Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 RNU7-56P-201ENST00000458744 62 ntBASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 AC023827.1-201ENST00000569247 97 ntBASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 MIR4773-1-201ENST00000637203 78 ntBASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SH3RF3Q8TEJ3 RNA5SP403-201ENST00000363598 108 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 MIR633-201ENST00000384821 98 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 AC079150.2-201ENST00000443733 78 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 RNU7-21P-201ENST00000459430 62 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 SNORA31.2-201ENST00000516019 134 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-752P-201ENST00000516376 102 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-977P-201ENST00000516411 103 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 MIR4804-201ENST00000581683 73 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 uc_338.16-201ENST00000621804 95 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 AC027335.2-201ENST00000624030 375 ntBASIC1.32□□□□□ -2.2
SH3RF3Q8TEJ3 MIR938-201ENST00000401216 83 ntBASIC1.31□□□□□ -2.2
SH3RF3Q8TEJ3 AC087343.1-201ENST00000477341 475 ntBASIC1.31□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.31□□□□□ -2.2
SH3RF3Q8TEJ3 SNORA40.17-201ENST00000517256 115 ntBASIC1.31□□□□□ -2.2
SH3RF3Q8TEJ3 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.31□□□□□ -2.2
SH3RF3Q8TEJ3 Y_RNA.32-201ENST00000362589 110 ntBASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-495P-201ENST00000362995 107 ntBASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-1126P-201ENST00000384002 107 ntBASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 AC244098.3-201ENST00000424803 96 ntBASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 SNORA31.14-201ENST00000516728 116 ntBASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 RNU7-161P-201ENST00000517289 62 ntBASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 MIR3920-201ENST00000581751 86 ntBASIC1.3□□□□□ -2.2
SH3RF3Q8TEJ3 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
SH3RF3Q8TEJ3 SNORD115-44-201ENST00000365391 82 ntBASIC1.29□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-364P-201ENST00000384387 107 ntBASIC1.29□□□□□ -2.2
SH3RF3Q8TEJ3 SNORD75.2-201ENST00000408784 58 ntBASIC1.29□□□□□ -2.2
SH3RF3Q8TEJ3 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
SH3RF3Q8TEJ3 RNU7-24P-201ENST00000458867 62 ntBASIC1.29□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6-274P-201ENST00000459566 107 ntBASIC1.29□□□□□ -2.2
SH3RF3Q8TEJ3 RNA5SP327-201ENST00000362494 101 ntBASIC1.28□□□□□ -2.2
SH3RF3Q8TEJ3 MIR520E-201ENST00000384867 87 ntBASIC1.28□□□□□ -2.2
SH3RF3Q8TEJ3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.28□□□□□ -2.2
SH3RF3Q8TEJ3 NAMPTP3-201ENST00000569273 224 ntBASIC1.28□□□□□ -2.2
SH3RF3Q8TEJ3 SNORD114-21-201ENST00000606412 72 ntBASIC1.28□□□□□ -2.2
SH3RF3Q8TEJ3 Y_RNA.30-201ENST00000362572 97 ntBASIC1.27□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6-1039P-201ENST00000383931 107 ntBASIC1.27□□□□□ -2.21
SH3RF3Q8TEJ3 SNORD79.1-201ENST00000516069 84 ntBASIC1.27□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6-1057P-201ENST00000517162 102 ntBASIC1.27□□□□□ -2.21
SH3RF3Q8TEJ3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6-829P-201ENST00000363700 112 ntBASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6-141P-201ENST00000410499 105 ntBASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 RPS29P1-201ENST00000465274 159 ntBASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 RNU7-13P-201ENST00000516413 62 ntBASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 MIR548O2-201ENST00000616090 70 ntBASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.26□□□□□ -2.21
SH3RF3Q8TEJ3 SNORD115-24-201ENST00000363528 82 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 Y_RNA.375-201ENST00000365625 101 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 SNORA25-201ENST00000384384 134 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 MIR519E-201ENST00000385075 84 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6-910P-201ENST00000390844 107 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 SNORD42B-201ENST00000458893 67 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 MIR151B-201ENST00000584249 96 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 AC069503.3-201ENST00000618674 145 ntBASIC1.25□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6-54P-201ENST00000365563 107 ntBASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 SNORA80D-201ENST00000384488 135 ntBASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 MIR222-201ENST00000384992 110 ntBASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 MIR617-201ENST00000385030 97 ntBASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 AL691482.2-201ENST00000457453 84 ntBASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 AC092634.7-201ENST00000621022 103 ntBASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 AC073869.9-201ENST00000641610 120 ntBASIC1.24□□□□□ -2.21
SH3RF3Q8TEJ3 Y_RNA.236-201ENST00000364427 111 ntBASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 MIR203A-201ENST00000384836 110 ntBASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 RNU1-119P-201ENST00000391122 165 ntBASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 SNORA70.22-201ENST00000517160 124 ntBASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 MIR6788-201ENST00000618842 66 ntBASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
SH3RF3Q8TEJ3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
SH3RF3Q8TEJ3 RNU6-446P-201ENST00000362827 106 ntBASIC1.22□□□□□ -2.21
SH3RF3Q8TEJ3 MIR1827-201ENST00000408549 66 ntBASIC1.22□□□□□ -2.21
SH3RF3Q8TEJ3 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
SH3RF3Q8TEJ3 MIR3657-201ENST00000584818 117 ntBASIC1.22□□□□□ -2.21
SH3RF3Q8TEJ3 MIR6509-201ENST00000614603 85 ntBASIC1.22□□□□□ -2.21
SH3RF3Q8TEJ3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SH3RF3Q8TEJ3 Y_RNA.174-201ENST00000363781 105 ntBASIC1.21□□□□□ -2.22
SH3RF3Q8TEJ3 MIR520F-201ENST00000384824 87 ntBASIC1.21□□□□□ -2.22
SH3RF3Q8TEJ3 MIR100-201ENST00000385259 80 ntBASIC1.21□□□□□ -2.22
SH3RF3Q8TEJ3 MIR1285-1-201ENST00000408593 84 ntBASIC1.21□□□□□ -2.22
SH3RF3Q8TEJ3 MIR1-1-201ENST00000362147 71 ntBASIC1.2□□□□□ -2.22
SH3RF3Q8TEJ3 MIR373-201ENST00000362273 69 ntBASIC1.2□□□□□ -2.22
SH3RF3Q8TEJ3 RNU4-38P-201ENST00000364472 129 ntBASIC1.2□□□□□ -2.22
SH3RF3Q8TEJ3 MIR548J-201ENST00000408833 112 ntBASIC1.2□□□□□ -2.22
SH3RF3Q8TEJ3 RNU6-994P-201ENST00000410507 111 ntBASIC1.2□□□□□ -2.22
SH3RF3Q8TEJ3 AC067940.1-201ENST00000458411 300 ntBASIC1.2□□□□□ -2.22
SH3RF3Q8TEJ3 RNU7-104P-201ENST00000459398 79 ntBASIC1.2□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 299.1 ms