Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 MIR4714-201ENST00000580728 77 ntBASIC0.9□□□□□ -2.27
SLC44A4Q53GD3 FAS-AS1.1-201ENST00000615327 126 ntBASIC0.9□□□□□ -2.27
SLC44A4Q53GD3 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 Y_RNA.239-201ENST00000364444 113 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 Y_RNA.374-201ENST00000365606 101 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 MIR146A-201ENST00000385201 99 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 Y_RNA.596-201ENST00000410462 109 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 RNA5SP222-201ENST00000411039 105 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 PSMC1P5-201ENST00000512850 177 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 RNU7-161P-201ENST00000517289 62 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 MTRNR2L2-201ENST00000604882 87 ntBASIC0.89□□□□□ -2.27
SLC44A4Q53GD3 RNU6-686P-201ENST00000364839 107 ntBASIC0.88□□□□□ -2.27
SLC44A4Q53GD3 RNY1P8-201ENST00000383970 114 ntBASIC0.88□□□□□ -2.27
SLC44A4Q53GD3 SNORA24B-201ENST00000384176 131 ntBASIC0.88□□□□□ -2.27
SLC44A4Q53GD3 RNA5SP403-201ENST00000363598 108 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 Y_RNA.207-201ENST00000364142 106 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 RNU6-1052P-201ENST00000411398 104 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 RNU7-104P-201ENST00000459398 79 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 RNU6-287P-201ENST00000516230 98 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 RNU6-719P-201ENST00000516671 104 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 MIR3678-201ENST00000578455 94 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 MIR548AG2-201ENST00000581228 64 ntBASIC0.87□□□□□ -2.27
SLC44A4Q53GD3 Y_RNA.258-201ENST00000364613 105 ntBASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 RNU6-1051P-201ENST00000365471 102 ntBASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 AC074348.1-201ENST00000426503 132 ntBASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 RNU6-1015P-201ENST00000517121 99 ntBASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 U7.4-201ENST00000614961 63 ntBASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 MIR6513-201ENST00000621188 64 ntBASIC0.86□□□□□ -2.27
SLC44A4Q53GD3 SNORD28-201ENST00000384706 75 ntBASIC0.85□□□□□ -2.27
SLC44A4Q53GD3 MIR193B-201ENST00000384907 83 ntBASIC0.85□□□□□ -2.27
SLC44A4Q53GD3 DLEU2_3.1-201ENST00000620005 73 ntBASIC0.85□□□□□ -2.27
SLC44A4Q53GD3 AC244669.1-204ENST00000621564 178 ntBASIC0.85□□□□□ -2.27
SLC44A4Q53GD3 MIR18A-201ENST00000362310 71 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 RNU6-208P-201ENST00000362431 107 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 RNU6-824P-201ENST00000363724 104 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 SNORD18A-201ENST00000363753 72 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 SNORD77.2-201ENST00000391045 68 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 FGF7P7-201ENST00000514120 227 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 RNU7-13P-201ENST00000516413 62 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 RNU6-687P-201ENST00000516443 89 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 MIR3920-201ENST00000581751 86 ntBASIC0.84□□□□□ -2.27
SLC44A4Q53GD3 RNU6-1094P-201ENST00000362416 104 ntBASIC0.83□□□□□ -2.28
SLC44A4Q53GD3 SNORA36.2-201ENST00000384004 127 ntBASIC0.83□□□□□ -2.28
SLC44A4Q53GD3 MIR1273G-201ENST00000577677 100 ntBASIC0.83□□□□□ -2.28
SLC44A4Q53GD3 MIR6835-201ENST00000621552 64 ntBASIC0.83□□□□□ -2.28
SLC44A4Q53GD3 AC067863.3-201ENST00000624172 122 ntBASIC0.83□□□□□ -2.28
SLC44A4Q53GD3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.83□□□□□ -2.28
SLC44A4Q53GD3 Y_RNA.12-201ENST00000362393 112 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 SNORD115-31-201ENST00000365318 82 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 RNU6-154P-201ENST00000384306 106 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 MIR451A-201ENST00000385059 72 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 MIR936-201ENST00000401264 98 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 RNU6-935P-201ENST00000410371 100 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 MIR4639-201ENST00000584938 69 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 AL590095.2-201ENST00000604136 117 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 Evf-2_5p.1-201ENST00000614213 142 ntBASIC0.82□□□□□ -2.28
SLC44A4Q53GD3 Y_RNA.30-201ENST00000362572 97 ntBASIC0.81□□□□□ -2.28
SLC44A4Q53GD3 Y_RNA.371-201ENST00000365591 113 ntBASIC0.81□□□□□ -2.28
SLC44A4Q53GD3 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
SLC44A4Q53GD3 AC073261.1-201ENST00000429409 121 ntBASIC0.81□□□□□ -2.28
SLC44A4Q53GD3 RNA5SP47-201ENST00000517230 109 ntBASIC0.81□□□□□ -2.28
SLC44A4Q53GD3 RNU6-340P-201ENST00000364005 107 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 SNORD115-44-201ENST00000365391 82 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 RNU6-716P-201ENST00000365621 103 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 RNU6-1126P-201ENST00000384002 107 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 Y_RNA.545-201ENST00000384652 105 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 RNU6-70P-201ENST00000516438 60 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 RNU6-303P-201ENST00000517091 106 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.8□□□□□ -2.28
SLC44A4Q53GD3 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 RNU6-540P-201ENST00000384622 101 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 MIR508-201ENST00000384857 115 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 MIR548L-201ENST00000408303 86 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 AC114801.3-201ENST00000510231 177 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 Y_RNA.660-201ENST00000516002 120 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 RNU6-135P-201ENST00000516769 101 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 RNU6-1057P-201ENST00000517162 102 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 YWHAEP2-201ENST00000580066 112 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 YWHAEP3-201ENST00000582767 121 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
SLC44A4Q53GD3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.28
SLC44A4Q53GD3 SNORD114-23-201ENST00000363536 72 ntBASIC0.78□□□□□ -2.28
SLC44A4Q53GD3 RNU6-726P-201ENST00000364680 107 ntBASIC0.78□□□□□ -2.28
SLC44A4Q53GD3 RNU6-351P-201ENST00000516097 100 ntBASIC0.78□□□□□ -2.28
SLC44A4Q53GD3 U6.81-201ENST00000612550 106 ntBASIC0.78□□□□□ -2.28
SLC44A4Q53GD3 DLEU2_3.2-201ENST00000612883 73 ntBASIC0.78□□□□□ -2.28
SLC44A4Q53GD3 MIR6866-201ENST00000638146 69 ntBASIC0.78□□□□□ -2.28
SLC44A4Q53GD3 SNORA36.1-201ENST00000363424 132 ntBASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 RNY4P3-201ENST00000365254 95 ntBASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 RNU6-411P-201ENST00000384451 107 ntBASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 RNU6-1241P-201ENST00000384536 107 ntBASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 MIR519E-201ENST00000385075 84 ntBASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 Y_RNA.606-201ENST00000410579 103 ntBASIC0.77□□□□□ -2.29
SLC44A4Q53GD3 SNORA40.17-201ENST00000517256 115 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms