntBASIC-1.25□□□□□ -2.61
USP47Q96K76 RNU6-647P-201ENST00000364243 107 ntBASIC-1.25□□□□□ -2.61
USP47Q96K76 RNU6-738P-201ENST00000384531 106 ntBASIC-1.25□□□□□ -2.61
USP47Q96K76 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.25□□□□□ -2.61
USP47Q96K76 RNU7-197P-201ENST00000458836 62 ntBASIC-1.25□□□□□ -2.61
USP47Q96K76 SNORD42B-201ENST00000458893 67 ntBASIC-1.25□□□□□ -2.61
USP47Q96K76 RNU6-719P-201ENST00000516671 104 ntBASIC-1.25□□□□□ -2.61
USP47Q96K76 Y_RNA.344-201ENST00000365381 112 ntBASIC-1.26□□□□□ -2.61
USP47Q96K76 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.26□□□□□ -2.61
USP47Q96K76 MIR517B-201ENST00000385102 67 ntBASIC-1.27□□□□□ -2.61
USP47Q96K76 Y_RNA.674-201ENST00000516362 113 ntBASIC-1.27□□□□□ -2.61
USP47Q96K76 MIR8068-201ENST00000618032 68 ntBASIC-1.27□□□□□ -2.61
USP47Q96K76 RNA5SP192-201ENST00000364404 120 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 AP000533.3-201ENST00000447704 118 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 AC022137.1-201ENST00000483735 151 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 MIR3115-201ENST00000577915 68 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 snoR1.1-201ENST00000628177 80 ntBASIC-1.28□□□□□ -2.61
USP47Q96K76 RNU6-151P-201ENST00000364158 107 ntBASIC-1.29□□□□□ -2.62
USP47Q96K76 Y_RNA.240-201ENST00000364469 95 ntBASIC-1.29□□□□□ -2.62
USP47Q96K76 RNU6-75P-201ENST00000515944 104 ntBASIC-1.29□□□□□ -2.62
USP47Q96K76 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.29□□□□□ -2.62
USP47Q96K76 MIR3165-201ENST00000579874 75 ntBASIC-1.29□□□□□ -2.62
USP47Q96K76 MIR4536-1-201ENST00000583537 88 ntBASIC-1.29□□□□□ -2.62
USP47Q96K76 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 RNY4P6-201ENST00000363667 96 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 Y_RNA.272-201ENST00000364696 102 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 SNORD74.6-201ENST00000364796 70 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 FGF7P7-201ENST00000514120 227 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 RNU6-65P-201ENST00000516332 98 ntBASIC-1.3□□□□□ -2.62
USP47Q96K76 SNORA63-201ENST00000363450 132 ntBASIC-1.31□□□□□ -2.62
USP47Q96K76 RNU6-816P-201ENST00000390914 107 ntBASIC-1.31□□□□□ -2.62
USP47Q96K76 RNU6-1268P-201ENST00000391214 107 ntBASIC-1.31□□□□□ -2.62
USP47Q96K76 RNU6-1239P-201ENST00000391310 107 ntBASIC-1.31□□□□□ -2.62
USP47Q96K76 SCARNA18B-201ENST00000458806 135 ntBASIC-1.31□□□□□ -2.62
USP47Q96K76 AC140658.3-201ENST00000567603 271 ntBASIC-1.31□□□□□ -2.62
USP47Q96K76 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.32□□□□□ -2.62
USP47Q96K76 Y_RNA.307-201ENST00000365022 117 ntBASIC-1.32□□□□□ -2.62
USP47Q96K76 MIR4306-201ENST00000583390 91 ntBASIC-1.32□□□□□ -2.62
USP47Q96K76 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.33□□□□□ -2.62
USP47Q96K76 Y_RNA.297-201ENST00000364950 91 ntBASIC-1.33□□□□□ -2.62
USP47Q96K76 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.33□□□□□ -2.62
USP47Q96K76 MIR513C-201ENST00000401352 84 ntBASIC-1.33□□□□□ -2.62
USP47Q96K76 Y_RNA.778-201ENST00000620203 90 ntBASIC-1.33□□□□□ -2.62
USP47Q96K76 AC025521.1-201ENST00000621624 286 ntBASIC-1.33□□□□□ -2.62
USP47Q96K76 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 Y_RNA.662-201ENST00000516028 97 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 RNU6-781P-201ENST00000516377 101 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 RNU6-861P-201ENST00000516745 106 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 MIR6773-201ENST00000612812 74 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 Y_RNA.604-201ENST00000410574 102 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 AL158147.1-201ENST00000443970 75 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 AL118496.2-201ENST00000448300 230 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 AP001340.1-201ENST00000624405 217 ntBASIC-1.34□□□□□ -2.62
USP47Q96K76 MIR4441-201ENST00000582623 100 ntBASIC-1.35□□□□□ -2.63
USP47Q96K76 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.35□□□□□ -2.63
USP47Q96K76 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.36□□□□□ -2.63
USP47Q96K76 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.36□□□□□ -2.63
USP47Q96K76 SNORD50.2-201ENST00000365465 70 ntBASIC-1.37□□□□□ -2.63
USP47Q96K76 RNU6-905P-201ENST00000384434 107 ntBASIC-1.37□□□□□ -2.63
USP47Q96K76 SNORD64-201ENST00000386683 67 ntBASIC-1.37□□□□□ -2.63
USP47Q96K76 RNU6-337P-201ENST00000391243 106 ntBASIC-1.37□□□□□ -2.63
USP47Q96K76 MIR1285-2-201ENST00000408311 88 ntBASIC-1.37□□□□□ -2.63
USP47Q96K76 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.38□□□□□ -2.63
USP47Q96K76 RNU6-431P-201ENST00000383874 107 ntBASIC-1.38□□□□□ -2.63
USP47Q96K76 SNORD18.2-201ENST00000459604 70 ntBASIC-1.38□□□□□ -2.63
USP47Q96K76 SNORA81.3-201ENST00000517283 198 ntBASIC-1.38□□□□□ -2.63
USP47Q96K76 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.39□□□□□ -2.63
USP47Q96K76 SNORA63.6-201ENST00000364921 119 ntBASIC-1.39□□□□□ -2.63
USP47Q96K76 MIR577-201ENST00000385196 96 ntBASIC-1.39□□□□□ -2.63
USP47Q96K76 RNU6-592P-201ENST00000411333 103 ntBASIC-1.39□□□□□ -2.63
USP47Q96K76 MIRLET7B-201ENST00000385140 83 ntBASIC-1.4□□□□□ -2.63
USP47Q96K76 RNU7-85P-201ENST00000458851 63 ntBASIC-1.4□□□□□ -2.63
USP47Q96K76 RNU6-706P-201ENST00000517229 104 ntBASIC-1.4□□□□□ -2.63
USP47Q96K76 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.4□□□□□ -2.63
USP47Q96K76 AC025166.1-201ENST00000612411 163 ntBASIC-1.4□□□□□ -2.63
USP47Q96K76 RNU6-495P-201ENST00000362995 107 ntBASIC-1.41□□□□□ -2.64
USP47Q96K76 RNU6-682P-201ENST00000363843 106 ntBASIC-1.41□□□□□ -2.64
USP47Q96K76 RNU6-1130P-201ENST00000365434 107 ntBASIC-1.41□□□□□ -2.64
USP47Q96K76 RNU7-120P-201ENST00000459334 63 ntBASIC-1.41□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms