Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 SNORD50.2-201ENST00000365465 70 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 RNU6-35P-201ENST00000384530 107 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 SNORD2-201ENST00000459163 69 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 RNU6-762P-201ENST00000517107 102 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 MIR4536-1-201ENST00000583537 88 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 AC145423.2-201ENST00000610631 239 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.67□□□□□ -2.52
VMP1Q96GC9 SNORD114-4-201ENST00000363962 75 ntBASIC-0.68□□□□□ -2.52
VMP1Q96GC9 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.68□□□□□ -2.52
VMP1Q96GC9 RNU6-901P-201ENST00000384593 106 ntBASIC-0.68□□□□□ -2.52
VMP1Q96GC9 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.68□□□□□ -2.52
VMP1Q96GC9 RNU6-257P-201ENST00000410238 98 ntBASIC-0.68□□□□□ -2.52
VMP1Q96GC9 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.69□□□□□ -2.52
VMP1Q96GC9 AL445193.1-201ENST00000441183 141 ntBASIC-0.69□□□□□ -2.52
VMP1Q96GC9 AC068339.1-201ENST00000526965 141 ntBASIC-0.69□□□□□ -2.52
VMP1Q96GC9 AL513043.2-201ENST00000573941 143 ntBASIC-0.69□□□□□ -2.52
VMP1Q96GC9 MIR4439-201ENST00000583746 80 ntBASIC-0.69□□□□□ -2.52
VMP1Q96GC9 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 SNORD56B-201ENST00000384713 71 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 MIR548E-201ENST00000408287 88 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 RNU7-85P-201ENST00000458851 63 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 RNU7-55P-201ENST00000459426 62 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 RNA5SP395-201ENST00000516567 118 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 SNORA40.17-201ENST00000517256 115 ntBASIC-0.7□□□□□ -2.52
VMP1Q96GC9 Y_RNA.353-201ENST00000365440 108 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 MIR582-201ENST00000365731 98 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 MIR604-201ENST00000384880 94 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 snoU13.13-201ENST00000458842 104 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 RNU7-107P-201ENST00000459121 61 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 MIR3613-201ENST00000579844 87 ntBASIC-0.71□□□□□ -2.52
VMP1Q96GC9 SNORD45B-201ENST00000364617 72 ntBASIC-0.72□□□□□ -2.52
VMP1Q96GC9 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.72□□□□□ -2.52
VMP1Q96GC9 MIR224-201ENST00000384889 81 ntBASIC-0.72□□□□□ -2.52
VMP1Q96GC9 Z95118.1-201ENST00000421372 247 ntBASIC-0.72□□□□□ -2.52
VMP1Q96GC9 FGF7P7-201ENST00000514120 227 ntBASIC-0.72□□□□□ -2.52
VMP1Q96GC9 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.72□□□□□ -2.52
VMP1Q96GC9 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.73□□□□□ -2.53
VMP1Q96GC9 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.73□□□□□ -2.53
VMP1Q96GC9 SNORD42B-201ENST00000458893 67 ntBASIC-0.73□□□□□ -2.53
VMP1Q96GC9 RNU6-719P-201ENST00000516671 104 ntBASIC-0.73□□□□□ -2.53
VMP1Q96GC9 RNA5SP169-201ENST00000517268 117 ntBASIC-0.73□□□□□ -2.53
VMP1Q96GC9 MIR5009-201ENST00000578736 100 ntBASIC-0.73□□□□□ -2.53
VMP1Q96GC9 MIR4280-201ENST00000582178 76 ntBASIC-0.73□□□□□ -2.53
VMP1Q96GC9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.74□□□□□ -2.53
VMP1Q96GC9 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.74□□□□□ -2.53
VMP1Q96GC9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.74□□□□□ -2.53
VMP1Q96GC9 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.74□□□□□ -2.53
VMP1Q96GC9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.74□□□□□ -2.53
VMP1Q96GC9 MIR3914-2-201ENST00000637339 95 ntBASIC-0.74□□□□□ -2.53
VMP1Q96GC9 RNU6-132P-201ENST00000383863 107 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 RNY1P5-201ENST00000383890 115 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 RNU6-813P-201ENST00000384691 107 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 MIR204-201ENST00000385200 110 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 MIR548U-201ENST00000390728 81 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 RNU6-644P-201ENST00000391155 98 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 SNORA3B-201ENST00000391305 131 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 RNU6-971P-201ENST00000516920 106 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 MIR6851-201ENST00000617060 67 ntBASIC-0.75□□□□□ -2.53
VMP1Q96GC9 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 MIR548A1-201ENST00000385041 97 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 snosnR66.1-201ENST00000391095 99 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.76□□□□□ -2.53
VMP1Q96GC9 MIR1265-201ENST00000408444 86 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 AC097510.1-201ENST00000510945 133 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 RNU6-346P-201ENST00000516288 111 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 Y_RNA.712-201ENST00000517011 92 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 AC103810.7-201ENST00000607821 91 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 AL391099.1-201ENST00000624635 187 ntBASIC-0.76□□□□□ -2.53
VMP1Q96GC9 SNORA63.2-201ENST00000362603 126 ntBASIC-0.77□□□□□ -2.53
VMP1Q96GC9 RNU6-973P-201ENST00000364690 107 ntBASIC-0.77□□□□□ -2.53
VMP1Q96GC9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.77□□□□□ -2.53
VMP1Q96GC9 SNORD33.1-201ENST00000516213 88 ntBASIC-0.77□□□□□ -2.53
VMP1Q96GC9 RNU6-255P-201ENST00000516957 105 ntBASIC-0.77□□□□□ -2.53
VMP1Q96GC9 MIR3064-201ENST00000581130 66 ntBASIC-0.77□□□□□ -2.53
VMP1Q96GC9 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 RNU6-502P-201ENST00000362419 108 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 RNU6-80P-201ENST00000384195 107 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 Y_RNA.586-201ENST00000391146 98 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 MIR3681-201ENST00000580089 72 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 AC108676.2-201ENST00000605225 163 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 U6.95-201ENST00000636931 70 ntBASIC-0.78□□□□□ -2.53
VMP1Q96GC9 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 RNU6-476P-201ENST00000384726 107 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 MIR548A3-201ENST00000385297 97 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-0.79□□□□□ -2.54
VMP1Q96GC9 SNORD4B-201ENST00000459083 72 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 AC021146.6-201ENST00000514659 117 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 AC104996.3-201ENST00000590718 94 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 AC090425.1-201ENST00000610007 140 ntBASIC-0.79□□□□□ -2.54
VMP1Q96GC9 SNORA13-201ENST00000458790 133 ntBASIC-0.8□□□□□ -2.54
VMP1Q96GC9 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.8□□□□□ -2.54
VMP1Q96GC9 MIR3140-201ENST00000583685 90 ntBASIC-0.8□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 183.3 ms