Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIR3612-201ENST00000579753 87 ntBASIC1.16□□□□□ -2.22
NUP43Q8NFH3 MIR6515-201ENST00000619843 57 ntBASIC1.16□□□□□ -2.22
NUP43Q8NFH3 AC067863.3-201ENST00000624172 122 ntBASIC1.16□□□□□ -2.22
NUP43Q8NFH3 Y_RNA.258-201ENST00000364613 105 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 SNORD114-24-201ENST00000365029 72 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 MIR519E-201ENST00000385075 84 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 RNU6-1177P-201ENST00000391058 104 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 RNU6-70P-201ENST00000516438 60 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 Y_RNA.681-201ENST00000516445 113 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 RNU6-1015P-201ENST00000517121 99 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 RNA5SP47-201ENST00000517230 109 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 MIR3678-201ENST00000578455 94 ntBASIC1.15□□□□□ -2.23
NUP43Q8NFH3 SNORD41.1-201ENST00000391000 69 ntBASIC1.14□□□□□ -2.23
NUP43Q8NFH3 RNU6-687P-201ENST00000516443 89 ntBASIC1.14□□□□□ -2.23
NUP43Q8NFH3 AC025627.3-201ENST00000582078 182 ntBASIC1.14□□□□□ -2.23
NUP43Q8NFH3 MIR6779-201ENST00000617283 64 ntBASIC1.14□□□□□ -2.23
NUP43Q8NFH3 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
NUP43Q8NFH3 RNU6-681P-201ENST00000364012 104 ntBASIC1.13□□□□□ -2.23
NUP43Q8NFH3 MIR618-201ENST00000385287 98 ntBASIC1.13□□□□□ -2.23
NUP43Q8NFH3 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.13□□□□□ -2.23
NUP43Q8NFH3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
NUP43Q8NFH3 SNORA8.1-201ENST00000384250 140 ntBASIC1.12□□□□□ -2.23
NUP43Q8NFH3 MIR598-201ENST00000384868 97 ntBASIC1.12□□□□□ -2.23
NUP43Q8NFH3 RNU6-1223P-201ENST00000517124 104 ntBASIC1.12□□□□□ -2.23
NUP43Q8NFH3 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.12□□□□□ -2.23
NUP43Q8NFH3 RNA5SP325-201ENST00000363756 130 ntBASIC1.11□□□□□ -2.23
NUP43Q8NFH3 RNU6-726P-201ENST00000364680 107 ntBASIC1.11□□□□□ -2.23
NUP43Q8NFH3 MIR548O2-201ENST00000616090 70 ntBASIC1.11□□□□□ -2.23
NUP43Q8NFH3 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.11□□□□□ -2.23
NUP43Q8NFH3 RNU1-93P-201ENST00000364704 169 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 RNU6-382P-201ENST00000365181 106 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
NUP43Q8NFH3 MIR216B-201ENST00000390186 82 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 RNU6-587P-201ENST00000391282 106 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 SNORD99-201ENST00000408612 74 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 AC244098.3-201ENST00000424803 96 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 AC093423.1-201ENST00000440817 142 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 PVT1_3.1-201ENST00000620853 95 ntBASIC1.1□□□□□ -2.23
NUP43Q8NFH3 RNU6-634P-201ENST00000459134 106 ntBASIC1.09□□□□□ -2.23
NUP43Q8NFH3 SCARNA16.5-201ENST00000517114 183 ntBASIC1.09□□□□□ -2.23
NUP43Q8NFH3 MIR4773-1-201ENST00000637203 78 ntBASIC1.09□□□□□ -2.23
NUP43Q8NFH3 MIR18A-201ENST00000362310 71 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 RNU6-1241P-201ENST00000384536 107 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 RNU7-74P-201ENST00000459104 62 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 AC114801.3-201ENST00000510231 177 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 AC011195.1-201ENST00000578177 177 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 MIR3675-201ENST00000583661 73 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 MIR151B-201ENST00000584249 96 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.08□□□□□ -2.24
NUP43Q8NFH3 MIR96-201ENST00000362288 78 ntBASIC1.07□□□□□ -2.24
NUP43Q8NFH3 RNU6-495P-201ENST00000362995 107 ntBASIC1.07□□□□□ -2.24
NUP43Q8NFH3 RNU6-716P-201ENST00000365621 103 ntBASIC1.07□□□□□ -2.24
NUP43Q8NFH3 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
NUP43Q8NFH3 MIR548L-201ENST00000408303 86 ntBASIC1.07□□□□□ -2.24
NUP43Q8NFH3 SNORD75.2-201ENST00000408784 58 ntBASIC1.07□□□□□ -2.24
NUP43Q8NFH3 MIR6788-201ENST00000618842 66 ntBASIC1.07□□□□□ -2.24
NUP43Q8NFH3 MIR6828-201ENST00000636181 60 ntBASIC1.07□□□□□ -2.24
NUP43Q8NFH3 MIR1285-1-201ENST00000408593 84 ntBASIC1.06□□□□□ -2.24
NUP43Q8NFH3 RNU7-24P-201ENST00000458867 62 ntBASIC1.06□□□□□ -2.24
NUP43Q8NFH3 RNU6-274P-201ENST00000459566 107 ntBASIC1.06□□□□□ -2.24
NUP43Q8NFH3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.06□□□□□ -2.24
NUP43Q8NFH3 RNU6-871P-201ENST00000516122 100 ntBASIC1.06□□□□□ -2.24
NUP43Q8NFH3 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.06□□□□□ -2.24
NUP43Q8NFH3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.06□□□□□ -2.24
NUP43Q8NFH3 RNU6-54P-201ENST00000365563 107 ntBASIC1.05□□□□□ -2.24
NUP43Q8NFH3 MIR520E-201ENST00000384867 87 ntBASIC1.05□□□□□ -2.24
NUP43Q8NFH3 RNU6-752P-201ENST00000516376 102 ntBASIC1.05□□□□□ -2.24
NUP43Q8NFH3 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.05□□□□□ -2.24
NUP43Q8NFH3 SNORA36.1-201ENST00000363424 132 ntBASIC1.04□□□□□ -2.24
NUP43Q8NFH3 RNU6-269P-201ENST00000391077 97 ntBASIC1.04□□□□□ -2.24
NUP43Q8NFH3 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.04□□□□□ -2.24
NUP43Q8NFH3 NAMPTP3-201ENST00000569273 224 ntBASIC1.04□□□□□ -2.24
NUP43Q8NFH3 SNORD115-31-201ENST00000365318 82 ntBASIC1.03□□□□□ -2.24
NUP43Q8NFH3 RNU6V-201ENST00000384105 107 ntBASIC1.03□□□□□ -2.24
NUP43Q8NFH3 MT-TY-201ENST00000387409 66 ntBASIC1.03□□□□□ -2.24
NUP43Q8NFH3 RPS29P1-201ENST00000465274 159 ntBASIC1.03□□□□□ -2.24
NUP43Q8NFH3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.02□□□□□ -2.25
NUP43Q8NFH3 RNU1-141P-201ENST00000364623 158 ntBASIC1.02□□□□□ -2.25
NUP43Q8NFH3 RNU4-45P-201ENST00000365469 141 ntBASIC1.02□□□□□ -2.25
NUP43Q8NFH3 MIR154-201ENST00000385243 84 ntBASIC1.02□□□□□ -2.25
NUP43Q8NFH3 RNU6-539P-201ENST00000516665 103 ntBASIC1.02□□□□□ -2.25
NUP43Q8NFH3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.02□□□□□ -2.25
NUP43Q8NFH3 AL353765.1-201ENST00000605514 183 ntBASIC1.02□□□□□ -2.25
NUP43Q8NFH3 AL162376.1-201ENST00000624117 175 ntBASIC1.02□□□□□ -2.25
NUP43Q8NFH3 SNORA8.2-201ENST00000384372 139 ntBASIC1.01□□□□□ -2.25
NUP43Q8NFH3 RNU6-540P-201ENST00000384622 101 ntBASIC1.01□□□□□ -2.25
NUP43Q8NFH3 MIR548J-201ENST00000408833 112 ntBASIC1.01□□□□□ -2.25
NUP43Q8NFH3 SNORD42B-201ENST00000458893 67 ntBASIC1.01□□□□□ -2.25
NUP43Q8NFH3 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
NUP43Q8NFH3 RNA5SP94-201ENST00000516917 108 ntBASIC1.01□□□□□ -2.25
NUP43Q8NFH3 Y_RNA.205-201ENST00000364128 113 ntBASIC1□□□□□ -2.25
NUP43Q8NFH3 RNA5SP484-201ENST00000458857 111 ntBASIC1□□□□□ -2.25
NUP43Q8NFH3 MIR4460-201ENST00000577862 86 ntBASIC1□□□□□ -2.25
NUP43Q8NFH3 MIR4295-201ENST00000585286 85 ntBASIC1□□□□□ -2.25
NUP43Q8NFH3 SNORD45.1-201ENST00000363181 77 ntBASIC0.99□□□□□ -2.25
NUP43Q8NFH3 RNU6-1039P-201ENST00000383931 107 ntBASIC0.99□□□□□ -2.25
NUP43Q8NFH3 RNU6-788P-201ENST00000390967 104 ntBASIC0.99□□□□□ -2.25
NUP43Q8NFH3 AL691482.2-201ENST00000457453 84 ntBASIC0.99□□□□□ -2.25
NUP43Q8NFH3 RNA5SP227-201ENST00000516184 113 ntBASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms