Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 RNA5SP247-201ENST00000411181 105 ntBASIC0.69□□□□□ -2.3
FOXRED1Q96CU9 RNU6-557P-201ENST00000516842 110 ntBASIC0.69□□□□□ -2.3
FOXRED1Q96CU9 AC018659.1-201ENST00000551083 169 ntBASIC0.69□□□□□ -2.3
FOXRED1Q96CU9 MIR3973-201ENST00000579824 107 ntBASIC0.69□□□□□ -2.3
FOXRED1Q96CU9 SNORA25.18-201ENST00000607153 114 ntBASIC0.69□□□□□ -2.3
FOXRED1Q96CU9 RNU6-208P-201ENST00000362431 107 ntBASIC0.68□□□□□ -2.3
FOXRED1Q96CU9 SNORD114-22-201ENST00000365423 72 ntBASIC0.68□□□□□ -2.3
FOXRED1Q96CU9 MIR518A1-201ENST00000385068 85 ntBASIC0.68□□□□□ -2.3
FOXRED1Q96CU9 SNORD90-201ENST00000391145 111 ntBASIC0.68□□□□□ -2.3
FOXRED1Q96CU9 MIR1287-201ENST00000408492 90 ntBASIC0.68□□□□□ -2.3
FOXRED1Q96CU9 MIR6767-201ENST00000637302 66 ntBASIC0.68□□□□□ -2.3
FOXRED1Q96CU9 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.67□□□□□ -2.3
FOXRED1Q96CU9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC0.67□□□□□ -2.3
FOXRED1Q96CU9 AC093423.1-201ENST00000440817 142 ntBASIC0.67□□□□□ -2.3
FOXRED1Q96CU9 MIR1245B-201ENST00000636115 69 ntBASIC0.67□□□□□ -2.3
FOXRED1Q96CU9 RNU6-161P-201ENST00000363051 106 ntBASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 RNU6-686P-201ENST00000364839 107 ntBASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 RNU2-59P-201ENST00000410482 191 ntBASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 RNA5SP484-201ENST00000458857 111 ntBASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 AC097510.1-201ENST00000510945 133 ntBASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 RNU6-1108P-201ENST00000516308 104 ntBASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 MIR548O2-201ENST00000616090 70 ntBASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
FOXRED1Q96CU9 RNU6-315P-201ENST00000362666 107 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 RNU6-945P-201ENST00000383947 107 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 RNU6-1124P-201ENST00000384169 107 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 MT-TY-201ENST00000387409 66 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 SNORD78.1-201ENST00000390866 65 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 RNU6-1177P-201ENST00000391058 104 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 AC006210.1-201ENST00000424882 111 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 NAMPTP3-201ENST00000569273 224 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 MIR151B-201ENST00000584249 96 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 AL078603.1-201ENST00000603824 313 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 AC069503.3-201ENST00000618674 145 ntBASIC0.65□□□□□ -2.31
FOXRED1Q96CU9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
FOXRED1Q96CU9 MIR373-201ENST00000362273 69 ntBASIC0.64□□□□□ -2.31
FOXRED1Q96CU9 MIR520E-201ENST00000384867 87 ntBASIC0.64□□□□□ -2.31
FOXRED1Q96CU9 AC069271.1-201ENST00000445577 156 ntBASIC0.64□□□□□ -2.31
FOXRED1Q96CU9 snoU13.17-201ENST00000458802 104 ntBASIC0.64□□□□□ -2.31
FOXRED1Q96CU9 RNA5SP121-201ENST00000516537 101 ntBASIC0.64□□□□□ -2.31
FOXRED1Q96CU9 MIR6788-201ENST00000618842 66 ntBASIC0.64□□□□□ -2.31
FOXRED1Q96CU9 SNORA24B-201ENST00000384176 131 ntBASIC0.63□□□□□ -2.31
FOXRED1Q96CU9 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
FOXRED1Q96CU9 SNORD110-201ENST00000408189 75 ntBASIC0.63□□□□□ -2.31
FOXRED1Q96CU9 AC098934.3-201ENST00000430450 190 ntBASIC0.63□□□□□ -2.31
FOXRED1Q96CU9 RNU4ATAC4P-201ENST00000516307 126 ntBASIC0.63□□□□□ -2.31
FOXRED1Q96CU9 MIR5706-201ENST00000579841 80 ntBASIC0.63□□□□□ -2.31
FOXRED1Q96CU9 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.63□□□□□ -2.31
FOXRED1Q96CU9 RNU6-681P-201ENST00000364012 104 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 Y_RNA.313-201ENST00000365095 103 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 RNU6-787P-201ENST00000384032 107 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 RPS29P1-201ENST00000465274 159 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 RNU6-863P-201ENST00000515989 104 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 RNU4-54P-201ENST00000516428 129 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 CYP3A137P-201ENST00000562436 69 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 U7.6-201ENST00000610841 64 ntBASIC0.62□□□□□ -2.31
FOXRED1Q96CU9 RNU6-1094P-201ENST00000362416 104 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNU6V-201ENST00000384105 107 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNU6-848P-201ENST00000515948 107 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNU6-617P-201ENST00000516147 107 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNU6-473P-201ENST00000516164 107 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNA5SP220-201ENST00000516298 104 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNU6-1049P-201ENST00000516414 107 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 YWHAEP2-201ENST00000580066 112 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 YWHAEP3-201ENST00000582767 121 ntBASIC0.61□□□□□ -2.31
FOXRED1Q96CU9 RNU6-478P-201ENST00000363904 110 ntBASIC0.6□□□□□ -2.31
FOXRED1Q96CU9 SNORA2A-201ENST00000383885 135 ntBASIC0.6□□□□□ -2.31
FOXRED1Q96CU9 MIR4752-201ENST00000579672 72 ntBASIC0.6□□□□□ -2.31
FOXRED1Q96CU9 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.6□□□□□ -2.31
FOXRED1Q96CU9 MIRLET7A1-201ENST00000362295 80 ntBASIC0.59□□□□□ -2.31
FOXRED1Q96CU9 Y_RNA.12-201ENST00000362393 112 ntBASIC0.59□□□□□ -2.31
FOXRED1Q96CU9 RNU6-228P-201ENST00000362700 106 ntBASIC0.59□□□□□ -2.31
FOXRED1Q96CU9 Y_RNA.685-201ENST00000516532 108 ntBASIC0.59□□□□□ -2.31
FOXRED1Q96CU9 RNU6-229P-201ENST00000516614 102 ntBASIC0.59□□□□□ -2.31
FOXRED1Q96CU9 MIR4712-201ENST00000583750 82 ntBASIC0.59□□□□□ -2.31
FOXRED1Q96CU9 MIR6835-201ENST00000621552 64 ntBASIC0.59□□□□□ -2.31
FOXRED1Q96CU9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 Y_RNA.371-201ENST00000365591 113 ntBASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 MIR1255A-201ENST00000408338 113 ntBASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 MIR548J-201ENST00000408833 112 ntBASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 Y_RNA.606-201ENST00000410579 103 ntBASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 RNU6-1223P-201ENST00000517124 104 ntBASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 SNORA70.25-201ENST00000612741 95 ntBASIC0.58□□□□□ -2.32
FOXRED1Q96CU9 SNORD114-4-201ENST00000363962 75 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 Y_RNA.423-201ENST00000384057 113 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 MIR508-201ENST00000384857 115 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 RNU5B-6P-201ENST00000516765 68 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 RNU6-807P-201ENST00000516805 107 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 U6.81-201ENST00000612550 106 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 MIR1297-201ENST00000637311 77 ntBASIC0.57□□□□□ -2.32
FOXRED1Q96CU9 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 RNU6-340P-201ENST00000364005 107 ntBASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 RNU6-42P-201ENST00000384165 107 ntBASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 SNORD75.2-201ENST00000408784 58 ntBASIC0.56□□□□□ -2.32
FOXRED1Q96CU9 RNU7-24P-201ENST00000458867 62 ntBASIC0.56□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 214 ms